>ref|XM_470576.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1254

 Score =  145 bits (73), Expect = 1e-31
 Identities = 103/113 (91%)
 Strand = Plus / Minus

                                                                        
Query: 275  ctagaaggcggcggccctgtccttgacgacgacgtcctccacctcccgccgcatgagctt 334
            ||||||||| || |||||||||||||||||||||||||| ||||||| || |||||||||
Sbjct: 1254 ctagaaggcagctgccctgtccttgacgacgacgtcctcgacctccctcctcatgagctt 1195

                                                                 
Query: 335  ctcctcgtgctgcctccggcagaacaccacccatgcgttcacctccagcgcca 387
            |||||| |||||||||| |||||| || ||||| |||||||||||||||||||
Sbjct: 1194 ctcctcctgctgcctcctgcagaagacgacccaggcgttcacctccagcgcca 1142

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  145 bits (73), Expect = 1e-31
 Identities = 103/113 (91%)
 Strand = Plus / Plus

                                                                           
Query: 275     ctagaaggcggcggccctgtccttgacgacgacgtcctccacctcccgccgcatgagctt 334
               ||||||||| || |||||||||||||||||||||||||| ||||||| || |||||||||
Sbjct: 4870638 ctagaaggcagctgccctgtccttgacgacgacgtcctcgacctccctcctcatgagctt 4870697

                                                                    
Query: 335     ctcctcgtgctgcctccggcagaacaccacccatgcgttcacctccagcgcca 387
               |||||| |||||||||| |||||| || ||||| |||||||||||||||||||
Sbjct: 4870698 ctcctcctgctgcctcctgcagaagacgacccaggcgttcacctccagcgcca 4870750



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 298     tgacgacgacgtcctccacc 317
               ||||||||||||||||||||
Sbjct: 2456744 tgacgacgacgtcctccacc 2456725

>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16,
              complete sequence
          Length = 159092

 Score =  145 bits (73), Expect = 1e-31
 Identities = 103/113 (91%)
 Strand = Plus / Minus

                                                                          
Query: 275    ctagaaggcggcggccctgtccttgacgacgacgtcctccacctcccgccgcatgagctt 334
              ||||||||| || |||||||||||||||||||||||||| ||||||| || |||||||||
Sbjct: 124909 ctagaaggcagctgccctgtccttgacgacgacgtcctcgacctccctcctcatgagctt 124850

                                                                   
Query: 335    ctcctcgtgctgcctccggcagaacaccacccatgcgttcacctccagcgcca 387
              |||||| |||||||||| |||||| || ||||| |||||||||||||||||||
Sbjct: 124849 ctcctcctgctgcctcctgcagaagacgacccaggcgttcacctccagcgcca 124797

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  145 bits (73), Expect = 1e-31
 Identities = 103/113 (91%)
 Strand = Plus / Plus

                                                                           
Query: 275     ctagaaggcggcggccctgtccttgacgacgacgtcctccacctcccgccgcatgagctt 334
               ||||||||| || |||||||||||||||||||||||||| ||||||| || |||||||||
Sbjct: 4869853 ctagaaggcagctgccctgtccttgacgacgacgtcctcgacctccctcctcatgagctt 4869912

                                                                    
Query: 335     ctcctcgtgctgcctccggcagaacaccacccatgcgttcacctccagcgcca 387
               |||||| |||||||||| |||||| || ||||| |||||||||||||||||||
Sbjct: 4869913 ctcctcctgctgcctcctgcagaagacgacccaggcgttcacctccagcgcca 4869965



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 298     tgacgacgacgtcctccacc 317
               ||||||||||||||||||||
Sbjct: 2456854 tgacgacgacgtcctccacc 2456835

>emb|AL513303.11| Human DNA sequence from clone RP11-464C19 on chromosome 10 Contains
            the 5' end of the COPEB gene for core promoter element
            binding protein (GBF ZF9 Zf9 BCD1 CPBP KLF6), two novel
            genes and a CpG island, complete sequence
          Length = 187833

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 24   aggagaagaaaaacagtggag 44
            |||||||||||||||||||||
Sbjct: 5819 aggagaagaaaaacagtggag 5799

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 26       gagaagaaaaacagtggagta 46
                |||||||||||||||||||||
Sbjct: 20954186 gagaagaaaaacagtggagta 20954206

>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0470G10
          Length = 145419

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    gagaagaaaaacagtggagta 46
             |||||||||||||||||||||
Sbjct: 77658 gagaagaaaaacagtggagta 77678

>dbj|AP006417.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT05D12, TM0303,
             complete sequence
          Length = 123806

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 23    taggagaagaaaaacagtgga 43
             |||||||||||||||||||||
Sbjct: 68807 taggagaagaaaaacagtgga 68827

>ref|NM_118428.2| Arabidopsis thaliana unknown protein AT4G22990 mRNA, complete cds
          Length = 2429

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 14  atcaagaactaggagaagaa 33
           ||||||||||||||||||||
Sbjct: 230 atcaagaactaggagaagaa 249

>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04,
              complete sequence
          Length = 176678

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    gacgacgacgtcctccacct 318
              ||||||||||||||||||||
Sbjct: 145159 gacgacgacgtcctccacct 145140

>ref|XM_538481.2| PREDICTED: Canis familiaris similar to Tumor-associated calcium
           signal transducer 1 precursor (Major gastrointestinal
           tumor-associated protein GA733-2) (Epithelial cell
           surface antigen) (Epithelial glycoprotein) (EGP)
           (Adenocarcinoma-associated antigen) (KSA) (KS 1/4
           antigen)... (LOC481360), mRNA
          Length = 1771

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 339 tcgtgctgcctccggcagaa 358
           ||||||||||||||||||||
Sbjct: 333 tcgtgctgcctccggcagaa 352

>emb|AL161558.2|ATCHRIV58 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 58
          Length = 193550

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    atcaagaactaggagaagaa 33
             ||||||||||||||||||||
Sbjct: 93524 atcaagaactaggagaagaa 93505

>emb|AL031018.1|ATF7H19 Arabidopsis thaliana DNA chromosome 4, BAC clone F7H19 (ESSA project)
          Length = 139316

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    atcaagaactaggagaagaa 33
             ||||||||||||||||||||
Sbjct: 64437 atcaagaactaggagaagaa 64418

>gb|AF116463.2|AF116463 Streptomyces lincolnensis putative oxidoreductase gene, partial cds;
            putative secreted protein, putative DNA binding protein,
            hypothetical proteins, and putative regulatory protein
            WdlA (wdlA) genes, complete cds; and hypothetical protein
            gene, partial cds
          Length = 7152

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 300  acgacgacgtcctccacctc 319
            ||||||||||||||||||||
Sbjct: 5569 acgacgacgtcctccacctc 5588

>gb|AY056374.1| Arabidopsis thaliana AT4g22990/F7H19_170 mRNA, complete cds
          Length = 2428

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 14  atcaagaactaggagaagaa 33
           ||||||||||||||||||||
Sbjct: 229 atcaagaactaggagaagaa 248

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 298     tgacgacgacgtcctccacc 317
               ||||||||||||||||||||
Sbjct: 5410768 tgacgacgacgtcctccacc 5410787

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 23      taggagaagaaaaacagtggagta 46
               ||||||||| ||||||||||||||
Sbjct: 1227717 taggagaagtaaaacagtggagta 1227694

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 23      taggagaagaaaaacagtggagta 46
               ||||||||| ||||||||||||||
Sbjct: 5256815 taggagaagtaaaacagtggagta 5256792

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    gacgacgacgtcctccacct 318
              ||||||||||||||||||||
Sbjct: 627760 gacgacgacgtcctccacct 627741

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 309      tcctccacctcccgccgcat 328
                ||||||||||||||||||||
Sbjct: 35860670 tcctccacctcccgccgcat 35860651

>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09,
             complete sequence
          Length = 106057

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   tgacgacgacgtcctccacc 317
             ||||||||||||||||||||
Sbjct: 29240 tgacgacgacgtcctccacc 29221

>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 105645

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   tgacgacgacgtcctccacc 317
             ||||||||||||||||||||
Sbjct: 82785 tgacgacgacgtcctccacc 82804

>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome
          Length = 4202352

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 17      aagaactaggagaagaaaaa 36
               ||||||||||||||||||||
Sbjct: 1303150 aagaactaggagaagaaaaa 1303131

>dbj|AP003848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1715_A07
          Length = 130907

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 23     taggagaagaaaaacagtggagta 46
              ||||||||| ||||||||||||||
Sbjct: 123529 taggagaagtaaaacagtggagta 123506

>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1203H11
          Length = 156561

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 23     taggagaagaaaaacagtggagta 46
              ||||||||| ||||||||||||||
Sbjct: 140954 taggagaagtaaaacagtggagta 140931

>dbj|AP005730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0073J19
          Length = 165174

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 23    taggagaagaaaaacagtggagta 46
             ||||||||| ||||||||||||||
Sbjct: 57024 taggagaagtaaaacagtggagta 57001

>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0506B12
          Length = 170759

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    tcctccacctcccgccgcat 328
              ||||||||||||||||||||
Sbjct: 125128 tcctccacctcccgccgcat 125109

>dbj|AP004379.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0589E08
          Length = 138416

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 23    taggagaagaaaaacagtggagta 46
             ||||||||| ||||||||||||||
Sbjct: 55578 taggagaagtaaaacagtggagta 55555

>dbj|AP006617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0091F23
          Length = 147699

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 23    taggagaagaaaaacagtggagta 46
             ||||||||| ||||||||||||||
Sbjct: 94796 taggagaagtaaaacagtggagta 94773

>dbj|AK108933.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-A09, full
           insert sequence
          Length = 1520

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 299 gacgacgacgtcctccacct 318
           ||||||||||||||||||||
Sbjct: 526 gacgacgacgtcctccacct 545

>gb|AF170704.1|AF170704 Streptomyces spectabilis SpcC (spcC) gene, partial cds; SpcB (spcB),
            SpcA (spcA), SpcT (spcT), SpcN (spcN), and SpcZ (spcZ)
            genes, complete cds; and unknown gene, partial cds
          Length = 6682

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 240  cggcgccgatcatggcgcggcgcg 263
            |||||||||||||| |||||||||
Sbjct: 2986 cggcgccgatcatgacgcggcgcg 2963

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 298     tgacgacgacgtcctccacc 317
               ||||||||||||||||||||
Sbjct: 5410757 tgacgacgacgtcctccacc 5410776

>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 141841

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   tgacgacgacgtcctccacc 317
             ||||||||||||||||||||
Sbjct: 55040 tgacgacgacgtcctccacc 55021


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,815,442
Number of Sequences: 3902068
Number of extensions: 2815442
Number of successful extensions: 50150
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49767
Number of HSP's gapped (non-prelim): 383
length of query: 387
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 365
effective length of database: 17,147,199,772
effective search space: 6258727916780
effective search space used: 6258727916780
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)