>YIAH_ECOLI (P37669) Inner membrane protein yiaH|
          Length = 331

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
 Frame = +1

Query: 76  IHTPTFRQTNKHCLSPVTW----------RVTAPIQLLRGRVCILNVSSLSQKKALRAGV 225
           IHT T+  TN H +SPVTW          RV+ P+  +          S   +  LR G+
Sbjct: 22  IHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMISGYLFFGERSAQPRHFLRIGL 81

>EPIPL_MOUSE (Q8R0W0) Epiplakin|
          Length = 6548

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 108  ALPVPGNVARDRTHSITSWPCLHSQCIFALSKKSPACRC 224
            A+ VP N+ R + HS++ W  LHS+ + A  ++     C
Sbjct: 1460 AMKVPINMGRFQGHSVSLWDLLHSEYVGAEKRRELVALC 1498

>EREG_MOUSE (Q61521) Epiregulin precursor|
          Length = 162

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 168 CLHSQCIFALSKKSPACRCK 227
           CLH QCI+ +  +   CRC+
Sbjct: 69  CLHGQCIYLVDMREKFCRCE 88

>IAP1_NPVOP (O10296) Apoptosis inhibitor 1 (IAP-1)|
          Length = 275

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
 Frame = +3

Query: 54  AHTSPGRNSHAHLPTNQ*ALPVPGNVARDRTHSITSWPCLH----SQCIFALSKKSPACR 221
           A T+PG  + A   +      +   V  +R       PC H     QC FAL  K P CR
Sbjct: 208 AETAPGEPAPAFAGSEA----LECKVCLERQRDAVLLPCRHFCVCMQCYFALDGKCPTCR 263

>EREG_HUMAN (O14944) Epiregulin precursor|
          Length = 169

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 168 CLHSQCIFALSKKSPACRCK 227
           CLH QCI+ +      CRC+
Sbjct: 76  CLHGQCIYLVDMSQNYCRCE 95

>TEFF2_MOUSE (Q9QYM9) Transmembrane protein with EGF-like and two|
           follistatin-like domains 2 precursor (Tomoregulin) (TR)
          Length = 374

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 168 CLHSQCIFALSKKSPACRC 224
           C+H +C  +++ + P+CRC
Sbjct: 273 CMHGKCEHSINMQEPSCRC 291

>TEFF2_HUMAN (Q9UIK5) Transmembrane protein with EGF-like and two|
           follistatin-like domains 2 precursor (Transmembrane
           protein containing epidermal growth factor and
           follistatin domains) (Tomoregulin) (TR) (Hyperplastic
           polyposis protein 1)
          Length = 374

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 168 CLHSQCIFALSKKSPACRC 224
           C+H +C  +++ + P+CRC
Sbjct: 273 CMHGKCEHSINMQEPSCRC 291

>BTC_MOUSE (Q05928) Betacellulin precursor (BTC)|
          Length = 177

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +3

Query: 168 CLHSQCIFALSKKSPACRCK 227
           C+H +C F + +++P+C C+
Sbjct: 77  CIHGRCRFVVDEQTPSCICE 96

>RK33_PHYPA (Q6YXM3) Chloroplast 50S ribosomal protein L33|
          Length = 66

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 19  KN*EKKNSGVQRHTLAREGIHTPTFRQTNKHC 114
           +N EKK  GV R+T  +   +TPT  +  K C
Sbjct: 21  QNNEKKKLGVSRYTTQKNRRNTPTRLELKKFC 52

>CNTFR_RAT (Q08406) Ciliary neurotrophic factor receptor alpha precursor|
           (CNTFR alpha)
          Length = 372

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 15  DQELGEEKQWSTTAHTSPGRNSHAHLPT 98
           D E+G    WS  AH +P      HL T
Sbjct: 284 DNEIGTWSDWSVAAHATPWTEEPRHLTT 311

>CNTFR_MOUSE (O88507) Ciliary neurotrophic factor receptor alpha precursor|
           (CNTFR alpha)
          Length = 372

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 15  DQELGEEKQWSTTAHTSPGRNSHAHLPT 98
           D E+G    WS  AH +P      HL T
Sbjct: 284 DNEIGTWSDWSVAAHATPWTEEPRHLTT 311

>CNTFR_HUMAN (P26992) Ciliary neurotrophic factor receptor alpha precursor|
           (CNTFR alpha)
          Length = 372

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 15  DQELGEEKQWSTTAHTSPGRNSHAHLPT 98
           D E+G    WS  AH +P      HL T
Sbjct: 284 DNEIGTWSDWSVAAHATPWTEEPRHLTT 311

>TGFA_SHEEP (P98135) Transforming growth factor alpha precursor (TGF-alpha)|
           (EGF-like TGF) (ETGF) (TGF type 1) (Fragment)
          Length = 133

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 168 CLHSQCIFALSKKSPACRC 224
           C H  C F L ++ PAC C
Sbjct: 54  CFHGTCRFLLQEEKPACVC 72

>CNTFR_CANFA (Q71DR4) Ciliary neurotrophic factor receptor alpha precursor|
           (CNTFR alpha)
          Length = 372

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 15  DQELGEEKQWSTTAHTSPGRNSHAHLPT 98
           D E+G    WS  AH +P      HL T
Sbjct: 284 DYEIGTWSDWSVAAHATPWTEEPRHLTT 311


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,787,251
Number of Sequences: 219361
Number of extensions: 794541
Number of successful extensions: 1936
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1935
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)