ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet12b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF498269.1| Haynaldia villosa clone kong32 mRNA 400 e-108
2gb|AY103930.1| Zea mays PCO070877 mRNA sequence 254 2e-64
3ref|NM_191445.1| Oryza sativa (japonica cultivar-group), predic... 232 6e-58
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 232 6e-58
5dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic D... 232 6e-58
6dbj|AK119225.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 6e-58
7dbj|AK119161.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 6e-58
8dbj|AK060438.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 6e-58
9gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome... 226 4e-56
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 226 4e-56
11dbj|AK060476.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 1e-55
12gb|AY112348.1| Zea mays CL5838_2 mRNA sequence 210 2e-51
13dbj|AK066345.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 4e-25
14ref|XM_475670.1| Oryza sativa (japonica cultivar-group), predic... 115 9e-23
15gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.28
16ref|XM_782343.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.28
17dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
18gb|DQ230532.1| Streptomyces sp. Tu6071 phenalinolactone biosynth... 44 0.28
19gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.28
20ref|XM_511186.1| PREDICTED: Pan troglodytes megakaryoblastic leu... 42 1.1
21gb|AC012626.10| Homo sapiens chromosome 16 clone CTD-2118O12, co... 42 1.1
22gb|BC073950.1| Homo sapiens MKL/myocardin-like 2, mRNA (cDNA clo... 42 1.1
23emb|CR749797.1| Homo sapiens mRNA; cDNA DKFZp686J1745 (from clon... 42 1.1
24dbj|AK127530.1| Homo sapiens cDNA FLJ45623 fis, clone BRTHA30279... 42 1.1
25gb|AC040173.5| Homo sapiens chromosome 16 clone RP11-65J21, comp... 42 1.1
26gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 1.1
27dbj|AB033069.2| Homo sapiens mRNA for KIAA1243 protein, partial cds 42 1.1
28gb|AF040659.1| Caenorhabditis elegans cosmid ZK484, complete seq... 40 4.4
29gb|AC002463.1| Homo sapiens BAC clone CTA-302F4 from 7, complete... 40 4.4
30gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 4.4
31emb|AL137059.20| Human DNA sequence from clone RP11-125I23 on ch... 40 4.4
32gb|CP000088.1| Thermobifida fusca YX, complete genome 40 4.4
33gb|AC116608.1| Papio hamadryas chromosome , clone RP41-155I24, c... 40 4.4
34gb|AF272641.1|AF272641 Gorilla gorilla glucocerebrosidase (GBA) ... 40 4.4 
>gb|AF498269.1| Haynaldia villosa clone kong32 mRNA
          Length = 1219

 Score =  400 bits (202), Expect = e-108
 Identities = 211/214 (98%)
 Strand = Plus / Minus

                                                                        
Query: 117  gcttaaagcgagaggccgccggactcctcgtcctcgtcgaggccggaggtgtagacggtg 176
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 gcttagagcgagaggccgccggactcctcgtcctcgtcgaggccggaggtgtagacggtg 1030

                                                                        
Query: 177  taaagcgaccagatgaggccgaagacgcccaggaggatccaccccagcaggttgttgctc 236
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 tagagcgaccagatgaggccgaagacgcccaggaggatccaccccagcaggttgttgctc 970

                                                                        
Query: 237  agccccaggctgagcccggtgccctccgtcgacatccgctcgtagaccagagcgagcgcc 296
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 969  agccccaggctgagcccggtgccctccgtcgacatccgctcgtcgaccagagcgagcgcc 910

                                              
Query: 297  ggccccgcggacgcggtcaccgcgcccgccgcgg 330
            ||||||||||||||||||||||||||||||||||
Sbjct: 909  ggccccgcggacgcggtcaccgcgcccgccgcgg 876



 Score =  157 bits (79), Expect = 3e-35
 Identities = 88/91 (96%)
 Strand = Plus / Minus

                                                                        
Query: 4    agaatggaaacgcttagatacaaatatccatgtctggaattacattacaccgatcatggc 63
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1191 agaatggaaacgcttagatacaaatatccatctctggaattacattacaccgatcatggc 1132

                                           
Query: 64   gatgctcgtgagcggattacatgaggcgacg 94
            |||||||| |||||||||||||||| |||||
Sbjct: 1131 gatgctcgcgagcggattacatgagacgacg 1101
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>gb|AY103930.1| Zea mays PCO070877 mRNA sequence
          Length = 829

 Score =  254 bits (128), Expect = 2e-64
 Identities = 188/208 (90%)
 Strand = Plus / Minus

                                                                       
Query: 123 agcgagaggccgccggactcctcgtcctcgtcgaggccggaggtgtagacggtgtaaagc 182
           ||||||||||| |||||||||||||||||||||||| | |||||||||| |||||| || 
Sbjct: 533 agcgagaggccaccggactcctcgtcctcgtcgaggtcagaggtgtagatggtgtagagg 474

                                                                       
Query: 183 gaccagatgaggccgaagacgcccaggaggatccaccccagcaggttgttgctcagcccc 242
           |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| 
Sbjct: 473 gaccagatgaggccgaagacccccaggaggatccaccccagcaggttgttgctgagcccg 414

                                                                       
Query: 243 aggctgagcccggtgccctccgtcgacatccgctcgtagaccagagcgagcgccggcccc 302
           ||||| ||||||||||||||||| ||||| |||||||  || || || ||||| ||||||
Sbjct: 413 aggctcagcccggtgccctccgtggacatgcgctcgtccacgagcgccagcgcgggcccc 354

                                       
Query: 303 gcggacgcggtcaccgcgcccgccgcgg 330
           || |||||||||||||||||||| ||||
Sbjct: 353 gccgacgcggtcaccgcgcccgctgcgg 326
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>ref|NM_191445.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 480

 Score =  232 bits (117), Expect = 6e-58
 Identities = 147/157 (93%)
 Strand = Plus / Minus

                                                                       
Query: 123 agcgagaggccgccggactcctcgtcctcgtcgaggccggaggtgtagacggtgtaaagc 182
           ||||||||||||||||||||||||||||| |||||| |||||||||||| |||||| |||
Sbjct: 360 agcgagaggccgccggactcctcgtcctcctcgaggtcggaggtgtagatggtgtagagc 301

                                                                       
Query: 183 gaccagatgaggccgaagacgcccaggaggatccaccccagcaggttgttgctcagcccc 242
           ||||||||||||||||| || || || |||||||||||||||||||||||||||||||| 
Sbjct: 300 gaccagatgaggccgaacaccccgagcaggatccaccccagcaggttgttgctcagcccg 241

                                                
Query: 243 aggctgagcccggtgccctccgtcgacatccgctcgt 279
           ||||||||||||||||||||||||||||||| |||||
Sbjct: 240 aggctgagcccggtgccctccgtcgacatcctctcgt 204
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  232 bits (117), Expect = 6e-58
 Identities = 147/157 (93%)
 Strand = Plus / Plus

                                                                            
Query: 123      agcgagaggccgccggactcctcgtcctcgtcgaggccggaggtgtagacggtgtaaagc 182
                ||||||||||||||||||||||||||||| |||||| |||||||||||| |||||| |||
Sbjct: 32701991 agcgagaggccgccggactcctcgtcctcctcgaggtcggaggtgtagatggtgtagagc 32702050

                                                                            
Query: 183      gaccagatgaggccgaagacgcccaggaggatccaccccagcaggttgttgctcagcccc 242
                ||||||||||||||||| || || || |||||||||||||||||||||||||||||||| 
Sbjct: 32702051 gaccagatgaggccgaacaccccgagcaggatccaccccagcaggttgttgctcagcccg 32702110

                                                     
Query: 243      aggctgagcccggtgccctccgtcgacatccgctcgt 279
                ||||||||||||||||||||||||||||||| |||||
Sbjct: 32702111 aggctgagcccggtgccctccgtcgacatcctctcgt 32702147
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>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0490D09
          Length = 154430

 Score =  232 bits (117), Expect = 6e-58
 Identities = 147/157 (93%)
 Strand = Plus / Plus

                                                                         
Query: 123   agcgagaggccgccggactcctcgtcctcgtcgaggccggaggtgtagacggtgtaaagc 182
             ||||||||||||||||||||||||||||| |||||| |||||||||||| |||||| |||
Sbjct: 64786 agcgagaggccgccggactcctcgtcctcctcgaggtcggaggtgtagatggtgtagagc 64845

                                                                         
Query: 183   gaccagatgaggccgaagacgcccaggaggatccaccccagcaggttgttgctcagcccc 242
             ||||||||||||||||| || || || |||||||||||||||||||||||||||||||| 
Sbjct: 64846 gaccagatgaggccgaacaccccgagcaggatccaccccagcaggttgttgctcagcccg 64905

                                                  
Query: 243   aggctgagcccggtgccctccgtcgacatccgctcgt 279
             ||||||||||||||||||||||||||||||| |||||
Sbjct: 64906 aggctgagcccggtgccctccgtcgacatcctctcgt 64942
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>dbj|AK119225.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H08, full
            insert sequence
          Length = 1475

 Score =  232 bits (117), Expect = 6e-58
 Identities = 147/157 (93%)
 Strand = Plus / Minus

                                                                        
Query: 123  agcgagaggccgccggactcctcgtcctcgtcgaggccggaggtgtagacggtgtaaagc 182
            ||||||||||||||||||||||||||||| |||||| |||||||||||| |||||| |||
Sbjct: 1295 agcgagaggccgccggactcctcgtcctcctcgaggtcggaggtgtagatggtgtagagc 1236

                                                                        
Query: 183  gaccagatgaggccgaagacgcccaggaggatccaccccagcaggttgttgctcagcccc 242
            ||||||||||||||||| || || || |||||||||||||||||||||||||||||||| 
Sbjct: 1235 gaccagatgaggccgaacaccccgagcaggatccaccccagcaggttgttgctcagcccg 1176

                                                 
Query: 243  aggctgagcccggtgccctccgtcgacatccgctcgt 279
            ||||||||||||||||||||||||||||||| |||||
Sbjct: 1175 aggctgagcccggtgccctccgtcgacatcctctcgt 1139
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>dbj|AK119161.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D04, full
           insert sequence
          Length = 639

 Score =  232 bits (117), Expect = 6e-58
 Identities = 147/157 (93%)
 Strand = Plus / Minus

                                                                       
Query: 123 agcgagaggccgccggactcctcgtcctcgtcgaggccggaggtgtagacggtgtaaagc 182
           ||||||||||||||||||||||||||||| |||||| |||||||||||| |||||| |||
Sbjct: 438 agcgagaggccgccggactcctcgtcctcctcgaggtcggaggtgtagatggtgtagagc 379

                                                                       
Query: 183 gaccagatgaggccgaagacgcccaggaggatccaccccagcaggttgttgctcagcccc 242
           ||||||||||||||||| || || || |||||||||||||||||||||||||||||||| 
Sbjct: 378 gaccagatgaggccgaacaccccgagcaggatccaccccagcaggttgttgctcagcccg 319

                                                
Query: 243 aggctgagcccggtgccctccgtcgacatccgctcgt 279
           ||||||||||||||||||||||||||||||| |||||
Sbjct: 318 aggctgagcccggtgccctccgtcgacatcctctcgt 282
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>dbj|AK060438.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-D03, full
           insert sequence
          Length = 635

 Score =  232 bits (117), Expect = 6e-58
 Identities = 147/157 (93%)
 Strand = Plus / Minus

                                                                       
Query: 123 agcgagaggccgccggactcctcgtcctcgtcgaggccggaggtgtagacggtgtaaagc 182
           ||||||||||||||||||||||||||||| |||||| |||||||||||| |||||| |||
Sbjct: 442 agcgagaggccgccggactcctcgtcctcctcgaggtcggaggtgtagatggtgtagagc 383

                                                                       
Query: 183 gaccagatgaggccgaagacgcccaggaggatccaccccagcaggttgttgctcagcccc 242
           ||||||||||||||||| || || || |||||||||||||||||||||||||||||||| 
Sbjct: 382 gaccagatgaggccgaacaccccgagcaggatccaccccagcaggttgttgctcagcccg 323

                                                
Query: 243 aggctgagcccggtgccctccgtcgacatccgctcgt 279
           ||||||||||||||||||||||||||||||| |||||
Sbjct: 322 aggctgagcccggtgccctccgtcgacatcctctcgt 286
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>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0108E17, complete sequence
          Length = 139829

 Score =  226 bits (114), Expect = 4e-56
 Identities = 144/154 (93%)
 Strand = Plus / Minus

                                                                         
Query: 126   gagaggccgccggactcctcgtcctcgtcgaggccggaggtgtagacggtgtaaagcgac 185
             ||||||||||||||||| ||||| ||||||||   |||||||||||||||||| ||||||
Sbjct: 62824 gagaggccgccggactcgtcgtcgtcgtcgagcgtggaggtgtagacggtgtagagcgac 62765

                                                                         
Query: 186   cagatgaggccgaagacgcccaggaggatccaccccagcaggttgttgctcagccccagg 245
             |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 62764 cagatgaggccgaacacgccgaggaggatccaccccagcaggttgttgctcagccccagg 62705

                                               
Query: 246   ctgagcccggtgccctccgtcgacatccgctcgt 279
             || |||||||| ||||||||||||||||||||||
Sbjct: 62704 ctcagcccggtcccctccgtcgacatccgctcgt 62671
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  226 bits (114), Expect = 4e-56
 Identities = 144/154 (93%)
 Strand = Plus / Minus

                                                                            
Query: 126      gagaggccgccggactcctcgtcctcgtcgaggccggaggtgtagacggtgtaaagcgac 185
                ||||||||||||||||| ||||| ||||||||   |||||||||||||||||| ||||||
Sbjct: 24993971 gagaggccgccggactcgtcgtcgtcgtcgagcgtggaggtgtagacggtgtagagcgac 24993912

                                                                            
Query: 186      cagatgaggccgaagacgcccaggaggatccaccccagcaggttgttgctcagccccagg 245
                |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 24993911 cagatgaggccgaacacgccgaggaggatccaccccagcaggttgttgctcagccccagg 24993852

                                                  
Query: 246      ctgagcccggtgccctccgtcgacatccgctcgt 279
                || |||||||| ||||||||||||||||||||||
Sbjct: 24993851 ctcagcccggtcccctccgtcgacatccgctcgt 24993818
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>dbj|AK060476.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-F04, full
           insert sequence
          Length = 522

 Score =  224 bits (113), Expect = 1e-55
 Identities = 146/157 (92%)
 Strand = Plus / Minus

                                                                       
Query: 123 agcgagaggccgccggactcctcgtcctcgtcgaggccggaggtgtagacggtgtaaagc 182
           |||| |||||||||||||||||||||||| |||||| |||||||||||| |||||| |||
Sbjct: 442 agcgggaggccgccggactcctcgtcctcctcgaggtcggaggtgtagatggtgtagagc 383

                                                                       
Query: 183 gaccagatgaggccgaagacgcccaggaggatccaccccagcaggttgttgctcagcccc 242
           ||||||||||||||||| || || || |||||||||||||||||||||||||||||||| 
Sbjct: 382 gaccagatgaggccgaacaccccgagcaggatccaccccagcaggttgttgctcagcccg 323

                                                
Query: 243 aggctgagcccggtgccctccgtcgacatccgctcgt 279
           ||||||||||||||||||||||||||||||| |||||
Sbjct: 322 aggctgagcccggtgccctccgtcgacatcctctcgt 286
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>gb|AY112348.1| Zea mays CL5838_2 mRNA sequence
          Length = 670

 Score =  210 bits (106), Expect = 2e-51
 Identities = 136/146 (93%)
 Strand = Plus / Minus

                                                                       
Query: 134 gccggactcctcgtcctcgtcgaggccggaggtgtagacggtgtaaagcgaccagatgag 193
           |||||| || ||||||| ||||||   |||||||||||||||||| || |||||||||||
Sbjct: 479 gccggagtcgtcgtccttgtcgagcgtggaggtgtagacggtgtagagggaccagatgag 420

                                                                       
Query: 194 gccgaagacgcccaggaggatccaccccagcaggttgttgctcagccccaggctgagccc 253
           ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 419 gccgaagacgcccagcaggatccaccccagcaggttgttgctgagccccaggctgagccc 360

                                     
Query: 254 ggtgccctccgtcgacatccgctcgt 279
           ||||||||||||||||||||||||||
Sbjct: 359 ggtgccctccgtcgacatccgctcgt 334
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>dbj|AK066345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064H24, full
           insert sequence
          Length = 741

 Score =  123 bits (62), Expect = 4e-25
 Identities = 86/94 (91%)
 Strand = Plus / Minus

                                                                       
Query: 126 gagaggccgccggactcctcgtcctcgtcgaggccggaggtgtagacggtgtaaagcgac 185
           ||||||||||||||||| ||||| ||||||||   |||||||||||||||||| ||||||
Sbjct: 399 gagaggccgccggactcgtcgtcgtcgtcgagcgtggaggtgtagacggtgtagagcgac 340

                                             
Query: 186 cagatgaggccgaagacgcccaggaggatccacc 219
           |||||||||||||| ||||| |||||||||||||
Sbjct: 339 cagatgaggccgaacacgccgaggaggatccacc 306
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>ref|XM_475670.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 375

 Score =  115 bits (58), Expect = 9e-23
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                       
Query: 126 gagaggccgccggactcctcgtcctcgtcgaggccggaggtgtagacggtgtaaagcgac 185
           ||||||||||||||||| ||||| ||||||||   |||||||||||||||||| ||||||
Sbjct: 315 gagaggccgccggactcgtcgtcgtcgtcgagcgtggaggtgtagacggtgtagagcgac 256

                                             
Query: 186 cagatgaggccgaagacgcccaggaggatccacc 219
           |||||||||||||| ||||| |||||| ||||||
Sbjct: 255 cagatgaggccgaacacgccgaggagggtccacc 222
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>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032K12,
              complete sequence
          Length = 166936

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 302    cgcggacgcggtcaccgcgccc 323
              ||||||||||||||||||||||
Sbjct: 152144 cgcggacgcggtcaccgcgccc 152123
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>ref|XM_782343.1| PREDICTED: Strongylocentrotus purpuratus similar to Arylsulfatase A
           precursor (ASA) (Cerebroside-sulfatase) (LOC582391),
           mRNA
          Length = 2482

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 192 aggccgaagacgcccaggagga 213
           ||||||||||||||||||||||
Sbjct: 47  aggccgaagacgcccaggagga 26
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 302     cgcggacgcggtcaccgcgccc 323
               ||||||||||||||||||||||
Sbjct: 7026886 cgcggacgcggtcaccgcgccc 7026865
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>gb|DQ230532.1| Streptomyces sp. Tu6071 phenalinolactone biosynthetic gene cluster,
             complete sequence
          Length = 49461

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 307   acgcggtcaccgcgcccgccgc 328
             ||||||||||||||||||||||
Sbjct: 26954 acgcggtcaccgcgcccgccgc 26975
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 302     cgcggacgcggtcaccgcgccc 323
               ||||||||||||||||||||||
Sbjct: 7093353 cgcggacgcggtcaccgcgccc 7093332
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>ref|XM_511186.1| PREDICTED: Pan troglodytes megakaryoblastic leukemia 2 protein
            (LOC454334), mRNA
          Length = 3346

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 227  gttgttgctcagccccaggct 247
            |||||||||||||||||||||
Sbjct: 2053 gttgttgctcagccccaggct 2073
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>gb|AC012626.10| Homo sapiens chromosome 16 clone CTD-2118O12, complete sequence
          Length = 149370

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 227   gttgttgctcagccccaggct 247
             |||||||||||||||||||||
Sbjct: 91737 gttgttgctcagccccaggct 91717
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>gb|BC073950.1| Homo sapiens MKL/myocardin-like 2, mRNA (cDNA clone IMAGE:5521559),
           containing frame-shift errors
          Length = 2561

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 227 gttgttgctcagccccaggct 247
           |||||||||||||||||||||
Sbjct: 495 gttgttgctcagccccaggct 515
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>emb|CR749797.1| Homo sapiens mRNA; cDNA DKFZp686J1745 (from clone DKFZp686J1745)
          Length = 7372

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 227 gttgttgctcagccccaggct 247
           |||||||||||||||||||||
Sbjct: 854 gttgttgctcagccccaggct 874
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>dbj|AK127530.1| Homo sapiens cDNA FLJ45623 fis, clone BRTHA3027957, weakly  similar
           to Homo sapiens megakaryoblastic leukemia
           (translocation) 1 (MKL1)
          Length = 3292

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 227 gttgttgctcagccccaggct 247
           |||||||||||||||||||||
Sbjct: 584 gttgttgctcagccccaggct 604
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>gb|AC040173.5| Homo sapiens chromosome 16 clone RP11-65J21, complete sequence
          Length = 192971

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 227    gttgttgctcagccccaggct 247
              |||||||||||||||||||||
Sbjct: 179756 gttgttgctcagccccaggct 179736
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 307    acgcggtcaccgcgcccgccg 327
              |||||||||||||||||||||
Sbjct: 912931 acgcggtcaccgcgcccgccg 912911
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>dbj|AB033069.2| Homo sapiens mRNA for KIAA1243 protein, partial cds
          Length = 7815

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 227  gttgttgctcagccccaggct 247
            |||||||||||||||||||||
Sbjct: 1315 gttgttgctcagccccaggct 1335
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>gb|AF040659.1| Caenorhabditis elegans cosmid ZK484, complete sequence
          Length = 32750

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    tccatgtctggaattacatt 49
             ||||||||||||||||||||
Sbjct: 10116 tccatgtctggaattacatt 10135
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>gb|AC002463.1| Homo sapiens BAC clone CTA-302F4 from 7, complete sequence
          Length = 135684

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 25    aaatatccatgtctggaattacattaca 52
             |||||||||||| ||||||| |||||||
Sbjct: 83412 aaatatccatgtttggaatttcattaca 83439
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 148     cctcgtcgaggccggaggtg 167
               ||||||||||||||||||||
Sbjct: 2257836 cctcgtcgaggccggaggtg 2257855
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>emb|AL137059.20| Human DNA sequence from clone RP11-125I23 on chromosome 13 Contains the
              MTIF3 gene for mitochondrial translational initiation
              factor 3, the GTF3A gene for general transcription factor
              IIIA (AP2, TFIIIA) and two CpG islands, complete sequence
          Length = 166141

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     gtctggaattacattacacc 54
              ||||||||||||||||||||
Sbjct: 134971 gtctggaattacattacacc 134990
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 311     ggtcaccgcgcccgccgcgg 330
               ||||||||||||||||||||
Sbjct: 1480985 ggtcaccgcgcccgccgcgg 1480966
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>gb|AC116608.1| Papio hamadryas chromosome , clone RP41-155I24, complete sequence
          Length = 161654

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   cccggtgccctccgtcgaca 270
             ||||||||||||||||||||
Sbjct: 20167 cccggtgccctccgtcgaca 20148
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>gb|AF272641.1|AF272641 Gorilla gorilla glucocerebrosidase (GBA) pseudogene, complete
            sequence
          Length = 5498

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 240  cccaggctgagcccggtgcc 259
            ||||||||||||||||||||
Sbjct: 4971 cccaggctgagcccggtgcc 4952


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,076,706
Number of Sequences: 3902068
Number of extensions: 2076706
Number of successful extensions: 46427
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46116
Number of HSP's gapped (non-prelim): 311
length of query: 330
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 308
effective length of database: 17,147,199,772
effective search space: 5281337529776
effective search space used: 5281337529776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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