>gb|AY112540.1| Zea mays CL33472_1 mRNA sequence
          Length = 452

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 260 tctactggcagctcgctaatcgcgatcgctgacccaaga 298
           |||||||||||||||| ||||||||||||||||| ||||
Sbjct: 383 tctactggcagctcgcgaatcgcgatcgctgaccgaaga 421

>gb|AY107894.1| Zea mays PCO107975 mRNA sequence
          Length = 988

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 260 tctactggcagctcgctaatcgcgatcgctgacccaaga 298
           ||||||||||||| || |||||||| |||||||| ||||
Sbjct: 534 tctactggcagcttgcgaatcgcgaccgctgaccgaaga 496

>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete
              sequence
          Length = 145507

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 260    tctactggcagctcgctaatcgcgatcgctgacc 293
              ||||||||||||| || |||||| ||||||||||
Sbjct: 105586 tctactggcagcttgcgaatcgcaatcgctgacc 105619

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 260      tctactggcagctcgctaatcgcgatcgctgacc 293
                ||||||||||||| || |||||| ||||||||||
Sbjct: 32453458 tctactggcagcttgcgaatcgcaatcgctgacc 32453491

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 260      tctactggcagctcgctaatcgcgatcgctgacc 293
                ||||||||||||| || |||||| ||||||||||
Sbjct: 32543968 tctactggcagcttgcgaatcgcaatcgctgacc 32544001

>emb|AL954143.9| Zebrafish DNA sequence from clone CH211-206A7 in linkage group 19,
             complete sequence
          Length = 168515

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 228   atgagatcaaatcttcctccat 249
             ||||||||||||||||||||||
Sbjct: 91569 atgagatcaaatcttcctccat 91590

>dbj|AK106114.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E02, full
            insert sequence
          Length = 1722

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 260  tctactggcagctcgctaatcgcgatcgctgacc 293
            ||||||||||||| || |||||| ||||||||||
Sbjct: 1557 tctactggcagcttgcgaatcgcaatcgctgacc 1524

>dbj|AK069046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009K09, full
            insert sequence
          Length = 1903

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 260  tctactggcagctcgctaatcgcgatcgctgacc 293
            ||||||||||||| || |||||| ||||||||||
Sbjct: 1558 tctactggcagcttgcgaatcgcaatcgctgacc 1525

>gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, complete sequence
          Length = 198281

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 92     tccacagtagtataatagtaa 112
              |||||||||||||||||||||
Sbjct: 151331 tccacagtagtataatagtaa 151351

>gb|AC096749.2| Homo sapiens BAC clone RP11-415L23 from 4, complete sequence
          Length = 112187

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 236   aaatcttcctccatccttcct 256
             |||||||||||||||||||||
Sbjct: 79059 aaatcttcctccatccttcct 79039

>gb|AC159028.3| Pan troglodytes BAC clone CH251-413M12 from chromosome unknown,
            complete sequence
          Length = 172935

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 236  aaatcttcctccatccttcct 256
            |||||||||||||||||||||
Sbjct: 1746 aaatcttcctccatccttcct 1726

>gb|AC161820.5| Pan troglodytes BAC clone CH251-502M7 from chromosome unknown, complete
             sequence
          Length = 169869

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 236   aaatcttcctccatccttcct 256
             |||||||||||||||||||||
Sbjct: 21705 aaatcttcctccatccttcct 21725

>gb|AC120348.9| Mus musculus chromosome 5, clone RP23-55P22, complete sequence
          Length = 244565

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    aaatcttcctccatccttcc 255
              ||||||||||||||||||||
Sbjct: 128670 aaatcttcctccatccttcc 128689

>gb|AC115746.10| Mus musculus chromosome 15, clone RP23-3J8, complete sequence
          Length = 214765

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    caatcatgagatcaaatctt 242
              ||||||||||||||||||||
Sbjct: 207321 caatcatgagatcaaatctt 207340

>gb|AC124987.9| Mus musculus chromosome 3, clone RP24-364E17, complete sequence
          Length = 165330

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   tcaaatcttcctccatcctt 253
             ||||||||||||||||||||
Sbjct: 73963 tcaaatcttcctccatcctt 73982

>gb|AC110379.3| Mus musculus BAC clone RP24-193N24 from 15, complete sequence
          Length = 139884

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    caatcatgagatcaaatctt 242
              ||||||||||||||||||||
Sbjct: 119170 caatcatgagatcaaatctt 119189

>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence
          Length = 264425

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    aaatcttcctccatccttcc 255
              ||||||||||||||||||||
Sbjct: 224212 aaatcttcctccatccttcc 224193

>emb|AL513317.11| Human DNA sequence from clone RP11-393P6 on chromosome 9, complete
             sequence
          Length = 142368

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    tataaacaatttctacttct 44
             ||||||||||||||||||||
Sbjct: 46018 tataaacaatttctacttct 46037

>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 58      caacaaccaccagttttaca 77
               ||||||||||||||||||||
Sbjct: 4013273 caacaaccaccagttttaca 4013292

>dbj|AP008932.1| Rhodococcus erythropolis PR4 plasmid pREC1, complete sequence
          Length = 104014

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   agcacagccccgccgtcacc 194
             ||||||||||||||||||||
Sbjct: 33452 agcacagccccgccgtcacc 33433

>gb|AC097512.2| Homo sapiens BAC clone RP11-412P11 from 4, complete sequence
          Length = 149282

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    acagcaaacaatatcatgga 151
              ||||||||||||||||||||
Sbjct: 116546 acagcaaacaatatcatgga 116565

>gb|AC108051.3| Homo sapiens BAC clone RP11-332D2 from 2, complete sequence
          Length = 119875

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   tcttcctccatccttcctta 258
             ||||||||||||||||||||
Sbjct: 70331 tcttcctccatccttcctta 70350

>gb|AC154846.2| Mus musculus BAC clone RP23-45E1 from 14, complete sequence
          Length = 250542

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    caaatcttcctccatccttc 254
              ||||||||||||||||||||
Sbjct: 101590 caaatcttcctccatccttc 101609

>emb|CT033797.5| Mouse DNA sequence from clone RP23-451J17 on chromosome 17, complete
              sequence
          Length = 177126

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     gagtataaacaatttctact 41
              ||||||||||||||||||||
Sbjct: 106862 gagtataaacaatttctact 106881

>gb|AC132420.5| Mus musculus BAC clone RP23-292P14 from 3, complete sequence
          Length = 155821

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   ttcctccatccttccttatt 260
             ||||||||||||||||||||
Sbjct: 97267 ttcctccatccttccttatt 97286

>gb|AC120163.10| Mus musculus chromosome 15, clone RP24-466O11, complete sequence
          Length = 129237

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   caatcatgagatcaaatctt 242
             ||||||||||||||||||||
Sbjct: 70112 caatcatgagatcaaatctt 70093


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,636,469
Number of Sequences: 3902068
Number of extensions: 2636469
Number of successful extensions: 81375
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81283
Number of HSP's gapped (non-prelim): 92
length of query: 300
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 278
effective length of database: 17,147,199,772
effective search space: 4766921536616
effective search space used: 4766921536616
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)