| Clone Name | rbaet125g04 |
|---|---|
| Clone Library Name | barley_pub |
>GI1L1_ARATH (Q9MAA7) Probable gibberellin receptor GID1L1 (EC 3.-.-.-)| (GID1-like protein 1) Length = 345 Score = 32.0 bits (71), Expect = 0.40 Identities = 18/44 (40%), Positives = 26/44 (59%) Frame = -3 Query: 315 ALVVAPLGDVLRDRVLGYAARLKDMGKDVELVEFEGQQHGFSIL 184 +LVV D++RD L YA LK G++V+L+ E GF +L Sbjct: 281 SLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYLL 324
>LIPS_RAT (P15304) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)| Length = 1068 Score = 30.8 bits (68), Expect = 0.89 Identities = 18/40 (45%), Positives = 23/40 (57%) Frame = -3 Query: 312 LVVAPLGDVLRDRVLGYAARLKDMGKDVELVEFEGQQHGF 193 LV L +L D V+ +A RLKD+G+ V L E HGF Sbjct: 997 LVACALDPMLDDSVM-FARRLKDLGQPVTLKVVEDLPHGF 1035
>LIP2_MORS1 (P24484) Lipase 2 (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 433 Score = 30.4 bits (67), Expect = 1.2 Identities = 18/40 (45%), Positives = 22/40 (55%) Frame = -3 Query: 312 LVVAPLGDVLRDRVLGYAARLKDMGKDVELVEFEGQQHGF 193 +VVA L D+LRD L YA L+ G V+ G HGF Sbjct: 355 IVVAEL-DILRDEGLAYAELLQKEGVQVQTYTVLGAPHGF 393
>PHLB2_MOUSE (Q8K1N2) Pleckstrin homology-like domain family B member 2 (Protein| LL5-beta) Length = 1249 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = -3 Query: 264 YAARLKDMGKDVELVEFEGQQHGFSILQPFGEAADELMGVLRR 136 Y K +DV++ F H S L P G +DEL+G L R Sbjct: 503 YRCHRKGSLQDVDVAGFGNLGHSASFLAPRGSRSDELLGDLTR 545
>BRN3_CHICK (Q91998) Brain-specific homeobox/POU domain protein 3 (Brn-3)| Length = 341 Score = 30.0 bits (66), Expect = 1.5 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Frame = +1 Query: 4 RKTHPSEMEWIYFYTRHTVPAGKKNPTSGDHHSFTTSSLSGVHEPPEHSHQ----LVGRL 171 +KTHP + + Y HT+ + PTS H S L+ H P H HQ L G L Sbjct: 68 QKTHPFKPDATY----HTMSSVSCTPTSSSVHLHHPSVLT-THHPHHHHHQPAQGLEGEL 122 Query: 172 AERL 183 + L Sbjct: 123 LDHL 126
>LIPS_MOUSE (P54310) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)| Length = 759 Score = 29.6 bits (65), Expect = 2.0 Identities = 17/40 (42%), Positives = 23/40 (57%) Frame = -3 Query: 312 LVVAPLGDVLRDRVLGYAARLKDMGKDVELVEFEGQQHGF 193 LV L +L D V+ +A RL+D+G+ V L E HGF Sbjct: 688 LVACALDPMLDDSVM-FARRLRDLGQPVTLKVVEDLPHGF 726
>COX10_MOUSE (Q8CFY5) Protoheme IX farnesyltransferase, mitochondrial precursor| (EC 2.5.1.-) (Heme O synthase) Length = 443 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +3 Query: 42 LHQTYSSRRKKKPNIRRSPFIHHIIAQRGTRTA*ALPSTRRPPR 173 LH+ S R K KP SPF+ H + + LPS P R Sbjct: 64 LHRGLSQRVKPKPEPPASPFLEHTSSGQARADEDELPSFPAPSR 107
>ALBU_MACMU (Q28522) Serum albumin precursor (Fragment)| Length = 600 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/56 (28%), Positives = 27/56 (48%) Frame = +1 Query: 58 VPAGKKNPTSGDHHSFTTSSLSGVHEPPEHSHQLVGRLAERLKDREAMLLSLELDK 225 +P K+ P + D+ S + L +HE S ++ E L +R +LELD+ Sbjct: 456 LPEAKRMPCAEDYLSVVLNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSALELDE 511
>PHZD_PSEFL (Q51790) Probable isochorismatase (EC 3.3.2.1) (2,3 dihydro-2,3| dihydroxybenzoate synthase) Length = 207 Score = 28.1 bits (61), Expect = 5.8 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -3 Query: 300 PLGDVLRDRVLGYAARLKDMGKD 232 PL D LRD+V+G AAR++ D Sbjct: 46 PLPDALRDQVVGNAARIRQWAAD 68
>HEMH_BACHD (Q9KDK9) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 310 Score = 27.7 bits (60), Expect = 7.6 Identities = 15/52 (28%), Positives = 26/52 (50%) Frame = -3 Query: 306 VAPLGDVLRDRVLGYAARLKDMGKDVELVEFEGQQHGFSILQPFGEAADELM 151 V+PL + D+ + +L ++ D+E + G +H + PF E A E M Sbjct: 53 VSPLAKITDDQAIALEQKLNELYDDIEFKSYLGLKH----IDPFIEDAVEQM 100
>CYNS_CHRVO (Q7NWU9) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)| (Cyanate hydrolase) Length = 155 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = +1 Query: 76 NPTSGDHHSFTTSSLSGVHEPPEHSHQLVGRLAERLKDREAMLLSLEL 219 N +G ++TT++L G H PE + +LV E +D A+L ++ L Sbjct: 32 NQGTGLSLAYTTAALLGQHALPEAAARLVAERLELDEDAIALLQAIPL 79
>BAI3_HUMAN (O60242) Brain-specific angiogenesis inhibitor 3 precursor| Length = 1522 Score = 27.3 bits (59), Expect = 9.9 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -1 Query: 305 WRRWATCSVTACWGTRRGSRT 243 W +W+TCSVT G++ +RT Sbjct: 297 WSQWSTCSVTCGQGSQVRTRT 317
>TSP2_MOUSE (Q03350) Thrombospondin-2 precursor| Length = 1172 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -1 Query: 317 RRSSWRRWATCSVTACWGTRRGSR 246 R S W W+ C+VT G R SR Sbjct: 496 RWSPWSPWSACTVTCAGGIRERSR 519
>CAUP_DROME (P54269) Homeobox protein caupolican| Length = 693 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 10/57 (17%) Frame = +2 Query: 41 STPDIQFPQEKKTQHQEITI----------HSPHHRSAGYTNRLSTPINSSAASPNG 181 S+ D Q P + QHQ+ + H PHH ++ L +P++ ++ G Sbjct: 489 SSADQQLPHQPLQQHQQQQLQQLQQQQQHHHHPHHHHPHHSMELGSPLSMMSSYAGG 545
>PHAR1_CHICK (Q801X6) Phosphatase and actin regulator 1| Length = 501 Score = 27.3 bits (59), Expect = 9.9 Identities = 20/71 (28%), Positives = 28/71 (39%) Frame = +1 Query: 58 VPAGKKNPTSGDHHSFTTSSLSGVHEPPEHSHQLVGRLAERLKDREAMLLSLELDKLDVF 237 +P K GDH LS + +PP + + R+A L D A + KL Sbjct: 109 LPPKKSAAFPGDHEDTPVKQLSLLKQPPALPPKPIARIASHLTDPGAPV------KLPCM 162 Query: 238 PHVLEPRRVPQ 270 P L P P+ Sbjct: 163 PVKLSPPLPPK 173 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.132 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,641,000 Number of Sequences: 219361 Number of extensions: 904440 Number of successful extensions: 3411 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 3242 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3411 length of database: 80,573,946 effective HSP length: 81 effective length of database: 62,805,705 effective search space used: 1507336920 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)