ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet124h09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CON8_NEUCR (P10169) Conidiation-specific protein 8 30 1.3
2STCB_EMENI (Q12608) Probable sterigmatocystin biosynthesis P450 ... 29 2.8
3SOX_ARATH (Q9SJA7) Probable sarcosine oxidase (EC 1.5.3.1) 29 3.7
4SEPA_EMENI (P78621) Cytokinesis protein sepA (FH1/2 protein) (Fo... 29 3.7

>CON8_NEUCR (P10169) Conidiation-specific protein 8|
          Length = 176

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 18/42 (42%), Positives = 20/42 (47%)
 Frame = -2

Query: 231 RRRRPAWSSSTTGSDGSRAIRWGTPRVTDVGNGRRSRHLHRG 106
           R  R A +SSTT   GS         VT+V  GRR  H H G
Sbjct: 85  RSERSASTSSTTSETGSDRPMGSASTVTEVPYGRRPSHGHGG 126



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>STCB_EMENI (Q12608) Probable sterigmatocystin biosynthesis P450 monooxygenase|
           STCB (EC 1.14.-.-) (Cytochrome P450 62)
          Length = 435

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -1

Query: 118 PSPWLC-LTPAIANWSVFANNLLH 50
           P PW   LT    +WSVFANN +H
Sbjct: 31  PGPWYASLTGLRLSWSVFANNRIH 54



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>SOX_ARATH (Q9SJA7) Probable sarcosine oxidase (EC 1.5.3.1)|
          Length = 416

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 229 AAEAGLELEHYRIGRFEGNPMGNATSH 149
           A   G+E++ + + RFE NP GNA  +
Sbjct: 378 AGGGGVEMKQFSLRRFEDNPKGNAKEY 404



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>SEPA_EMENI (P78621) Cytokinesis protein sepA (FH1/2 protein) (Forced|
           expression inhibition of growth A)
          Length = 1790

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -2

Query: 216 AWSSSTTGSDGSRAIRWGTPRVTDVGNGRRSRH 118
           A SSS TG  G+R  +WG P  +  GN   S H
Sbjct: 158 AMSSSATGDKGARYQQWGRPG-SSAGNAGLSHH 189


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.128    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,203,985
Number of Sequences: 219361
Number of extensions: 745892
Number of successful extensions: 1825
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1825
length of database: 80,573,946
effective HSP length: 55
effective length of database: 68,509,091
effective search space used: 1644218184
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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