ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet124h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1 182 2e-43
2gb|AC018509.6| Homo sapiens chromosome 10 clone RP11-307B23, com... 44 0.13
3gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete se... 42 0.51
4gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, comple... 42 0.51
5gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.51
6gb|AC137522.11| Medicago truncatula clone mth2-9h8, complete seq... 42 0.51
7gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete se... 42 0.51
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.51
9emb|AL110479.1|CEY105C5B Caenorhabditis elegans YAC Y105C5B, com... 42 0.51
10gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome... 42 0.51
11gb|AC122011.3| Mus musculus chromosome 10 clone RP24-352E6, comp... 40 2.0
12ref|XM_628995.1| Dictyostelium discoideum hypothetical protein (... 40 2.0
13gb|AC132580.2| Mus musculus BAC clone RP24-388H18 from chromosom... 40 2.0
14gb|AC100120.9| Mus musculus chromosome 10, clone RP23-40I1, comp... 40 2.0
15gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, com... 40 2.0
16gb|AC166078.2| Mus musculus BAC clone RP23-13G1 from chromosome ... 40 2.0
17emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 40 2.0
18gb|AC158753.8| Mus musculus chromosome 5, clone RP23-301E24, com... 40 2.0
19emb|BX664732.7| Mouse DNA sequence from clone RP23-452F17 on chr... 40 2.0
20dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 40 2.0
21emb|BX682540.5| Mouse DNA sequence from clone RP23-383O14 on chr... 40 2.0
22emb|AL671630.10| Mouse DNA sequence from clone RP23-327E13 on ch... 40 2.0
23gb|AC151473.3| Mus musculus BAC clone RP24-492O15 from chromosom... 38 7.9
24gb|AC115719.10| Mus musculus chromosome 18, clone RP24-356J16, c... 38 7.9
25gb|AY934044.1| Uncultured alpha proteobacterium clone I3K-121ITS... 38 7.9
26gb|AY933999.1| Uncultured alpha proteobacterium clone I3K-236ITS... 38 7.9
27gb|AY933919.1| Uncultured alpha proteobacterium clone I3K-014ITS... 38 7.9
28gb|AY933918.1| Uncultured alpha proteobacterium clone I3K-014ITS... 38 7.9
29gb|AY933917.1| Uncultured alpha proteobacterium clone I3K-014ITS... 38 7.9
30ref|XM_590013.2| PREDICTED: Bos taurus similar to Syntaxin-bindi... 38 7.9
31gb|AC146144.2| Pan troglodytes BAC clone RP43-37J17 from 7, comp... 38 7.9
32gb|AC122903.4| Mus musculus BAC clone RP23-44N5 from chromosome ... 38 7.9
33gb|BC010049.2| Homo sapiens non-POU domain containing, octamer-b... 38 7.9
34gb|AC146041.2| Pan troglodytes BAC clone RP43-98A7 from 7, compl... 38 7.9
35gb|AC119745.2| Homo sapiens 3 BAC RP11-629I15 (Roswell Park Canc... 38 7.9
36gb|AE014302.1| Homo sapiens chromosome 13q34 schizophrenia regio... 38 7.9
37gb|AC146378.2| Pan troglodytes BAC clone RP43-93I8 from 7, compl... 38 7.9
38ref|XM_724036.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 38 7.9
39gb|AC007384.3| Homo sapiens BAC clone RP11-325F22 from 7, comple... 38 7.9
40gb|AC092099.4| Homo sapiens BAC clone RP11-616A20 from 7, comple... 38 7.9
41ref|XM_675135.1| Plasmodium berghei strain ANKA hypothetical pro... 38 7.9
42gb|AC127168.17| Medicago truncatula clone mth2-15m13, complete s... 38 7.9
43emb|CR376789.4| Zebrafish DNA sequence from clone DKEYP-87A2 in ... 38 7.9
44emb|BX470201.4| Human DNA sequence from clone RP11-32H11 on chro... 38 7.9
45emb|AL590365.14| Human DNA sequence from clone RP11-455B2 on chr... 38 7.9
46emb|AL590225.4| Human DNA sequence from clone RP11-358H7 on chro... 38 7.9
47emb|AL139800.10| Human DNA sequence from clone RP11-219L22 on ch... 38 7.9
48emb|AL021332.1|HS398A12 Human DNA sequence from clone RP3-398A12... 38 7.9
49emb|BX005353.8| Zebrafish DNA sequence from clone DKEY-28D10, co... 38 7.9
50gb|AC154097.13| Mus musculus chromosome 18, clone RP23-337F6, co... 38 7.9
51gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 38 7.9
52gb|AC012082.6| Homo sapiens chr3 BAC RP11-420O16 (Roswell Park C... 38 7.9
53gb|AC092421.2| Homo sapiens chromosome 3 clone RP11-476A24, comp... 38 7.9
54gb|AC008871.5| Homo sapiens chromosome 5 clone CTD-2197I11, comp... 38 7.9
55ref|NM_171545.4| Caenorhabditis elegans OSMotic avoidance abnorm... 38 7.9
56ref|NM_063154.2| Caenorhabditis elegans K02A2.3 (K02A2.3) mRNA, ... 38 7.9
57gb|AC084520.1|CBRG18K16 Caenorhabditis briggsae cosmid G18K16, c... 38 7.9
58gb|AC007764.2|AC007764 Genomic sequence for Arabidopsis thaliana... 38 7.9
59gb|AC149893.2| Xenopus tropicalis clone ISB-263C13, complete seq... 38 7.9
60gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete... 38 7.9
61emb|BX005357.10| Zebrafish DNA sequence from clone CH211-120C8, ... 38 7.9
62gb|AC002430.1|AC002430 Human BAC clone CTB-66D11 from 7q22, comp... 38 7.9
63gb|AC009294.8|AC009294 Homo sapiens chromosome 11, clone 579_H_1... 38 7.9
64emb|AL929504.9| Zebrafish DNA sequence from clone CH211-155A11 i... 38 7.9
65emb|Z75956.1|CER31 Caenorhabditis elegans Cosmid R31, complete s... 38 7.9
66emb|Z70308.1|CEF49E11 Caenorhabditis elegans Cosmid F49E11, comp... 38 7.9
67emb|AL133233.2|CNS01DUA Human chromosome 14 DNA sequence BAC R-3... 38 7.9
68dbj|AP003460.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 38 7.9
69gb|U23171.2| Caenorhabditis elegans cosmid K02A2, complete sequence 38 7.9
70gb|AC174075.1| Homo sapiens chromosome 10 clone WI2-3242N3, comp... 38 7.9
71gb|U90093.1|U90093 Human Chromosome 11 pac pDJ298k13, complete s... 38 7.9
72emb|AL611936.11| Mouse DNA sequence from clone RP23-40G2 on chro... 38 7.9
73emb|AJ000259.1|CEOSM6 Caenorhabditis elegans osm-6 mRNA 38 7.9
74emb|AL590762.1|HSXDPA Homo sapiens chromosome X sequence from 6... 38 7.9 
>emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1
          Length = 833

 Score =  182 bits (92), Expect = 2e-43
 Identities = 108/112 (96%), Gaps = 1/112 (0%)
 Strand = Plus / Minus

                                                                       
Query: 54  ttgacaatcattaaatgaaattgatatgaaaaattaaccacaacttgaaa-cagactcgg 112
           ||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 814 ttgacaatcatcaaatgaaattgatatgaaaaattaaacacaacttgaaatcagactcgg 755

                                                               
Query: 113 agttgaccttacaagcgcacgaacacatgcatcaaattaaaccgacacgctg 164
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 agttgacctcacaagcgcacgaacacatgcatcaaattaaaccgacacgctg 703
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>gb|AC018509.6| Homo sapiens chromosome 10 clone RP11-307B23, complete sequence
          Length = 162877

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 66     aaatgaaattgatatgaaaaat 87
              ||||||||||||||||||||||
Sbjct: 144795 aaatgaaattgatatgaaaaat 144816
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>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence
          Length = 285444

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 17     cacgtgtgggcgttatcattt 37
              |||||||||||||||||||||
Sbjct: 104360 cacgtgtgggcgttatcattt 104380
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>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence
          Length = 142018

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 17    cacgtgtgggcgttatcattt 37
             |||||||||||||||||||||
Sbjct: 73257 cacgtgtgggcgttatcattt 73277
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>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0035I01, complete sequence
          Length = 147813

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 70   gaaattgatatgaaaaattaa 90
            |||||||||||||||||||||
Sbjct: 3137 gaaattgatatgaaaaattaa 3157
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>gb|AC137522.11| Medicago truncatula clone mth2-9h8, complete sequence
          Length = 117720

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 69    tgaaattgatatgaaaaattaacca 93
             |||||||||| ||||||||||||||
Sbjct: 54730 tgaaattgatttgaaaaattaacca 54706
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>gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete sequence
          Length = 158384

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 70    gaaattgatatgaaaaattaa 90
             |||||||||||||||||||||
Sbjct: 58531 gaaattgatatgaaaaattaa 58551
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 70       gaaattgatatgaaaaattaa 90
                |||||||||||||||||||||
Sbjct: 29518635 gaaattgatatgaaaaattaa 29518655
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>emb|AL110479.1|CEY105C5B Caenorhabditis elegans YAC Y105C5B, complete sequence
          Length = 321304

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 89     aaccacaacttgaaacagact 109
              |||||||||||||||||||||
Sbjct: 104610 aaccacaacttgaaacagact 104630
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>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17,
              complete sequence
          Length = 134631

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 70     gaaattgatatgaaaaattaa 90
              |||||||||||||||||||||
Sbjct: 102905 gaaattgatatgaaaaattaa 102925
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>gb|AC122011.3| Mus musculus chromosome 10 clone RP24-352E6, complete sequence
          Length = 181468

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    gaaattgatatgaaaaatta 89
             ||||||||||||||||||||
Sbjct: 13285 gaaattgatatgaaaaatta 13266
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>ref|XM_628995.1| Dictyostelium discoideum hypothetical protein (DDB0191996), partial
           mRNA
          Length = 2070

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 68  atgaaattgatatgaaaaattaac 91
           ||||||||||| ||||||||||||
Sbjct: 408 atgaaattgatttgaaaaattaac 385
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>gb|AC132580.2| Mus musculus BAC clone RP24-388H18 from chromosome 9, complete
            sequence
          Length = 127200

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 59   aatcattaaatgaaattgatatga 82
            |||||||||||||| |||||||||
Sbjct: 2087 aatcattaaatgaatttgatatga 2110
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>gb|AC100120.9| Mus musculus chromosome 10, clone RP23-40I1, complete sequence
          Length = 236895

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    gaaattgatatgaaaaatta 89
             ||||||||||||||||||||
Sbjct: 38058 gaaattgatatgaaaaatta 38077
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>gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, complete sequence
          Length = 198281

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 67     aatgaaattgatatgaaaaa 86
              ||||||||||||||||||||
Sbjct: 195204 aatgaaattgatatgaaaaa 195185
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>gb|AC166078.2| Mus musculus BAC clone RP23-13G1 from chromosome 9, complete sequence
          Length = 225128

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 59     aatcattaaatgaaattgatatga 82
              |||||||||||||| |||||||||
Sbjct: 120397 aatcattaaatgaatttgatatga 120420
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>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     aaattgatatgaaaaattaa 90
              ||||||||||||||||||||
Sbjct: 281659 aaattgatatgaaaaattaa 281678
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>gb|AC158753.8| Mus musculus chromosome 5, clone RP23-301E24, complete sequence
          Length = 190368

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    aatgaaattgatatgaaaaa 86
             ||||||||||||||||||||
Sbjct: 32566 aatgaaattgatatgaaaaa 32547
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>emb|BX664732.7| Mouse DNA sequence from clone RP23-452F17 on chromosome X, complete
             sequence
          Length = 87723

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    taaatgaaattgatatgaaa 84
             ||||||||||||||||||||
Sbjct: 33318 taaatgaaattgatatgaaa 33299
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>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     aaattgatatgaaaaattaa 90
              ||||||||||||||||||||
Sbjct: 282959 aaattgatatgaaaaattaa 282978
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>emb|BX682540.5| Mouse DNA sequence from clone RP23-383O14 on chromosome X, complete
             sequence
          Length = 191028

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    taaatgaaattgatatgaaa 84
             ||||||||||||||||||||
Sbjct: 18249 taaatgaaattgatatgaaa 18230
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>emb|AL671630.10| Mouse DNA sequence from clone RP23-327E13 on chromosome X, complete
             sequence
          Length = 173634

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    taaatgaaattgatatgaaa 84
             ||||||||||||||||||||
Sbjct: 86809 taaatgaaattgatatgaaa 86790
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>gb|AC151473.3| Mus musculus BAC clone RP24-492O15 from chromosome 17, complete
             sequence
          Length = 128797

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 56    gacaatcattaaatgaaat 74
             |||||||||||||||||||
Sbjct: 85511 gacaatcattaaatgaaat 85493
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>gb|AC115719.10| Mus musculus chromosome 18, clone RP24-356J16, complete sequence
          Length = 177037

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 57   acaatcattaaatgaaatt 75
            |||||||||||||||||||
Sbjct: 6919 acaatcattaaatgaaatt 6901
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>gb|AY934044.1| Uncultured alpha proteobacterium clone I3K-121ITS 16S-23S ribosomal
           RNA intergenic spacer, partial sequence; and tRNA-Ala
           and tRNA-Ile genes, complete sequence
          Length = 538

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 62  cattaaatgaaattgatat 80
           |||||||||||||||||||
Sbjct: 437 cattaaatgaaattgatat 419
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>gb|AY933999.1| Uncultured alpha proteobacterium clone I3K-236ITS 16S-23S ribosomal
           RNA intergenic spacer, partial sequence; and tRNA-Ala
           and tRNA-Ile genes, complete sequence
          Length = 505

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 62  cattaaatgaaattgatat 80
           |||||||||||||||||||
Sbjct: 437 cattaaatgaaattgatat 419
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>gb|AY933919.1| Uncultured alpha proteobacterium clone I3K-014ITS3 16S-23S
           ribosomal RNA intergenic spacer, partial sequence; and
           tRNA-Ala and tRNA-Ile genes, complete sequence
          Length = 510

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 62  cattaaatgaaattgatat 80
           |||||||||||||||||||
Sbjct: 437 cattaaatgaaattgatat 419
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>gb|AY933918.1| Uncultured alpha proteobacterium clone I3K-014ITS2 16S-23S
           ribosomal RNA intergenic spacer, partial sequence; and
           tRNA-Ala and tRNA-Ile genes, complete sequence
          Length = 513

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 62  cattaaatgaaattgatat 80
           |||||||||||||||||||
Sbjct: 436 cattaaatgaaattgatat 418
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>gb|AY933917.1| Uncultured alpha proteobacterium clone I3K-014ITS 16S-23S ribosomal
           RNA intergenic spacer, partial sequence; and tRNA-Ala
           and tRNA-Ile genes, complete sequence
          Length = 485

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 62  cattaaatgaaattgatat 80
           |||||||||||||||||||
Sbjct: 437 cattaaatgaaattgatat 419
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>ref|XM_590013.2| PREDICTED: Bos taurus similar to Syntaxin-binding protein 3 (UNC-18
            homolog 3) (UNC-18C) (UNC-18-3) (Platelet Sec1 protein)
            (PSP) (LOC512490), mRNA
          Length = 2455

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 80   tgaaaaattaaccacaact 98
            |||||||||||||||||||
Sbjct: 2115 tgaaaaattaaccacaact 2097
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>gb|AC146144.2| Pan troglodytes BAC clone RP43-37J17 from 7, complete sequence
          Length = 206029

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 71     aaattgatatgaaaaatta 89
              |||||||||||||||||||
Sbjct: 205501 aaattgatatgaaaaatta 205483
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>gb|AC122903.4| Mus musculus BAC clone RP23-44N5 from chromosome 1, complete sequence
          Length = 169832

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 73     attgatatgaaaaattaac 91
              |||||||||||||||||||
Sbjct: 109396 attgatatgaaaaattaac 109414
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>gb|BC010049.2| Homo sapiens non-POU domain containing, octamer-binding, mRNA (cDNA
           clone IMAGE:3833574), partial cds
          Length = 3225

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 83  aaaattaaccacaacttga 101
           |||||||||||||||||||
Sbjct: 612 aaaattaaccacaacttga 594
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>gb|AC146041.2| Pan troglodytes BAC clone RP43-98A7 from 7, complete sequence
          Length = 120644

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 71    aaattgatatgaaaaatta 89
             |||||||||||||||||||
Sbjct: 52722 aaattgatatgaaaaatta 52740
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>gb|AC119745.2| Homo sapiens 3 BAC RP11-629I15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 74326

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 55    tgacaatcattaaatgaaa 73
             |||||||||||||||||||
Sbjct: 11205 tgacaatcattaaatgaaa 11187
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>gb|AE014302.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 2 of
              3 of the complete sequence
          Length = 277196

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 77     atatgaaaaattaaccaca 95
              |||||||||||||||||||
Sbjct: 221558 atatgaaaaattaaccaca 221576
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>gb|AC146378.2| Pan troglodytes BAC clone RP43-93I8 from 7, complete sequence
          Length = 135955

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 71    aaattgatatgaaaaatta 89
             |||||||||||||||||||
Sbjct: 95749 aaattgatatgaaaaatta 95767
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>ref|XM_724036.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01377)
           partial mRNA
          Length = 1593

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 66  aaatgaaattgatatgaaa 84
           |||||||||||||||||||
Sbjct: 708 aaatgaaattgatatgaaa 726
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>gb|AC007384.3| Homo sapiens BAC clone RP11-325F22 from 7, complete sequence
          Length = 170842

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 71     aaattgatatgaaaaatta 89
              |||||||||||||||||||
Sbjct: 155995 aaattgatatgaaaaatta 156013
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>gb|AC092099.4| Homo sapiens BAC clone RP11-616A20 from 7, complete sequence
          Length = 33234

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 71    aaattgatatgaaaaatta 89
             |||||||||||||||||||
Sbjct: 14219 aaattgatatgaaaaatta 14237
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>ref|XM_675135.1| Plasmodium berghei strain ANKA hypothetical protein (PB000851.00.0)
           partial mRNA
          Length = 1581

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 66  aaatgaaattgatatgaaa 84
           |||||||||||||||||||
Sbjct: 690 aaatgaaattgatatgaaa 708
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>gb|AC127168.17| Medicago truncatula clone mth2-15m13, complete sequence
          Length = 117770

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 71     aaattgatatgaaaaatta 89
              |||||||||||||||||||
Sbjct: 114815 aaattgatatgaaaaatta 114797
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>emb|CR376789.4| Zebrafish DNA sequence from clone DKEYP-87A2 in linkage group 6, complete
              sequence
          Length = 190610

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 58     caatcattaaatgaaattg 76
              |||||||||||||||||||
Sbjct: 185749 caatcattaaatgaaattg 185731
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>emb|BX470201.4| Human DNA sequence from clone RP11-32H11 on chromosome 10 Contains
            part of the DOCK1 gene for dedicator of cyto-kinesis 1,
            complete sequence
          Length = 12201

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 84   aaattaaccacaacttgaa 102
            |||||||||||||||||||
Sbjct: 4973 aaattaaccacaacttgaa 4955
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>emb|AL590365.14| Human DNA sequence from clone RP11-455B2 on chromosome 10 Contains the
              gene for a novel thioesterase domain containing protein
              (FLJ11106), the gene for ribonuclease P (38kD) (RPP38), the
              gene for a novel protein (FLJ38219), the gene for a novel
              protein, the NMT2 gene for N-myristoyltransferase 2, the 3'
              end of the gene for a novel protein (LOC221061), a novel
              gene, a pseudogene similar to part of
              glyceraldehyde-3-phosphate dehydrogenase
              (GAPD)(G3PD,GAPDH), a peptidylprolyl isomerase A
              (cyclophilin A) (PPIA)(CYPA,CYPH) pseudogene, a NADH
              dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa
              (NDUFA4)(MLRQ) pseudogene and three CpG islands, complete
              sequence
          Length = 194802

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 59     aatcattaaatgaaattga 77
              |||||||||||||||||||
Sbjct: 103832 aatcattaaatgaaattga 103850
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>emb|AL590225.4| Human DNA sequence from clone RP11-358H7 on chromosome 6 Contains
            part of the gene for a novel protein highly similar to
            FLJ30899, complete sequence
          Length = 65114

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 72   aattgatatgaaaaattaa 90
            |||||||||||||||||||
Sbjct: 1289 aattgatatgaaaaattaa 1271
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>emb|AL139800.10| Human DNA sequence from clone RP11-219L22 on chromosome 13 Contains
             part of the ITGBL1 gene for integrin, beta-like 1 (with
             EGF-like repeat domains), complete sequence
          Length = 99173

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 77    atatgaaaaattaaccaca 95
             |||||||||||||||||||
Sbjct: 95272 atatgaaaaattaaccaca 95290
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>emb|AL021332.1|HS398A12 Human DNA sequence from clone RP3-398A12 on chromosome 6p23-25.1,
             complete sequence
          Length = 90169

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     aaaggcaaacatgccacgt 21
             |||||||||||||||||||
Sbjct: 36580 aaaggcaaacatgccacgt 36562
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>emb|BX005353.8| Zebrafish DNA sequence from clone DKEY-28D10, complete sequence
          Length = 212169

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 57     acaatcattaaatgaaatt 75
              |||||||||||||||||||
Sbjct: 184674 acaatcattaaatgaaatt 184656
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>gb|AC154097.13| Mus musculus chromosome 18, clone RP23-337F6, complete sequence
          Length = 216640

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 57     acaatcattaaatgaaatt 75
              |||||||||||||||||||
Sbjct: 215373 acaatcattaaatgaaatt 215355
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>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 126     agcgcacgaacacatgcatcaaattaa 152
               |||||||||||||||||| ||| ||||
Sbjct: 4160913 agcgcacgaacacatgcaacaacttaa 4160939
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>gb|AC012082.6| Homo sapiens chr3 BAC RP11-420O16 (Roswell Park Cancer Institute Human
              BAC Library) complete sequence
          Length = 158469

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 65     taaatgaaattgatatgaaaaat 87
              ||||||||||||| |||||||||
Sbjct: 104765 taaatgaaattgagatgaaaaat 104787
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>gb|AC092421.2| Homo sapiens chromosome 3 clone RP11-476A24, complete sequence
          Length = 160726

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 69    tgaaattgatatgaaaaat 87
             |||||||||||||||||||
Sbjct: 40670 tgaaattgatatgaaaaat 40688
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>gb|AC008871.5| Homo sapiens chromosome 5 clone CTD-2197I11, complete sequence
          Length = 174138

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 71     aaattgatatgaaaaatta 89
              |||||||||||||||||||
Sbjct: 154447 aaattgatatgaaaaatta 154465
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>ref|NM_171545.4| Caenorhabditis elegans OSMotic avoidance abnormal family member
           (osm-6) (osm-6) mRNA, complete cds
          Length = 1459

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 56  gacaatcattaaatgaaat 74
           |||||||||||||||||||
Sbjct: 305 gacaatcattaaatgaaat 323
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>ref|NM_063154.2| Caenorhabditis elegans K02A2.3 (K02A2.3) mRNA, complete cds
          Length = 3188

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 47  tgtgccattgacaatcatt 65
           |||||||||||||||||||
Sbjct: 835 tgtgccattgacaatcatt 853
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>gb|AC084520.1|CBRG18K16 Caenorhabditis briggsae cosmid G18K16, complete sequence
          Length = 41648

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 71    aaattgatatgaaaaatta 89
             |||||||||||||||||||
Sbjct: 33689 aaattgatatgaaaaatta 33707
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>gb|AC007764.2|AC007764 Genomic sequence for Arabidopsis thaliana BAC F22C12 from chromosome I,
             complete sequence
          Length = 111222

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 135   acacatgcatcaaattaaa 153
             |||||||||||||||||||
Sbjct: 79512 acacatgcatcaaattaaa 79530
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>gb|AC149893.2| Xenopus tropicalis clone ISB-263C13, complete sequence
          Length = 80397

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 76   gatatgaaaaattaaccacaact 98
            |||||||| ||||||||||||||
Sbjct: 9523 gatatgaacaattaaccacaact 9545
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>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 68     atgaaattgatatgaaaaa 86
              |||||||||||||||||||
Sbjct: 388721 atgaaattgatatgaaaaa 388703
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>emb|BX005357.10| Zebrafish DNA sequence from clone CH211-120C8, complete sequence
          Length = 159670

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 70    gaaattgatatgaaaaatt 88
             |||||||||||||||||||
Sbjct: 14221 gaaattgatatgaaaaatt 14203
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>gb|AC002430.1|AC002430 Human BAC clone CTB-66D11 from 7q22, complete sequence
          Length = 140856

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 71     aaattgatatgaaaaatta 89
              |||||||||||||||||||
Sbjct: 136512 aaattgatatgaaaaatta 136530
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>gb|AC009294.8|AC009294 Homo sapiens chromosome 11, clone 579_H_17, complete sequence
          Length = 211316

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 65     taaatgaaattgatatgaaaaat 87
              ||||||||||||| |||||||||
Sbjct: 203863 taaatgaaattgaaatgaaaaat 203885
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>emb|AL929504.9| Zebrafish DNA sequence from clone CH211-155A11 in linkage group 4,
              complete sequence
          Length = 160087

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 137    acatgcatcaaattaaacc 155
              |||||||||||||||||||
Sbjct: 125058 acatgcatcaaattaaacc 125040
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>emb|Z75956.1|CER31 Caenorhabditis elegans Cosmid R31, complete sequence
          Length = 20279

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 56    gacaatcattaaatgaaat 74
             |||||||||||||||||||
Sbjct: 19665 gacaatcattaaatgaaat 19647
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>emb|Z70308.1|CEF49E11 Caenorhabditis elegans Cosmid F49E11, complete sequence
          Length = 32458

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 72    aattgatatgaaaaattaa 90
             |||||||||||||||||||
Sbjct: 11138 aattgatatgaaaaattaa 11156
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>emb|AL133233.2|CNS01DUA Human chromosome 14 DNA sequence BAC R-34O18 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168991

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 65    taaatgaaattgatatgaaaaattaac 91
             ||||||||||||| |||||||| ||||
Sbjct: 52456 taaatgaaattgaaatgaaaaaataac 52482
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>dbj|AP003460.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-285P16, complete
             sequence
          Length = 171738

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 65    taaatgaaattgatatgaaaaat 87
             ||||||||||||| |||||||||
Sbjct: 83799 taaatgaaattgaaatgaaaaat 83777
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>gb|U23171.2| Caenorhabditis elegans cosmid K02A2, complete sequence
          Length = 38261

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 47    tgtgccattgacaatcatt 65
             |||||||||||||||||||
Sbjct: 23068 tgtgccattgacaatcatt 23050
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>gb|AC174075.1| Homo sapiens chromosome 10 clone WI2-3242N3, complete sequence
          Length = 40411

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 84    aaattaaccacaacttgaa 102
             |||||||||||||||||||
Sbjct: 25267 aaattaaccacaacttgaa 25285
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>gb|U90093.1|U90093 Human Chromosome 11 pac pDJ298k13, complete sequence
          Length = 77197

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 55    tgacaatcattaaatgaaa 73
             |||||||||||||||||||
Sbjct: 54078 tgacaatcattaaatgaaa 54096
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>emb|AL611936.11| Mouse DNA sequence from clone RP23-40G2 on chromosome 4, complete
             sequence
          Length = 166167

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 71    aaattgatatgaaaaattaacca 93
             |||||||||| ||||||||||||
Sbjct: 65013 aaattgatataaaaaattaacca 65035
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>emb|AJ000259.1|CEOSM6 Caenorhabditis elegans osm-6 mRNA
          Length = 1476

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 56  gacaatcattaaatgaaat 74
           |||||||||||||||||||
Sbjct: 305 gacaatcattaaatgaaat 323
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>emb|AL590762.1|HSXDPA Homo sapiens chromosome X  sequence from 6 PACs 1 BAC and 1 cosmid,
              region GJB1-DXS559 map Xq13.1; segment 1/2, complete
              sequence
          Length = 305000

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 83     aaaattaaccacaacttga 101
              |||||||||||||||||||
Sbjct: 134188 aaaattaaccacaacttga 134170


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,506,757
Number of Sequences: 3902068
Number of extensions: 1506757
Number of successful extensions: 113676
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113335
Number of HSP's gapped (non-prelim): 340
length of query: 164
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 142
effective length of database: 17,147,199,772
effective search space: 2434902367624
effective search space used: 2434902367624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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