>YVAU_VACCC (P20530) Hypothetical 8.8 kDa protein|
          Length = 72

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = -2

Query: 248 SVRACSYFSSCRFCLYLFVRWC*STCVVNCVAAQPWRTRSFTYR 117
           S+  C +   C +C+      C   C++  + +  +R+R F YR
Sbjct: 12  SLVCCGFSRCCTYCINAITSVCDGVCMIFYIISNWFRSRDFEYR 55

>XIST_MOUSE (P27571) X inactive-specific transcript protein (Fragment)|
          Length = 298

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
 Frame = -1

Query: 174 VCC*LCSCSAMADPQLYLQILSLYFGVNYANT----TWLLFCLYYCLC 43
           +C  LC    ++     L I SLY  V+   +    +W+  C+Y C+C
Sbjct: 238 LCVCLCFYLLLSSFLFTLSISSLYKSVSLLYSKVILSWMFLCMYMCVC 285


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,467,359
Number of Sequences: 219361
Number of extensions: 650790
Number of successful extensions: 1769
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1768
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)