ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet124g01 |
|---|---|
| Clone Library Name | barley_pub |
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 57.0 bits (136), Expect = 1e-08 Identities = 25/33 (75%), Positives = 28/33 (84%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNNLLTVISGAAERVPS 241 G+GP ENL HLSDPFGNNLLTVI+G AER P+ Sbjct: 247 GEGPVENLAKHLSDPFGNNLLTVIAGTAERAPT 279
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 35.4 bits (80), Expect = 0.035 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNNLL 277 GKGPFENL HLSDP+ N ++ Sbjct: 227 GKGPFENLLQHLSDPWHNTIV 247
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 34.3 bits (77), Expect = 0.079 Identities = 14/19 (73%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HLSDP NN Sbjct: 238 GKGPLENLADHLSDPVNNN 256
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 33.9 bits (76), Expect = 0.10 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNNLLT 274 G GP++NL HL+DP NN+LT Sbjct: 247 GVGPYQNLLDHLADPVNNNVLT 268
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 33.5 bits (75), Expect = 0.13 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNNLLTVI 268 G GP ENL HL+DP+ NN+ VI Sbjct: 215 GTGPLENLATHLADPWHNNIGDVI 238
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 226 GKGPLENLADHLADPVNNN 244
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 231 GKGPLENLADHLADPVNNN 249
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 198 GKGPLENLADHLADPVNNN 216
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 237 GKGPLENLADHLADPVNNN 255
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 237 GKGPLENLADHLADPVNNN 255
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 237 GKGPLENLADHLADPVNNN 255
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 237 GKGPLENLADHLADPVNNN 255
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 237 GKGPLENLADHLADPVNNN 255
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 237 GKGPLENLADHLADPVNNN 255
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 237 GKGPLENLADHLADPVNNN 255
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 239 GKGPLENLADHLADPVNNN 257
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 237 GKGPIENLADHLADPVNNN 255
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 237 GKGPIENLADHLADPVNNN 255
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 86 GKGPLENLADHLADPVNNN 104
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 248 GKGPIENLADHLADPVNNN 266
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 248 GKGPIENLADHLADPVNNN 266
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 176 GKGPLENLADHLADPVNNN 194
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 235 GKGPLENLADHLADPVNNN 253
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 244 GKGPIENLADHLADPVNNN 262
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 235 GKGPLENLADHLADPVNNN 253
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 235 GKGPLENLADHLADPVNNN 253
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 235 GKGPLENLADHLADPVNNN 253
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 235 GKGPLENLADHLADPVNNN 253
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 235 GKGPLENLADHLADPVNNN 253
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 225 GKGPLENLADHLADPVNNN 243
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 234 GKGPIENLADHLTDPVNNN 252
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 236 GKGPLENLADHLADPVNNN 254
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 236 GKGPLENLADHLADPVNNN 254
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 234 GKGPLENLADHLADPVNNN 252
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 234 GKGPLENLADHLADPVNNN 252
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 236 GKGPLENLADHLADPVNNN 254
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 236 GKGPLENLADHLADPVNNN 254
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 236 GKGPLENLADHLADPVNNN 254
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 33.1 bits (74), Expect = 0.18 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 94 GKGPLENLADHLADPVNNN 112
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 32.3 bits (72), Expect = 0.30 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 120 GKGPIENLYDHLADPVANN 138
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 32.3 bits (72), Expect = 0.30 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL H++DP NN Sbjct: 232 GKGPLENLADHIADPVNNN 250
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 32.3 bits (72), Expect = 0.30 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL H++DP NN Sbjct: 237 GKGPLENLADHIADPVNNN 255
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 32.3 bits (72), Expect = 0.30 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL H++DP NN Sbjct: 237 GKGPLENLADHIADPVNNN 255
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 32.3 bits (72), Expect = 0.30 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL H++DP NN Sbjct: 234 GKGPIENLADHIADPVANN 252
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 32.3 bits (72), Expect = 0.30 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL H++DP NN Sbjct: 235 GKGPLENLADHIADPVNNN 253
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 32.3 bits (72), Expect = 0.30 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 236 GKGPIENLYDHLADPVANN 254
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 32.3 bits (72), Expect = 0.30 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 235 GKGPIENLFDHLADPVANN 253
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 32.0 bits (71), Expect = 0.39 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL H++DP NN Sbjct: 207 GKGPIENLSDHIADPVANN 225
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 32.0 bits (71), Expect = 0.39 Identities = 13/19 (68%), Positives = 13/19 (68%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL DP NN Sbjct: 238 GKGPLENLFDHLDDPVANN 256
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 32.0 bits (71), Expect = 0.39 Identities = 13/19 (68%), Positives = 13/19 (68%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL DP NN Sbjct: 237 GKGPLENLADHLVDPVNNN 255
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 32.0 bits (71), Expect = 0.39 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 238 GKGPLENLNDHLADPVANN 256
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 32.0 bits (71), Expect = 0.39 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL H++DP NN Sbjct: 235 GKGPIENLSDHINDPVANN 253
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 31.6 bits (70), Expect = 0.51 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP +NL HL+DP NN Sbjct: 237 GKGPLDNLVDHLADPVNNN 255
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 31.6 bits (70), Expect = 0.51 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL++P NN Sbjct: 215 GKGPLENLADHLAEPVNNN 233
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 31.2 bits (69), Expect = 0.67 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL H++DP NN Sbjct: 233 GKGPIENLFDHVADPVANN 251
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 31.2 bits (69), Expect = 0.67 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL H++DP NN Sbjct: 235 GKGPIENLYDHVADPVANN 253
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 31.2 bits (69), Expect = 0.67 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL H++DP NN Sbjct: 235 GKGPIENLFDHVADPVANN 253
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 31.2 bits (69), Expect = 0.67 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+DP NN Sbjct: 235 GKGPIENLSDHLADPAVNN 253
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP +NL HL+DP NN Sbjct: 226 GKGPIQNLADHLADPGTNN 244
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL+ P NN Sbjct: 233 GKGPLENLADHLAGPVNNN 251
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL +P NN Sbjct: 235 GKGPLENLLDHLDNPVANN 253
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 30.4 bits (67), Expect = 1.1 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP E+L H++DP NN Sbjct: 236 GKGPLEDLADHIADPVNNN 254
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 30.0 bits (66), Expect = 1.5 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP +NL H++DP NN Sbjct: 235 GKGPIQNLYDHVADPVANN 253
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNN 283 GKGP ENL HL++P NN Sbjct: 244 GKGPIENLTDHLANPAENN 262
>USE1_HUMAN (Q9NZ43) USE1-like protein (Hematopoietic stem/progenitor cells| protein MDS032) (Putative MAPK-activating protein PM26) (Protein p31) Length = 259 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = +2 Query: 131 LFPGKIHTAHHAASHARMQLSINSRRRRTGNQRPAHRLGTLSAAPEMTVSR 283 L PG++ T A + + SR R T R + LGT SA PEM V + Sbjct: 90 LAPGRVPTTARERVPATKTVHLQSRARYTSEMR-SELLGTDSAEPEMDVRK 139
>DUS10_MOUSE (Q9ESS0) Dual specificity protein phosphatase 10 (EC 3.1.3.48) (EC| 3.1.3.16) (Mitogen-activated protein kinase phosphatase 5) (MAP kinase phosphatase 5) (MKP-5) Length = 483 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 154 STSCCIARTHAAEHQQPTAADGQSTASSQAG 246 STSCC T+ +HQ T A TA++ G Sbjct: 77 STSCCTVATYDKDHQAQTQAIAAGTATTAIG 107
>NMDE1_RAT (Q00959) Glutamate [NMDA] receptor subunit epsilon 1 precursor| (N-methyl D-aspartate receptor subtype 2A) (NR2A) (NMDAR2A) Length = 1464 Score = 29.3 bits (64), Expect = 2.5 Identities = 11/34 (32%), Positives = 21/34 (61%) Frame = +3 Query: 60 SEIRTVMFLLPLIIYTYGTFVLSYFSPVKFTQHI 161 + + +MF++ LI+ FV YFSPV + +++ Sbjct: 555 ASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNL 588
>NMDE1_PANTR (Q5IS45) Glutamate [NMDA] receptor subunit epsilon 1 precursor| (N-methyl D-aspartate receptor subtype 2A) (NR2A) (NMDAR2A) Length = 1464 Score = 29.3 bits (64), Expect = 2.5 Identities = 11/34 (32%), Positives = 21/34 (61%) Frame = +3 Query: 60 SEIRTVMFLLPLIIYTYGTFVLSYFSPVKFTQHI 161 + + +MF++ LI+ FV YFSPV + +++ Sbjct: 555 ASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNL 588
>NMDE1_MOUSE (P35436) Glutamate [NMDA] receptor subunit epsilon 1 precursor| (N-methyl D-aspartate receptor subtype 2A) (NR2A) (NMDAR2A) Length = 1464 Score = 29.3 bits (64), Expect = 2.5 Identities = 11/34 (32%), Positives = 21/34 (61%) Frame = +3 Query: 60 SEIRTVMFLLPLIIYTYGTFVLSYFSPVKFTQHI 161 + + +MF++ LI+ FV YFSPV + +++ Sbjct: 555 ASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNL 588
>NMDE1_HUMAN (Q12879) Glutamate [NMDA] receptor subunit epsilon 1 precursor| (N-methyl D-aspartate receptor subtype 2A) (NR2A) (NMDAR2A) (hNR2A) Length = 1464 Score = 29.3 bits (64), Expect = 2.5 Identities = 11/34 (32%), Positives = 21/34 (61%) Frame = +3 Query: 60 SEIRTVMFLLPLIIYTYGTFVLSYFSPVKFTQHI 161 + + +MF++ LI+ FV YFSPV + +++ Sbjct: 555 ASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNL 588
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 5/34 (14%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNNLLTVI-----SGAAE 253 G+ P NL AHL++P G N+ T + SGA E Sbjct: 336 GESPLANLSAHLANPIGANITTNLAMFASSGAKE 369
>NMDE2_RAT (Q00960) Glutamate [NMDA] receptor subunit epsilon 2 precursor| (N-methyl D-aspartate receptor subtype 2B) (NR2B) (NMDAR2B) Length = 1482 Score = 28.9 bits (63), Expect = 3.3 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = +3 Query: 60 SEIRTVMFLLPLIIYTYGTFVLSYFSPVKFTQ 155 +++ +MF++ LI+ FV YFSPV + + Sbjct: 556 ADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNR 587
>NMDE2_MOUSE (Q01097) Glutamate [NMDA] receptor subunit epsilon 2 precursor| (N-methyl D-aspartate receptor subtype 2B) (NR2B) (NMDAR2B) Length = 1482 Score = 28.9 bits (63), Expect = 3.3 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = +3 Query: 60 SEIRTVMFLLPLIIYTYGTFVLSYFSPVKFTQ 155 +++ +MF++ LI+ FV YFSPV + + Sbjct: 556 ADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNR 587
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 28.9 bits (63), Expect = 3.3 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNNLLTVISGA 259 GKGP N HLSDP ++ S + Sbjct: 264 GKGPLNNWATHLSDPLHTTIIDTFSSS 290
>NMDE2_HUMAN (Q13224) Glutamate [NMDA] receptor subunit epsilon 2 precursor| (N-methyl D-aspartate receptor subtype 2B) (NR2B) (NMDAR2B) (N-methyl-D-aspartate receptor subunit 3) (NR3) (hNR3) Length = 1484 Score = 28.9 bits (63), Expect = 3.3 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = +3 Query: 60 SEIRTVMFLLPLIIYTYGTFVLSYFSPVKFTQ 155 +++ +MF++ LI+ FV YFSPV + + Sbjct: 556 ADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNR 587
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 28.9 bits (63), Expect = 3.3 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNNLLTVISGA 259 GKGP N HLSDP ++ S + Sbjct: 261 GKGPLNNWATHLSDPLHTTIIDTFSSS 287
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNNLLTVI 268 G+GP EN HL DP +N LT + Sbjct: 92 GEGPVENWLYHLQDPSAHNGLTAL 115
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 28.5 bits (62), Expect = 4.3 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGNNLLTVIS 265 G+ P NL AH ++P G N+ T ++ Sbjct: 307 GESPLANLAAHFANPVGANITTTLA 331
>NMDE3_RAT (Q00961) Glutamate [NMDA] receptor subunit epsilon 3 precursor| (N-methyl D-aspartate receptor subtype 2C) (NR2C) (NMDAR2C) Length = 1237 Score = 27.7 bits (60), Expect = 7.4 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = +3 Query: 75 VMFLLPLIIYTYGTFVLSYFSPVKFTQHI 161 +MF++ L + F+ YFSPV + Q++ Sbjct: 558 MMFVMCLTVVAITVFMFEYFSPVSYNQNL 586
>GLMS_PYRFU (Q8U4D1) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 597 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +3 Query: 48 PKLPSEIRTVMFLLPLIIYTYGTFVLSYFSP 140 PKLP EI +++++PL + Y VL +P Sbjct: 554 PKLPEEITPIVYIVPLQLLAYHLAVLRGNNP 584
>NMDE3_HUMAN (Q14957) Glutamate [NMDA] receptor subunit epsilon 3 precursor| (N-methyl D-aspartate receptor subtype 2C) (NR2C) (NMDAR2C) Length = 1233 Score = 27.7 bits (60), Expect = 7.4 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = +3 Query: 75 VMFLLPLIIYTYGTFVLSYFSPVKFTQHI 161 +MF++ L + F+ YFSPV + Q++ Sbjct: 558 MMFVMCLTVVAITVFMFEYFSPVSYNQNL 586
>DCNL4_BRARE (Q5RHX6) DCN1-like protein 4 (Defective in cullin neddylation| protein 1-like protein 4) (DCUN1 domain-containing protein 4) Length = 280 Score = 27.7 bits (60), Expect = 7.4 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 8/50 (16%) Frame = +1 Query: 115 HSYSHTFPR*N--------SHSTSCCIARTHAAEHQQPTAADGQSTASSQ 240 H HT R N SH T+CC + ++PTA D S S+ Sbjct: 21 HKIYHTLHRLNLTEDVGPESHGTACCSRAMPPRKKRRPTAGDDLSAKKSR 70
>NMDE3_MOUSE (Q01098) Glutamate [NMDA] receptor subunit epsilon 3 precursor| (N-methyl D-aspartate receptor subtype 2C) (NR2C) (NMDAR2C) Length = 1239 Score = 27.7 bits (60), Expect = 7.4 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = +3 Query: 75 VMFLLPLIIYTYGTFVLSYFSPVKFTQHI 161 +MF++ L + F+ YFSPV + Q++ Sbjct: 558 MMFVMCLTVVAITVFMFEYFSPVSYNQNL 586
>MURD_XYLFA (Q9PEB0) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 468 Score = 27.7 bits (60), Expect = 7.4 Identities = 18/53 (33%), Positives = 23/53 (43%) Frame = +2 Query: 161 HAASHARMQLSINSRRRRTGNQRPAHRLGTLSAAPEMTVSRLLPKGSLRWAHR 319 H H Q IN + RP R+ L+AA S LP+ LRW +R Sbjct: 198 HLDWHGSEQRYINDKLSLVTVTRP--RIALLNAADPRLASLALPQSDLRWFNR 248
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 27.3 bits (59), Expect = 9.6 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = -3 Query: 339 GKGPFENLCAHLSDPFGN 286 GKGP +NL HL+DP N Sbjct: 223 GKGPVQNLTDHLADPTVN 240
>CRE1_NEUCR (O59958) DNA-binding protein cre-1 (Carbon catabolite repressor)| Length = 430 Score = 27.3 bits (59), Expect = 9.6 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 10/55 (18%) Frame = +2 Query: 110 RHIRT-------LILFPG---KIHTAHHAASHARMQLSINSRRRRTGNQRPAHRL 244 RHIRT FPG K + H+R+ + NSRR G Q+ H L Sbjct: 95 RHIRTHTGEKPHACQFPGCSKKFSRSDELTRHSRIHSNPNSRRGNKGQQQQQHPL 149 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,681,707 Number of Sequences: 219361 Number of extensions: 811558 Number of successful extensions: 2264 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 2216 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2264 length of database: 80,573,946 effective HSP length: 89 effective length of database: 61,050,817 effective search space used: 1465219608 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
