ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet124e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018226.1| Zea mays clone EL01N0561F09.c mRNA sequence 115 5e-23
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 96 4e-17
3gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare str... 96 4e-17
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 96 4e-17
5dbj|AK104137.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 4e-17
6dbj|AK098999.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 4e-17
7dbj|AK072141.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 4e-17
8dbj|AK070779.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 4e-17
9dbj|AK059557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 4e-17
10gb|AF095708.1|AF095708 Oryza sativa clone LS101 50S ribosomal pr... 88 1e-14
11gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 56 4e-05
12gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 54 1e-04
13dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 50 0.002
14gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 0.54
15dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 0.54
16gb|AF023909.1|AF023909 Rhodobacter sphaeroides nitrogen regulato... 42 0.54
17ref|XM_482867.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.1
18ref|XM_482863.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.1
19gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 2.1
20gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 2.1
21gb|AY124963.1| Tomato spotted wilt virus isolate TSWV-FG31 non-s... 40 2.1
22emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genom... 40 2.1
23gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 2.1
24gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 2.1
25dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.1
26gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 40 2.1
27dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 2.1
28dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic D... 40 2.1
29dbj|AK121810.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.1
30dbj|AK102363.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.1
31emb|X15819.1|OSNIA112 Oryza sativa partial nia1 gene for nitrate... 40 2.1
32gb|AY688304.2| Symbiont bacterium of Theonella swinhoei clone 1e... 38 8.4
33ref|XM_629113.1| Dictyostelium discoideum hypothetical protein (... 38 8.4
34ref|NM_196195.1| Oryza sativa (japonica cultivar-group) putative... 38 8.4
35ref|XM_363985.1| Magnaporthe grisea 70-15 hypothetical protein (... 38 8.4
36ref|XM_370178.1| Magnaporthe grisea 70-15 chromosome II hypothet... 38 8.4
37gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome ... 38 8.4
38gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 38 8.4
39ref|XM_755956.1| Ustilago maydis 521 hypothetical protein (UM049... 38 8.4
40emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 38 8.4
41gb|AC106739.5| Homo sapiens chromosome 16 clone CTD-3203P2, comp... 38 8.4
42gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare str... 38 8.4
43emb|BX323992.9| Zebrafish DNA sequence from clone DKEY-185B14 in... 38 8.4
44dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 38 8.4
45gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare str... 38 8.4
46gb|S57066.1| cydA=cytochrome d oxidase complex subunit I, cydB=c... 38 8.4
47gb|AC149363.2| Phakopsora pachyrhizi clone JGIAFNA-53G11, comple... 38 8.4
48dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.4
49dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.4
50gb|AC012181.8| Homo sapiens chromosome 16 clone RP11-325K4, comp... 38 8.4
51gb|AC011298.7| Homo sapiens BAC clone RP11-118M12 from 2, comple... 38 8.4
52gb|AC112784.5| Homo sapiens BAC clone RP13-555N8 from 2, complet... 38 8.4
53dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 38 8.4
54emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 i... 38 8.4
55dbj|AK101051.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.4
56emb|BX901966.21| Zebrafish DNA sequence from clone DKEY-119B16 i... 38 8.4
57gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 8.4
58gb|M77787.1|AVICYDAB Azotobacter vinelandii cytochrome d subunit... 38 8.4 
>gb|BT018226.1| Zea mays clone EL01N0561F09.c mRNA sequence
          Length = 923

 Score =  115 bits (58), Expect = 5e-23
 Identities = 147/176 (83%), Gaps = 3/176 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgcccttgctaatgaagtggtggcgcttcaacctcttcttcttgaactg---gtcagact 57
           |||||||||| | ||||||| ||||||||||||||||||||  || |     ||| | ||
Sbjct: 721 tgcccttgctcaggaagtgggggcgcttcaacctcttcttccggatcaccacgtcggtct 662

                                                                       
Query: 58  tgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttgtcgg 117
           |||||||||| | ||| ||||||||||||||  | | ||||||   |||||||||||| |
Sbjct: 661 tgatgttctccgagaacggcatgccgaggaggaccaccagcctgaacgcctcgttgtccg 602

                                                                   
Query: 118 tcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 173
           |||||||| ||||||||||||  |||||||| ||||||||||| ||||||||||||
Sbjct: 601 tcttggcgctggtgacgatggacacgtccatgccgttcttcttcccgcccacctcg 546
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 102/120 (85%)
 Strand = Plus / Plus

                                                                           
Query: 54      gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 113
               |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 1413671 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 1413730

                                                                           
Query: 114     tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 173
               |||||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 1413731 tcggtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 1413790



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                        
Query: 1       tgcccttgctaatgaagtggtggcgcttcaacctcttcttc 41
               |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1413615 tgcccttgctcatgaagtggtggcgcttcaacctcttcttc 1413655
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>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11,
             from chromosome 3, complete sequence
          Length = 147806

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 102/120 (85%)
 Strand = Plus / Plus

                                                                         
Query: 54    gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 113
             |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 75174 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 75233

                                                                         
Query: 114   tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 173
             |||||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 75234 tcggtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 75293



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                      
Query: 1     tgcccttgctaatgaagtggtggcgcttcaacctcttcttc 41
             |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 75118 tgcccttgctcatgaagtggtggcgcttcaacctcttcttc 75158
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 102/120 (85%)
 Strand = Plus / Plus

                                                                           
Query: 54      gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 113
               |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 1413669 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 1413728

                                                                           
Query: 114     tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 173
               |||||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 1413729 tcggtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 1413788



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                        
Query: 1       tgcccttgctaatgaagtggtggcgcttcaacctcttcttc 41
               |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1413613 tgcccttgctcatgaagtggtggcgcttcaacctcttcttc 1413653
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>dbj|AK104137.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H07, full
           insert sequence
          Length = 1009

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 102/120 (85%)
 Strand = Plus / Minus

                                                                       
Query: 54  gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 113
           |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 778 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 719

                                                                       
Query: 114 tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 173
           |||||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 718 tcggtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 659



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                    
Query: 1   tgcccttgctaatgaagtggtggcgcttcaacctcttcttc 41
           |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 834 tgcccttgctcatgaagtggtggcgcttcaacctcttcttc 794
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>dbj|AK098999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N22, full
           insert sequence
          Length = 1011

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 102/120 (85%)
 Strand = Plus / Minus

                                                                       
Query: 54  gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 113
           |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 785 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 726

                                                                       
Query: 114 tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 173
           |||||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 725 tcggtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 666



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                    
Query: 1   tgcccttgctaatgaagtggtggcgcttcaacctcttcttc 41
           |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 841 tgcccttgctcatgaagtggtggcgcttcaacctcttcttc 801
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>dbj|AK072141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122I07, full
           insert sequence
          Length = 2916

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 102/120 (85%)
 Strand = Plus / Plus

                                                                       
Query: 54  gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 113
           |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 329 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 388

                                                                       
Query: 114 tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 173
           |||||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 389 tcggtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 448



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                    
Query: 1   tgcccttgctaatgaagtggtggcgcttcaacctcttcttc 41
           |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 273 tgcccttgctcatgaagtggtggcgcttcaacctcttcttc 313
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>dbj|AK070779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072F09, full
           insert sequence
          Length = 1044

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 102/120 (85%)
 Strand = Plus / Minus

                                                                       
Query: 54  gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 113
           |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 807 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 748

                                                                       
Query: 114 tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 173
           |||||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 747 tcggtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 688



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                    
Query: 1   tgcccttgctaatgaagtggtggcgcttcaacctcttcttc 41
           |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 863 tgcccttgctcatgaagtggtggcgcttcaacctcttcttc 823
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>dbj|AK059557.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G09, full
           insert sequence
          Length = 1013

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 102/120 (85%)
 Strand = Plus / Minus

                                                                       
Query: 54  gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 113
           |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 782 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 723

                                                                       
Query: 114 tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 173
           |||||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 722 tcggtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 663



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                    
Query: 1   tgcccttgctaatgaagtggtggcgcttcaacctcttcttc 41
           |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 838 tgcccttgctcatgaagtggtggcgcttcaacctcttcttc 798
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>gb|AF095708.1|AF095708 Oryza sativa clone LS101 50S ribosomal protein L5 (rpl5) mRNA,
           nuclear gene encoding chloroplast protein, partial cds
          Length = 1025

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 101/120 (84%)
 Strand = Plus / Minus

                                                                       
Query: 54  gacttgatgttctcggcgaatggcatgccgaggagtgcaagcagcctttgcgcctcgttg 113
           |||||||||| ||| ||||| |||||||| ||||| |  ||||||||  | |||||||||
Sbjct: 774 gacttgatgtgctccgcgaacggcatgccaaggagggtgagcagcctgagagcctcgttg 715

                                                                       
Query: 114 tcggtcttggcggtggtgacgatggtgacgtccataccgttcttcttgccgcccacctcg 173
           || ||||| |||||||||||||||  ||||||||| || |||||||| || || ||||||
Sbjct: 714 tccgtcttcgcggtggtgacgatgcagacgtccattccattcttcttcccaccgacctcg 655



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                    
Query: 1   tgcccttgctaatgaagtggtggcgcttcaacctcttcttc 41
           |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 830 tgcccttgctcatgaagtggtggcgcttcaacctcttcttc 790
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                  
Query: 113    gtcggtcttggcggtggtgacgatggtgacgtccat 148
              |||||||||||||||||| |||||||||| ||||||
Sbjct: 318768 gtcggtcttggcggtggtcacgatggtgatgtccat 318733
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                              
Query: 111     ttgtcggtcttggcggtggtgacgatggtga 141
               ||||||||| |||||||||||||||||||||
Sbjct: 1399346 ttgtcggtcgtggcggtggtgacgatggtga 1399316
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                            
Query: 104     cgcctcgttgtcggtcttggcggtggtgacgatggtgacgtccat 148
               |||||| | ||||||||||||||| ||||||||| | ||||||||
Sbjct: 3269086 cgcctcttcgtcggtcttggcggtcgtgacgatgatcacgtccat 3269130
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 111     ttgtcggtcttggcggtggtg 131
               |||||||||||||||||||||
Sbjct: 2637964 ttgtcggtcttggcggtggtg 2637984
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                
Query: 104     cgcctcgttgtcggtcttggcggtggtgacgatggtgacgtccataccg 152
               |||||| | |||||||||||| ||||||  || ||||| ||||||||||
Sbjct: 5930434 cgcctcttcgtcggtcttggccgtggtgcagacggtgatgtccataccg 5930482



 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 123     gcggtggtgacgatggtgacgtc 145
               |||||| ||||||||||||||||
Sbjct: 6442717 gcggtgttgacgatggtgacgtc 6442739
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>gb|AF023909.1|AF023909 Rhodobacter sphaeroides nitrogen regulatory protein GlnK (glnK)
           gene, complete cds; and putative ammonia transporter
           (amtB) gene, partial cds
          Length = 1142

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 111 ttgtcggtcttggcggtggtg 131
           |||||||||||||||||||||
Sbjct: 841 ttgtcggtcttggcggtggtg 821
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>ref|XM_482867.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2751

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 110 gttgtcggtcttggcggtggtgacgatg 137
           |||||||| || ||||||||||||||||
Sbjct: 972 gttgtcggactcggcggtggtgacgatg 945
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>ref|XM_482863.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3147

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 110  gttgtcggtcttggcggtggtgacgatg 137
            |||||||| || ||||||||||||||||
Sbjct: 1092 gttgtcggactcggcggtggtgacgatg 1065
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                       
Query: 113     gtcggtcttggcggtggtgacgatggtgacgtccataccg 152
               |||| ||||||||||||| ||||  |||| ||||||||||
Sbjct: 2077203 gtcgttcttggcggtggtcacgaccgtgatgtccataccg 2077242
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 124     cggtggtgacgatggtgacg 143
               ||||||||||||||||||||
Sbjct: 2351553 cggtggtgacgatggtgacg 2351534
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>gb|AY124963.1| Tomato spotted wilt virus isolate TSWV-FG31 non-structural protein
           (NSm) mRNA, partial cds
          Length = 688

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 26  cttcaacctcttcttcttgaactg 49
           |||||||||||||||||| |||||
Sbjct: 679 cttcaacctcttcttcttcaactg 656
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>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    gtggtgacgatggtgacgtc 145
              ||||||||||||||||||||
Sbjct: 100611 gtggtgacgatggtgacgtc 100630
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 111     ttgtcggtcttggcggtggt 130
               ||||||||||||||||||||
Sbjct: 4161579 ttgtcggtcttggcggtggt 4161560
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 124     cggtggtgacgatggtgacg 143
               ||||||||||||||||||||
Sbjct: 3825539 cggtggtgacgatggtgacg 3825558
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 110      gttgtcggtcttggcggtggtgacgatg 137
                |||||||| || ||||||||||||||||
Sbjct: 23047363 gttgtcggactcggcggtggtgacgatg 23047390



 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 110      gttgtcggtcttggcggtggtgacgatg 137
                |||||||| || ||||||||||||||||
Sbjct: 23027079 gttgtcggactcggcggtggtgacgatg 23027052
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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 39     ttcttgaactggtcagacttgatgttct 66
              ||||||| ||||||| ||||||||||||
Sbjct: 979145 ttcttgatctggtcatacttgatgttct 979118
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 114     tcggtcttggcggtggtgacgatg 137
               ||||| ||||||||||||||||||
Sbjct: 1129386 tcggtgttggcggtggtgacgatg 1129409
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>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470B03
          Length = 163371

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 110    gttgtcggtcttggcggtggtgacgatg 137
              |||||||| || ||||||||||||||||
Sbjct: 107091 gttgtcggactcggcggtggtgacgatg 107118



 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 110   gttgtcggtcttggcggtggtgacgatg 137
             |||||||| || ||||||||||||||||
Sbjct: 86807 gttgtcggactcggcggtggtgacgatg 86780
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>dbj|AK121810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098A20, full
            insert sequence
          Length = 3147

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 110  gttgtcggtcttggcggtggtgacgatg 137
            |||||||| || ||||||||||||||||
Sbjct: 1092 gttgtcggactcggcggtggtgacgatg 1065
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>dbj|AK102363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091J17, full
           insert sequence
          Length = 2361

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 110 gttgtcggtcttggcggtggtgacgatg 137
           |||||||| || ||||||||||||||||
Sbjct: 349 gttgtcggactcggcggtggtgacgatg 322
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>emb|X15819.1|OSNIA112 Oryza sativa partial nia1 gene for nitrate reductase apoenzyme, exons
            1-2 and joined CDS
          Length = 1700

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 110  gttgtcggtcttggcggtggtgacgatg 137
            |||||||| || ||||||||||||||||
Sbjct: 1259 gttgtcggactcggcggtggtgacgatg 1232
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>gb|AY688304.2| Symbiont bacterium of Theonella swinhoei clone 1e4 onnamide
             biosynthesis genes, partial sequence
          Length = 36513

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    tctcggcgaatggcatgcc 82
             |||||||||||||||||||
Sbjct: 22518 tctcggcgaatggcatgcc 22536
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>ref|XM_629113.1| Dictyostelium discoideum hypothetical protein (DDB0191962), partial
           mRNA
          Length = 5355

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 26  cttcaacctcttcttcttgaact 48
           ||||||| |||||||||||||||
Sbjct: 139 cttcaacttcttcttcttgaact 117
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>ref|NM_196195.1| Oryza sativa (japonica cultivar-group) putative polyprotein
            (OSJNBa0019N10.13), mRNA
          Length = 2457

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 23   gcgcttcaacctcttcttc 41
            |||||||||||||||||||
Sbjct: 2197 gcgcttcaacctcttcttc 2179
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>ref|XM_363985.1| Magnaporthe grisea 70-15 hypothetical protein (MG08830.4) partial
           cds
          Length = 951

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 149 accgttcttcttgccgccc 167
           |||||||||||||||||||
Sbjct: 906 accgttcttcttgccgccc 888



 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 149 accgttcttcttgccgccc 167
           |||||||||||||||||||
Sbjct: 519 accgttcttcttgccgccc 501



 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 149 accgttcttcttgccgccc 167
           |||||||||||||||||||
Sbjct: 387 accgttcttcttgccgccc 369



 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 149 accgttcttcttgccgccc 167
           |||||||||||||||||||
Sbjct: 255 accgttcttcttgccgccc 237
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>ref|XM_370178.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein
           (MG06675.4) partial mRNA
          Length = 1878

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 125 ggtggtgacgatggtgacg 143
           |||||||||||||||||||
Sbjct: 176 ggtggtgacgatggtgacg 158
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>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
             OSJNBa0035B22, complete sequence
          Length = 155788

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 111   ttgtcggtcttggcggtgg 129
             |||||||||||||||||||
Sbjct: 40149 ttgtcggtcttggcggtgg 40167
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 121     tggcggtggtgacgatggt 139
               |||||||||||||||||||
Sbjct: 3026834 tggcggtggtgacgatggt 3026852
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>ref|XM_755956.1| Ustilago maydis 521 hypothetical protein (UM04902.1) partial mRNA
          Length = 1140

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 138 gtgacgtccataccgttct 156
           |||||||||||||||||||
Sbjct: 173 gtgacgtccataccgttct 155
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 113     gtcggtcttggcggtggtg 131
               |||||||||||||||||||
Sbjct: 5111522 gtcggtcttggcggtggtg 5111540
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>gb|AC106739.5| Homo sapiens chromosome 16 clone CTD-3203P2, complete sequence
          Length = 150762

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 121   tggcggtggtgacgatggtgacg 143
             ||||||||||||||||| |||||
Sbjct: 58564 tggcggtggtgacgatgttgacg 58586



 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 121   tggcggtggtgacgatggtgacg 143
             ||||||||||||||||| |||||
Sbjct: 58525 tggcggtggtgacgatgttgacg 58547



 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 121   tggcggtggtgacgatggtgacg 143
             ||||||||||||||||| |||||
Sbjct: 58486 tggcggtggtgacgatgttgacg 58508



 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 121   tggcggtggtgacgatggtgacg 143
             ||||||||||||||||| |||||
Sbjct: 58447 tggcggtggtgacgatgttgacg 58469



 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 121   tggcggtggtgacgatggtgacg 143
             ||||||||||||||||| |||||
Sbjct: 58408 tggcggtggtgacgatgttgacg 58430
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>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0032N04, from chromosome 10, complete sequence
          Length = 159445

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 23     gcgcttcaacctcttcttc 41
              |||||||||||||||||||
Sbjct: 159317 gcgcttcaacctcttcttc 159299
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>emb|BX323992.9| Zebrafish DNA sequence from clone DKEY-185B14 in linkage group 12,
             complete sequence
          Length = 153572

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    ctggtcagacttgatgttc 65
             |||||||||||||||||||
Sbjct: 30081 ctggtcagacttgatgttc 30099
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 122     ggcggtggtgacgatggtg 140
               |||||||||||||||||||
Sbjct: 1593260 ggcggtggtgacgatggtg 1593242
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>gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0019N10, from chromosome 10, complete sequence
          Length = 192267

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    gcgcttcaacctcttcttc 41
             |||||||||||||||||||
Sbjct: 73063 gcgcttcaacctcttcttc 73081
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>gb|S57066.1| cydA=cytochrome d oxidase complex subunit I, cydB=cytochrome d
            oxidase complex subunit II [Azotobacter vinelandii,
            Genomic, 2966 nt]
          Length = 2966

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 107  ctcgttgtcggtcttggcg 125
            |||||||||||||||||||
Sbjct: 1922 ctcgttgtcggtcttggcg 1904
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>gb|AC149363.2| Phakopsora pachyrhizi clone JGIAFNA-53G11, complete sequence
          Length = 34849

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    cctcttcttcttgaactgg 50
             |||||||||||||||||||
Sbjct: 30211 cctcttcttcttgaactgg 30229
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 23       gcgcttcaacctcttcttc 41
                |||||||||||||||||||
Sbjct: 11841256 gcgcttcaacctcttcttc 11841238
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 111      ttgtcggtcttggcggtgg 129
                |||||||||||||||||||
Sbjct: 21834715 ttgtcggtcttggcggtgg 21834733
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>gb|AC012181.8| Homo sapiens chromosome 16 clone RP11-325K4, complete sequence
          Length = 189712

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 47    ctggtcagacttgatgttc 65
             |||||||||||||||||||
Sbjct: 86556 ctggtcagacttgatgttc 86538
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>gb|AC011298.7| Homo sapiens BAC clone RP11-118M12 from 2, complete sequence
          Length = 174221

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 125    ggtggtgacgatggtgacg 143
              |||||||||||||||||||
Sbjct: 104996 ggtggtgacgatggtgacg 105014
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>gb|AC112784.5| Homo sapiens BAC clone RP13-555N8 from 2, complete sequence
          Length = 196451

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 125    ggtggtgacgatggtgacg 143
              |||||||||||||||||||
Sbjct: 149943 ggtggtgacgatggtgacg 149961
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 122     ggcggtggtgacgatggtg 140
               |||||||||||||||||||
Sbjct: 4600981 ggcggtggtgacgatggtg 4600999
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>emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 in linkage group 12,
              complete sequence
          Length = 177468

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 47     ctggtcagacttgatgttc 65
              |||||||||||||||||||
Sbjct: 128252 ctggtcagacttgatgttc 128234
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>dbj|AK101051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033010E07, full
           insert sequence
          Length = 1766

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 111 ttgtcggtcttggcggtgg 129
           |||||||||||||||||||
Sbjct: 833 ttgtcggtcttggcggtgg 815
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>emb|BX901966.21| Zebrafish DNA sequence from clone DKEY-119B16 in linkage group 14,
              complete sequence
          Length = 145325

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 33     ctcttcttcttgaactggt 51
              |||||||||||||||||||
Sbjct: 125740 ctcttcttcttgaactggt 125722
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 23       gcgcttcaacctcttcttc 41
                |||||||||||||||||||
Sbjct: 11848596 gcgcttcaacctcttcttc 11848578
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>gb|M77787.1|AVICYDAB Azotobacter vinelandii cytochrome d subunit Ia (cydA) and cytochrome
            d subunit Ib (cydB) genes, complete cds
          Length = 3387

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 107  ctcgttgtcggtcttggcg 125
            |||||||||||||||||||
Sbjct: 2343 ctcgttgtcggtcttggcg 2325


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,294,281
Number of Sequences: 3902068
Number of extensions: 1294281
Number of successful extensions: 90540
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89258
Number of HSP's gapped (non-prelim): 1281
length of query: 173
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 151
effective length of database: 17,147,199,772
effective search space: 2589227165572
effective search space used: 2589227165572
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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