ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaet124e03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ003141.1|HVAJ3141 Hordeum vulgare mRNA for stress-related peroxidase Length = 1245 Score = 353 bits (178), Expect = 1e-94 Identities = 178/178 (100%) Strand = Plus / Minus Query: 2 aaaacacatagactacttaacggccactcacacagtcacacagtactactacgttacacc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1195 aaaacacatagactacttaacggccactcacacagtcacacagtactactacgttacacc 1136 Query: 62 gattggttatatatctctcacatgtcagcggcgatcccctcgtcgccggcgacggcggtc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1135 gattggttatatatctctcacatgtcagcggcgatcccctcgtcgccggcgacggcggtc 1076 Query: 122 tcgatgtcctggacacgcctgttggggacggcgcagttgttccggatctcgcccttgg 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1075 tcgatgtcctggacacgcctgttggggacggcgcagttgttccggatctcgcccttgg 1018
>emb|X62438.1|HVPERO H.vulgare mRNA for peroxidase Length = 740 Score = 321 bits (162), Expect = 4e-85 Identities = 176/178 (98%), Gaps = 2/178 (1%) Strand = Plus / Minus Query: 2 aaaacacatagactacttaacggccactcacacagtcacacagtactactacgttacacc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 aaaacacatagactacttaacggccactcacacagtcacacagtactactacgttacacc 538 Query: 62 gattggttatatatctctcacatgtcagcggcgatcccctcgtcgccggcgacggcggtc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 537 gattggttatatatctctcacatgtcagcggcgatcccctcgt-gccggcgacggcggtc 479 Query: 122 tcgatgtcctggacacgcctgttggggacggcgcagttgttccggatctcgcccttgg 179 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 tcgatgtcct-gacacgcctgttggggacggcgcagttgttccggatctcgcccttgg 422
>emb|AJ878510.1| Triticum aestivum mRNA for peroxidase precursor (prx gene), cultivar Cheyenne Length = 1226 Score = 155 bits (78), Expect = 6e-35 Identities = 96/102 (94%) Strand = Plus / Minus Query: 77 tctcacatgtcagcggcgatcccctcgtcgccggcgacggcggtctcgatgtcctggaca 136 ||||||||||| |||||||||||||||||||||| | |||||||||||| ||||||||| Sbjct: 1107 tctcacatgtcggcggcgatcccctcgtcgccggtggtggcggtctcgatatcctggaca 1048 Query: 137 cgcctgttggggacggcgcagttgttccggatctcgcccttg 178 |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1047 cgcctgttgggggcggcgcagttgttccggatctcgcccttg 1006
>gb|AY857763.1| Triticum monococcum peroxidase 9 (POX9) mRNA, partial cds Length = 760 Score = 83.8 bits (42), Expect = 2e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 115 ggcggtctcgatgtcctggacacgcctgttggggacggcgcagttgttccggatctcgcc 174 ||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||||||| Sbjct: 587 ggcggtctcgatgcccttgacacggctgttggggacggcgcagttgaaccggatctcgcc 528 Query: 175 ct 176 || Sbjct: 527 ct 526
>gb|AY857764.1| Triticum monococcum peroxidase 10 (POX10) mRNA, partial cds Length = 1308 Score = 60.0 bits (30), Expect = 2e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 115 ggcggtctcgatgtcctggacacgcctgttggggacggcgcagttgttccggatctcgcc 174 ||||||||||||| | | ||| ||||| ||||||||||||||||| | ||||||||| || Sbjct: 1023 ggcggtctcgatgacatcgacgcgcctattggggacggcgcagttctgccggatctcacc 964 Query: 175 ct 176 || Sbjct: 963 ct 962
>gb|AC100751.6| Mus musculus chromosome 18, clone RP23-249P18, complete sequence Length = 253910 Score = 44.1 bits (22), Expect = 0.15 Identities = 25/26 (96%) Strand = Plus / Plus Query: 26 cactcacacagtcacacagtactact 51 |||||| ||||||||||||||||||| Sbjct: 35412 cactcatacagtcacacagtactact 35437
>ref|XM_474444.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1041 Score = 42.1 bits (21), Expect = 0.57 Identities = 24/25 (96%) Strand = Plus / Minus Query: 150 cggcgcagttgttccggatctcgcc 174 ||||||||||||| ||||||||||| Sbjct: 970 cggcgcagttgttgcggatctcgcc 946
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 42.1 bits (21), Expect = 0.57 Identities = 24/25 (96%) Strand = Plus / Minus Query: 150 cggcgcagttgttccggatctcgcc 174 ||||||||||||| ||||||||||| Sbjct: 90573 cggcgcagttgttgcggatctcgcc 90549
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 0.57 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 cggcgcagttgttccggatctcgcc 174 ||||||||||||| ||||||||||| Sbjct: 35222888 cggcgcagttgttgcggatctcgcc 35222912 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 tcgtcgccggcgacggcgg 119 ||||||||||||||||||| Sbjct: 23556720 tcgtcgccggcgacggcgg 23556738
>dbj|AK104833.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-B05, full insert sequence Length = 1298 Score = 42.1 bits (21), Expect = 0.57 Identities = 24/25 (96%) Strand = Plus / Minus Query: 150 cggcgcagttgttccggatctcgcc 174 ||||||||||||| ||||||||||| Sbjct: 1026 cggcgcagttgttgcggatctcgcc 1002
>dbj|AK102307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090B01, full insert sequence Length = 1487 Score = 42.1 bits (21), Expect = 0.57 Identities = 24/25 (96%) Strand = Plus / Minus Query: 150 cggcgcagttgttccggatctcgcc 174 ||||||||||||| ||||||||||| Sbjct: 1177 cggcgcagttgttgcggatctcgcc 1153
>dbj|AK060789.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-D09, full insert sequence Length = 1349 Score = 42.1 bits (21), Expect = 0.57 Identities = 24/25 (96%) Strand = Plus / Minus Query: 150 cggcgcagttgttccggatctcgcc 174 ||||||||||||| ||||||||||| Sbjct: 1028 cggcgcagttgttgcggatctcgcc 1004
>tpe|BN000588.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx59 gene for class III peroxidase 59 precursor, exons 1-3 Length = 1290 Score = 42.1 bits (21), Expect = 0.57 Identities = 24/25 (96%) Strand = Plus / Minus Query: 150 cggcgcagttgttccggatctcgcc 174 ||||||||||||| ||||||||||| Sbjct: 1219 cggcgcagttgttgcggatctcgcc 1195
>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete sequence Length = 82895 Score = 42.1 bits (21), Expect = 0.57 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 cggcgcagttgttccggatctcgcc 174 ||||||||||||| ||||||||||| Sbjct: 66474 cggcgcagttgttgcggatctcgcc 66498
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 42.1 bits (21), Expect = 0.57 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 cggcgcagttgttccggatctcgcc 174 ||||||||||||| ||||||||||| Sbjct: 18733 cggcgcagttgttgcggatctcgcc 18757
>gb|AF019743.1|AF019743 Oryza sativa cationic peroxidase (OsCPX1) mRNA, complete cds Length = 1333 Score = 42.1 bits (21), Expect = 0.57 Identities = 24/25 (96%) Strand = Plus / Minus Query: 150 cggcgcagttgttccggatctcgcc 174 ||||||||||||| ||||||||||| Sbjct: 1015 cggcgcagttgttgcggatctcgcc 991
>ref|NM_183542.2| Oryza sativa (japonica cultivar-group), mRNA Length = 653 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tcgtcgccggcgacggcggt 120 |||||||||||||||||||| Sbjct: 440 tcgtcgccggcgacggcggt 459
>ref|XM_478764.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1472 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cgatcccctcgtcgccggcg 112 |||||||||||||||||||| Sbjct: 48 cgatcccctcgtcgccggcg 67
>gb|AY389595.1| Hyacinthus orientalis secretory peroxidase mRNA, partial cds Length = 578 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ttccggatctcgcccttgga 180 |||||||||||||||||||| Sbjct: 266 ttccggatctcgcccttgga 247
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 tcccctcgtcgccggcgacggcgg 119 ||||||||||||||||| |||||| Sbjct: 14162748 tcccctcgtcgccggcgccggcgg 14162771 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 25 ccactcacacagtcacaca 43 ||||||||||||||||||| Sbjct: 20254781 ccactcacacagtcacaca 20254763
>gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0012F18, from chromosome 3, complete sequence Length = 122903 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 tcccctcgtcgccggcgacggcgg 119 ||||||||||||||||| |||||| Sbjct: 37039 tcccctcgtcgccggcgccggcgg 37062
>gb|AC161263.2| Mus musculus BAC clone RP23-296K6 from chromosome 8, complete sequence Length = 199032 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gttatatatctctcacatgtcagc 90 ||||||||||| |||||||||||| Sbjct: 173426 gttatatatctatcacatgtcagc 173449
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cgatcccctcgtcgccggcg 112 |||||||||||||||||||| Sbjct: 22867465 cgatcccctcgtcgccggcg 22867484 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 tcgtcgccggcgacggcgg 119 ||||||||||||||||||| Sbjct: 24792063 tcgtcgccggcgacggcgg 24792081
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 tcccctcgtcgccggcgacggcgg 119 ||||||||||||||||| |||||| Sbjct: 14157723 tcccctcgtcgccggcgccggcgg 14157746 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 25 ccactcacacagtcacaca 43 ||||||||||||||||||| Sbjct: 20247810 ccactcacacagtcacaca 20247792
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tcgtcgccggcgacggcggt 120 |||||||||||||||||||| Sbjct: 631577 tcgtcgccggcgacggcggt 631596
>dbj|AP003219.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032H19 Length = 126434 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tcgtcgccggcgacggcggt 120 |||||||||||||||||||| Sbjct: 15321 tcgtcgccggcgacggcggt 15340
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tcgtcgccggcgacggcggt 120 |||||||||||||||||||| Sbjct: 106182 tcgtcgccggcgacggcggt 106201
>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1019_E02 Length = 121607 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cgatcccctcgtcgccggcg 112 |||||||||||||||||||| Sbjct: 60732 cgatcccctcgtcgccggcg 60751
>dbj|AK106380.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-D10, full insert sequence Length = 1471 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cgatcccctcgtcgccggcg 112 |||||||||||||||||||| Sbjct: 47 cgatcccctcgtcgccggcg 66
>dbj|AK103623.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133N12, full insert sequence Length = 654 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tcgtcgccggcgacggcggt 120 |||||||||||||||||||| Sbjct: 440 tcgtcgccggcgacggcggt 459
>gb|AC144858.3| Mus musculus BAC clone RP24-144F3 from 8, complete sequence Length = 185158 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gttatatatctctcacatgtcagc 90 ||||||||||| |||||||||||| Sbjct: 41286 gttatatatctatcacatgtcagc 41309
>gb|AC168091.3| Mus musculus BAC clone RP23-163F18 from chromosome 14, complete sequence Length = 227936 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 cactcacacagtcacacag 44 ||||||||||||||||||| Sbjct: 81128 cactcacacagtcacacag 81110
>gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence Length = 149493 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 cctcgtcgccggcgacggc 117 ||||||||||||||||||| Sbjct: 48945 cctcgtcgccggcgacggc 48927
>gb|DQ227748.1| Diacamma ceylonense scalloped (sd) mRNA, partial cds Length = 715 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 107 ccggcgacggcggtctcga 125 ||||||||||||||||||| Sbjct: 209 ccggcgacggcggtctcga 227
>ref|XM_464531.1| Oryza sativa (japonica cultivar-group), mRNA Length = 897 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 102 cgtcgccggcgacggcggtctcg 124 |||||||| |||||||||||||| Sbjct: 592 cgtcgccgacgacggcggtctcg 570
>ref|XM_472832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2280 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tcgtcgccggcgacggcgg 119 ||||||||||||||||||| Sbjct: 1078 tcgtcgccggcgacggcgg 1060
>gb|AF488414.1| Pennisetum glaucum BAC 311G2 complete sequence Length = 123096 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 105 cgccggcgacggcggtctc 123 ||||||||||||||||||| Sbjct: 99388 cgccggcgacggcggtctc 99370
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09, complete sequence Length = 155525 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 100 ctcgtcgccggcgacggcg 118 ||||||||||||||||||| Sbjct: 33725 ctcgtcgccggcgacggcg 33707
>gb|AC124981.25| Mus musculus chromosome 5, clone RP24-170P20, complete sequence Length = 153767 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 25 ccactcacacagtcacaca 43 ||||||||||||||||||| Sbjct: 40858 ccactcacacagtcacaca 40876
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 25 ccactcacacagtcacaca 43 ||||||||||||||||||| Sbjct: 53218 ccactcacacagtcacaca 53236
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 96 tcccctcgtcgccggcgacggcg 118 ||||||||||||||||| ||||| Sbjct: 101723 tcccctcgtcgccggcgccggcg 101745
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 120 tctcgatgtcctggacacg 138 ||||||||||||||||||| Sbjct: 4098551 tctcgatgtcctggacacg 4098533
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 100 ctcgtcgccggcgacggcg 118 ||||||||||||||||||| Sbjct: 611416 ctcgtcgccggcgacggcg 611434
>gb|AC141477.4| Mus musculus BAC clone RP23-386J14 from chromosome 10, complete sequence Length = 213720 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 28 ctcacacagtcacacagta 46 ||||||||||||||||||| Sbjct: 19062 ctcacacagtcacacagta 19044
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 cctcgtcgccggcgacggc 117 ||||||||||||||||||| Sbjct: 24107 cctcgtcgccggcgacggc 24089
>gb|AC121533.6| Mus musculus chromosome 9, clone RP24-555P22, complete sequence Length = 175009 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 25 ccactcacacagtcacaca 43 ||||||||||||||||||| Sbjct: 103284 ccactcacacagtcacaca 103302
>gb|AF319481.1| Oryza sativa calcium-dependent calmodulin-independent protein kinase (CK1) gene, complete cds Length = 4206 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 cctcgtcgccggcgacggc 117 ||||||||||||||||||| Sbjct: 1869 cctcgtcgccggcgacggc 1851
>gb|AF319480.1| Oryza sativa calcium-dependent calmodulin-independent protein kinase (CK1) mRNA, complete cds Length = 1959 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 cctcgtcgccggcgacggc 117 ||||||||||||||||||| Sbjct: 89 cctcgtcgccggcgacggc 71
>ref|XM_749336.1| Aspergillus fumigatus Af293 NAD-binding Rossmann fold oxidoreductase (Afu3g11930) partial mRNA Length = 1242 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 164 cggatctcgcccttggagc 182 ||||||||||||||||||| Sbjct: 908 cggatctcgcccttggagc 890
>gb|AC132684.3| Mus musculus BAC clone RP23-277L20 from 9, complete sequence Length = 182976 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 25 ccactcacacagtcacaca 43 ||||||||||||||||||| Sbjct: 90066 ccactcacacagtcacaca 90048
>emb|CR695714.2|CNS0FZRI Tetraodon nigroviridis full-length cDNA Length = 1542 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 161 ttccggatctcgcccttgg 179 ||||||||||||||||||| Sbjct: 429 ttccggatctcgcccttgg 411
>gb|AY390432.1| Foot-and-mouth disease virus Asia1 strain YNBS/58, complete genome Length = 8163 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 126 tgtcctggacacgcctgttgggg 148 |||||||| |||||||||||||| Sbjct: 236 tgtcctgggcacgcctgttgggg 258
>gb|AC006507.21| Mus musculus strain 129S6/SvEvTac clone rp21-580p20 map 10, complete sequence Length = 185664 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 ctcacacagtcacacagta 46 ||||||||||||||||||| Sbjct: 64997 ctcacacagtcacacagta 65015
>gb|AY364467.1| Triticum monococcum cytosolic glutathione reductase (grc1) mRNA, complete cds Length = 1806 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 97 cccctcgtcgccggcgacggcgg 119 ||||||||||||| ||||||||| Sbjct: 104 cccctcgtcgccgacgacggcgg 126
>gb|AC140851.12| Mus musculus strain C57BL/6J clone rp23-358m4, complete sequence Length = 214913 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 ctcacacagtcacacagta 46 ||||||||||||||||||| Sbjct: 52423 ctcacacagtcacacagta 52441
>gb|AY341851.1| Oryza sativa (japonica cultivar-group) WRKY10 mRNA, complete cds Length = 2531 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tcgtcgccggcgacggcgg 119 ||||||||||||||||||| Sbjct: 1105 tcgtcgccggcgacggcgg 1087
>gb|AY341843.1| Oryza sativa (japonica cultivar-group) WRKY2 mRNA, complete cds Length = 3152 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tcgtcgccggcgacggcgg 119 ||||||||||||||||||| Sbjct: 1815 tcgtcgccggcgacggcgg 1797
>emb|AL357498.16| Human DNA sequence from clone RP11-342H9 on chromosome 6, complete sequence Length = 101064 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 21 acggccactcacacagtcacaca 43 |||||||||||||||| |||||| Sbjct: 72671 acggccactcacacagacacaca 72649
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 120 tctcgatgtcctggacacg 138 ||||||||||||||||||| Sbjct: 289117 tctcgatgtcctggacacg 289099
>gb|AC154683.2| Mus musculus BAC clone RP23-142O4 from chromosome 14, complete sequence Length = 219067 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 cactcacacagtcacacag 44 ||||||||||||||||||| Sbjct: 190511 cactcacacagtcacacag 190493
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 120 tctcgatgtcctggacacg 138 ||||||||||||||||||| Sbjct: 292640 tctcgatgtcctggacacg 292622
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 164 cggatctcgcccttggagc 182 ||||||||||||||||||| Sbjct: 1862104 cggatctcgcccttggagc 1862122 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 98 ccctcgtcgccggcgacgg 116 ||||||||||||||||||| Sbjct: 659118 ccctcgtcgccggcgacgg 659136
>tpg|BK005038.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 35 (WRKY35) gene, complete cds Length = 3290 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tcgtcgccggcgacggcgg 119 ||||||||||||||||||| Sbjct: 1906 tcgtcgccggcgacggcgg 1888
>gb|AC099794.2| Homo sapiens chromosome 1 clone RP4-771M4, complete sequence Length = 134341 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 68 ttatatatctctcacatgtcagc 90 |||||||| |||||||||||||| Sbjct: 71891 ttatatatatctcacatgtcagc 71869
>dbj|AK030425.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330411C23 product:unclassifiable, full insert sequence Length = 3637 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 ggccactcacacagtcaca 41 ||||||||||||||||||| Sbjct: 2412 ggccactcacacagtcaca 2430
>gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A15 genomic sequence, complete sequence Length = 156929 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 25 ccactcacacagtcacaca 43 ||||||||||||||||||| Sbjct: 50088 ccactcacacagtcacaca 50070
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 154 gcagttgttccggatctcgccct 176 |||||| |||||||||||||||| Sbjct: 20926200 gcagttcttccggatctcgccct 20926222 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tcgtcgccggcgacggcgg 119 ||||||||||||||||||| Sbjct: 14500357 tcgtcgccggcgacggcgg 14500339 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 cctcgtcgccggcgacggc 117 ||||||||||||||||||| Sbjct: 1746023 cctcgtcgccggcgacggc 1746005 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 cctcgtcgccggcgacggc 117 ||||||||||||||||||| Sbjct: 1647367 cctcgtcgccggcgacggc 1647349
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 96 tcccctcgtcgccggcgacggcg 118 ||||||||||||||||| ||||| Sbjct: 2821916 tcccctcgtcgccggcgccggcg 2821938 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 cctcgtcgccggcgacggc 117 ||||||||||||||||||| Sbjct: 1806277 cctcgtcgccggcgacggc 1806259 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 cctcgtcgccggcgacggc 117 ||||||||||||||||||| Sbjct: 1693937 cctcgtcgccggcgacggc 1693919
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 ccctcgtcgccggcgacgg 116 ||||||||||||||||||| Sbjct: 17594522 ccctcgtcgccggcgacgg 17594504 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 cccctcgtcgccggcgacg 115 ||||||||||||||||||| Sbjct: 6613150 cccctcgtcgccggcgacg 6613168 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tcgtcgccggcgacggcgg 119 ||||||||||||||||||| Sbjct: 6317345 tcgtcgccggcgacggcgg 6317327
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 25 ccactcacacagtcacaca 43 ||||||||||||||||||| Sbjct: 28268976 ccactcacacagtcacaca 28268994 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 100 ctcgtcgccggcgacggcg 118 ||||||||||||||||||| Sbjct: 24519543 ctcgtcgccggcgacggcg 24519525
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 102 cgtcgccggcgacggcggtctcg 124 |||||||| |||||||||||||| Sbjct: 5748909 cgtcgccgacgacggcggtctcg 5748931
>gb|AC122744.16| Mus musculus chromosome 5, clone RP23-37I24, complete sequence Length = 175214 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 cactcacacagtcacacag 44 ||||||||||||||||||| Sbjct: 98220 cactcacacagtcacacag 98202
>gb|AC154807.2| Mus musculus BAC clone RP23-79E7 from chromosome 16, complete sequence Length = 256130 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 cactcacacagtcacacag 44 ||||||||||||||||||| Sbjct: 37035 cactcacacagtcacacag 37017
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 102 cgtcgccggcgacggcggtctcg 124 ||||||||||||||||| ||||| Sbjct: 1822896 cgtcgccggcgacggcgatctcg 1822874
>gb|AF291667.1|AF291667 Pinus sylvestris class III peroxidase PSYP1 mRNA, complete cds Length = 1294 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 154 gcagttgttccggatctcgccct 176 |||||||||||||||||| |||| Sbjct: 1073 gcagttgttccggatctctccct 1051
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 164 cggatctcgcccttggagc 182 ||||||||||||||||||| Sbjct: 3310808 cggatctcgcccttggagc 3310826
>dbj|AP003527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0564B04 Length = 64684 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 ccctcgtcgccggcgacgg 116 ||||||||||||||||||| Sbjct: 20870 ccctcgtcgccggcgacgg 20852
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0425F05 Length = 162858 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 cccctcgtcgccggcgacg 115 ||||||||||||||||||| Sbjct: 47276 cccctcgtcgccggcgacg 47294
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tcgtcgccggcgacggcgg 119 ||||||||||||||||||| Sbjct: 111421 tcgtcgccggcgacggcgg 111403
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0690H04 Length = 137319 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 cccctcgtcgccggcgacg 115 ||||||||||||||||||| Sbjct: 129526 cccctcgtcgccggcgacg 129544
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 tcgtcgccggcgacggcgg 119 ||||||||||||||||||| Sbjct: 26514 tcgtcgccggcgacggcgg 26532
>dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1135_F06 Length = 102230 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 102 cgtcgccggcgacggcggtctcg 124 |||||||| |||||||||||||| Sbjct: 38423 cgtcgccgacgacggcggtctcg 38445
>dbj|AK109421.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-E04, full insert sequence Length = 1402 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tcgtcgccggcgacggcgg 119 ||||||||||||||||||| Sbjct: 705 tcgtcgccggcgacggcgg 687
>dbj|AK120599.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149F09, full insert sequence Length = 1879 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 ccctcgtcgccggcgacgg 116 ||||||||||||||||||| Sbjct: 611 ccctcgtcgccggcgacgg 593
>dbj|AK109551.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-A03, full insert sequence Length = 1325 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 154 gcagttgttccggatctcgccct 176 |||||| |||||||||||||||| Sbjct: 1110 gcagttcttccggatctcgccct 1088
>dbj|AK105239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-B04, full insert sequence Length = 1369 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 tcgtcgccggcgacggcgg 119 ||||||||||||||||||| Sbjct: 536 tcgtcgccggcgacggcgg 554
>dbj|AK103578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132P14, full insert sequence Length = 2166 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 ccctcgtcgccggcgacgg 116 ||||||||||||||||||| Sbjct: 583 ccctcgtcgccggcgacgg 565
>dbj|AK073517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040I03, full insert sequence Length = 2636 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 cccctcgtcgccggcgacg 115 ||||||||||||||||||| Sbjct: 145 cccctcgtcgccggcgacg 127
>dbj|AK068449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153B14, full insert sequence Length = 3033 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tcgtcgccggcgacggcgg 119 ||||||||||||||||||| Sbjct: 2663 tcgtcgccggcgacggcgg 2645
>dbj|AK066970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089B21, full insert sequence Length = 2977 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 cccctcgtcgccggcgacg 115 ||||||||||||||||||| Sbjct: 97 cccctcgtcgccggcgacg 79
>dbj|AK061251.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-G01, full insert sequence Length = 1136 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tcgtcgccggcgacggcgg 119 ||||||||||||||||||| Sbjct: 708 tcgtcgccggcgacggcgg 690
>tpe|BN000667.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx138 gene for class III peroxidase 138 precursor, exons 1-4 Length = 9140 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 154 gcagttgttccggatctcgccct 176 |||||| |||||||||||||||| Sbjct: 9119 gcagttcttccggatctcgccct 9097
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 100 ctcgtcgccggcgacggcg 118 ||||||||||||||||||| Sbjct: 202760 ctcgtcgccggcgacggcg 202742
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 96 tcccctcgtcgccggcgacggcg 118 ||||||||||||||||| ||||| Sbjct: 2830947 tcccctcgtcgccggcgccggcg 2830969 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 cctcgtcgccggcgacggc 117 ||||||||||||||||||| Sbjct: 1803998 cctcgtcgccggcgacggc 1803980 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 cctcgtcgccggcgacggc 117 ||||||||||||||||||| Sbjct: 1691658 cctcgtcgccggcgacggc 1691640
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 154 gcagttgttccggatctcgccct 176 |||||| |||||||||||||||| Sbjct: 20852414 gcagttcttccggatctcgccct 20852436 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tcgtcgccggcgacggcgg 119 ||||||||||||||||||| Sbjct: 14454641 tcgtcgccggcgacggcgg 14454623 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 cctcgtcgccggcgacggc 117 ||||||||||||||||||| Sbjct: 1746000 cctcgtcgccggcgacggc 1745982 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 cctcgtcgccggcgacggc 117 ||||||||||||||||||| Sbjct: 1647347 cctcgtcgccggcgacggc 1647329
>gb|AC167333.3| Mus musculus BAC clone RP23-92L4 from chromosome 5, complete sequence Length = 236596 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 25 ccactcacacagtcacaca 43 ||||||||||||||||||| Sbjct: 178813 ccactcacacagtcacaca 178831
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 154 gcagttgttccggatctcgccct 176 |||||| |||||||||||||||| Sbjct: 11690 gcagttcttccggatctcgccct 11712
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 tcgtcgccggcgacggcgg 119 ||||||||||||||||||| Sbjct: 112623 tcgtcgccggcgacggcgg 112641
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 154 gcagttgttccggatctcgccct 176 |||||| |||||||||||||||| Sbjct: 32795 gcagttcttccggatctcgccct 32773
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 cctcgtcgccggcgacggc 117 ||||||||||||||||||| Sbjct: 94460 cctcgtcgccggcgacggc 94478
>emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112_B07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118101 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 tcgtcgccggcgacggcgg 119 ||||||||||||||||||| Sbjct: 16935 tcgtcgccggcgacggcgg 16953
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 cctcgtcgccggcgacggc 117 ||||||||||||||||||| Sbjct: 20898 cctcgtcgccggcgacggc 20916
>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 91883 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 cctcgtcgccggcgacggc 117 ||||||||||||||||||| Sbjct: 45557 cctcgtcgccggcgacggc 45575
>emb|AL596331.15| Mouse DNA sequence from clone RP23-81G14 on chromosome 11, complete sequence Length = 228391 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 ggccactcacacagtcaca 41 ||||||||||||||||||| Sbjct: 204053 ggccactcacacagtcaca 204035
>emb|AL672228.14| Mouse DNA sequence from clone RP24-133C15 on chromosome 11, complete sequence Length = 162556 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 actcacacagtcacacagt 45 ||||||||||||||||||| Sbjct: 83809 actcacacagtcacacagt 83827 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,083,791 Number of Sequences: 3902068 Number of extensions: 1083791 Number of successful extensions: 94389 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 114 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91095 Number of HSP's gapped (non-prelim): 3292 length of query: 182 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 160 effective length of database: 17,147,199,772 effective search space: 2743551963520 effective search space used: 2743551963520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
