ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet124d01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KPC1_CANAL (P43057) Protein kinase C-like 1 (EC 2.7.11.13) (PKC 1) 28 4.4

>KPC1_CANAL (P43057) Protein kinase C-like 1 (EC 2.7.11.13) (PKC 1)|
          Length = 1097

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
 Frame = -3

Query: 230 YNIMYCIL------YTIHDVLRCRYLDHKLVKQEMCHICMSQRAS 114
           YNIM C L      YT +    C++L HK   Q++   C+S+  S
Sbjct: 424 YNIMSCALCGEFLRYTGYQCQDCKFLCHKKCYQKVVTKCISKSGS 468


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,899,602
Number of Sequences: 219361
Number of extensions: 850469
Number of successful extensions: 1527
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1527
length of database: 80,573,946
effective HSP length: 82
effective length of database: 62,586,344
effective search space used: 1502072256
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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