>ZN484_HUMAN (Q5JVG2) Zinc finger protein 484|
          Length = 852

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 96  SSNNNIHAKLQTFGLHRGCLHCSSPFLPQPFMS 194
           +SN NIH K+ T G H  C  C   F  +  +S
Sbjct: 368 NSNLNIHKKIHTGGKHFECTECGKAFTRKSTLS 400

>LEU2_YERPS (Q66EM3) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 476

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/64 (26%), Positives = 30/64 (46%)
 Frame = -2

Query: 347 ETTKQDEDGQVRVDRNKQSGVTASAFELFIQLVGQTMSVNRYIHRRSMMNA*HEGLGKEG 168
           +T KQ     +R++ N   G   +A ++ + ++G+T S     H      +  E L  EG
Sbjct: 162 QTLKQGRAKTMRIEVNGTVGAGITAKDIVLAIIGKTGSAGGTGHVVEFCGSAIEALSMEG 221

Query: 167 RRTM 156
           R T+
Sbjct: 222 RMTL 225

>LEU2_YERPE (Q8ZIH0) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 476

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/64 (26%), Positives = 30/64 (46%)
 Frame = -2

Query: 347 ETTKQDEDGQVRVDRNKQSGVTASAFELFIQLVGQTMSVNRYIHRRSMMNA*HEGLGKEG 168
           +T KQ     +R++ N   G   +A ++ + ++G+T S     H      +  E L  EG
Sbjct: 162 QTLKQGRAKTMRIEVNGTVGAGITAKDIVLAIIGKTGSAGGTGHVVEFCGSAIEALSMEG 221

Query: 167 RRTM 156
           R T+
Sbjct: 222 RMTL 225

>DAPA_LISIN (Q92BS0) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)|
          Length = 293

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 46  PNS-GIYIHVVMSSNAHVLAIIIYMQSCKHSVSIEVASIVLLPSFPS 183
           PN  G+Y H V  + A  L ++IY    +  V+IE  +I+ L   P+
Sbjct: 113 PNQDGLYAHFVAVAEASDLPVVIYNIPGRSVVNIEPETIIRLAKLPN 159

>DAPA_LISMF (Q71ZN5) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)|
          Length = 293

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 46  PNS-GIYIHVVMSSNAHVLAIIIYMQSCKHSVSIEVASIVLLPSFPS 183
           PN  G+Y H    S A  L ++IY    +  V+IE  +I+ L   P+
Sbjct: 113 PNQDGLYAHFAAVSEASDLPVVIYNIPGRSVVNIEPETIIRLAKLPN 159

>PSY_MAIZE (P49085) Phytoene synthase, chloroplast precursor (EC 2.5.1.-)|
          Length = 410

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = -3

Query: 397 GKSLLLPYSLRNNQT 353
           GKSLLLP SLRN QT
Sbjct: 396 GKSLLLPCSLRNGQT 410

>YD543_YEAST (Q03051) Hypothetical UPF0320 protein YDR543C|
          Length = 99

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 285 HGICLRALHPVSWTNNVRESVH 220
           HG CL  L+PV +T+N  +  H
Sbjct: 17  HGTCLSGLYPVPFTHNAHDYPH 38

>RDGC_PSEPK (Q88M72) Recombination-associated protein rdgC|
          Length = 306

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 164 RTMEATSMETECLQLCMYIIIARTCAFEDITTCIYIPEFGK 42
           R  +    E E L+  +    AR CA +++TT  ++  FGK
Sbjct: 10  RLTQEVPFEPEALEAALASKPARPCASQELTTYGFVAPFGK 50

>UVRC_PSEU2 (Q52377) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 607

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
 Frame = -1

Query: 300 QTERCHGICLRALHPVSWTNNVRESV-----HSSAINDE 199
           Q +RC G C+  + P  +  +VR SV      S+A++DE
Sbjct: 170 QIKRCKGPCVGLVEPEVYAEDVRHSVMFLEGRSNALSDE 208

>UVRC_PSESM (Q880X7) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 607

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
 Frame = -1

Query: 300 QTERCHGICLRALHPVSWTNNVRESV-----HSSAINDE 199
           Q +RC G C+  + P  +  +VR SV      S+A++DE
Sbjct: 170 QIKRCKGPCVGLVEPEVYAEDVRHSVMFLEGRSNALSDE 208

>UVRC_PSE14 (Q48J96) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 607

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
 Frame = -1

Query: 300 QTERCHGICLRALHPVSWTNNVRESV-----HSSAINDE 199
           Q +RC G C+  + P  +  +VR SV      S+A++DE
Sbjct: 170 QIKRCKGPCVGLVEPEVYAEDVRHSVMFLEGRSNALSDE 208


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,262,630
Number of Sequences: 219361
Number of extensions: 1043662
Number of successful extensions: 2288
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2288
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)