| Clone Name | rbaet123h06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | gb|AY149607.1| Hordeum vulgare cultivar Orthega cinnamoyl CoA re... | 317 | 8e-84 | 2 | gb|AC129572.6| Mus musculus chromosome 5, clone RP23-452L7, comp... | 40 | 2.7 | 3 | gb|AC113018.7| Mus musculus chromosome 5, clone RP23-183C18, com... | 40 | 2.7 |
|---|
>gb|AY149607.1| Hordeum vulgare cultivar Orthega cinnamoyl CoA reductase mRNA, complete cds Length = 1279 Score = 317 bits (160), Expect = 8e-84 Identities = 166/168 (98%) Strand = Plus / Minus Query: 43 gcgttgaccatcgaagacgatacattactatgttggcttatagtccacttaaataacata 102 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1279 gcgttgaccatcgaagacgatacattactatgtttgcttatagtccacttaaataacata 1220 Query: 103 acacgatattagataggacgtatacacaaacataacagatcatgttacagaaaaaacgtg 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1219 acacgatattagataggacgtatacacaaacataacagatcatgttacagaaaaaacgtg 1160 Query: 163 aactgtgctgtttcttcagcaccatcacgctgttgcaccgtccagctg 210 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1159 tactgtgctgtttcttcagcaccatcacgctgttgcaccgtccagctg 1112
>gb|AC129572.6| Mus musculus chromosome 5, clone RP23-452L7, complete sequence Length = 178011 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 tgttggcttatagtccacttaaat 96 ||||||||||| |||||||||||| Sbjct: 26301 tgttggcttattgtccacttaaat 26324
>gb|AC113018.7| Mus musculus chromosome 5, clone RP23-183C18, complete sequence Length = 215671 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 tgttggcttatagtccacttaaat 96 ||||||||||| |||||||||||| Sbjct: 3403 tgttggcttattgtccacttaaat 3380 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,986,948 Number of Sequences: 3902068 Number of extensions: 1986948 Number of successful extensions: 143812 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 143808 Number of HSP's gapped (non-prelim): 4 length of query: 212 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 190 effective length of database: 17,147,199,772 effective search space: 3257967956680 effective search space used: 3257967956680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)