>gb|AC113052.10| Mus musculus chromosome 5, clone RP23-250D22, complete sequence
          Length = 193698

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 92     atttacaaaaccaaacatgttg 113
              ||||||||||||||||||||||
Sbjct: 143181 atttacaaaaccaaacatgttg 143160

>gb|AC108829.13| Mus musculus chromosome 3, clone RP23-159D18, complete sequence
          Length = 184470

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 92     atttacaaaaccaaacatgtt 112
              |||||||||||||||||||||
Sbjct: 139292 atttacaaaaccaaacatgtt 139272

>gb|AC169083.1| Mus musculus chromosome 3, clone RP23-28D7, complete sequence
          Length = 215143

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 92    atttacaaaaccaaacatgtt 112
             |||||||||||||||||||||
Sbjct: 42327 atttacaaaaccaaacatgtt 42347

>gb|L35587.1|ZEFHSP90B Danio rerio heat shock protein 90 (hsp90) mRNA, partial cds
          Length = 305

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 237 cgttggacacgagctccctgaggaa 261
           ||||||| |||||||||||||||||
Sbjct: 43  cgttggaaacgagctccctgaggaa 19

>ref|NM_131310.1| Danio rerio heat shock protein 90kDa alpha (cytosolic), class B
           member 1 (hsp90ab1), mRNA
          Length = 2642

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 237 cgttggacacgagctccctgaggaa 261
           ||||||| |||||||||||||||||
Sbjct: 183 cgttggaaacgagctccctgaggaa 159

>gb|BC090756.1| Danio rerio cDNA clone IMAGE:7137807
          Length = 1625

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 237 cgttggacacgagctccctgaggaa 261
           ||||||| |||||||||||||||||
Sbjct: 952 cgttggaaacgagctccctgaggaa 928

>gb|AC119234.10| Mus musculus chromosome 19, clone RP24-211P24, complete sequence
          Length = 143832

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 214    ctccttccccttccttcccgt 234
              |||||||||||||||||||||
Sbjct: 130805 ctccttccccttccttcccgt 130785

>gb|AF042108.1|AF042108 Danio rerio heat shock protein 90-beta (hsp90beta) mRNA, complete
           cds
          Length = 2642

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 237 cgttggacacgagctccctgaggaa 261
           ||||||| |||||||||||||||||
Sbjct: 183 cgttggaaacgagctccctgaggaa 159

>gb|AC139326.5| Mus musculus BAC clone RP24-341F20 from chromosome 3, complete sequence
          Length = 141290

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 92    atttacaaaaccaaacatgtt 112
             |||||||||||||||||||||
Sbjct: 94760 atttacaaaaccaaacatgtt 94780

>ref|NM_120948.3| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/
            nucleic acid binding AT5G08610 mRNA, complete cds
          Length = 2755

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 213  actccttccccttccttccc 232
            ||||||||||||||||||||
Sbjct: 2268 actccttccccttccttccc 2249

>gb|BC064176.1| Xenopus tropicalis RIKEN cDNA 1810034M08 gene, mRNA (cDNA clone
           MGC:75657 IMAGE:5379754), complete cds
          Length = 1222

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 91  gatttacaaaaccaaacatgttgctgca 118
           |||||||||||||||| || ||||||||
Sbjct: 993 gatttacaaaaccaaaaatattgctgca 966

>gb|BC065180.1| Homo sapiens hypothetical protein LOC144501, mRNA (cDNA clone
            MGC:71341 IMAGE:6573884), complete cds
          Length = 3910

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  tctcactccttccccttcct 228
            ||||||||||||||||||||
Sbjct: 2591 tctcactccttccccttcct 2610

>emb|CT025420.2| Xenopus tropicalis finished cDNA, clone TGas047m13
          Length = 1240

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 91   gatttacaaaaccaaacatgttgctgca 118
            |||||||||||||||| || ||||||||
Sbjct: 1038 gatttacaaaaccaaaaatattgctgca 1011

>gb|BC047308.1| Homo sapiens hypothetical protein LOC144501, mRNA (cDNA clone
            IMAGE:5104138), with apparent retained intron
          Length = 3585

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  tctcactccttccccttcct 228
            ||||||||||||||||||||
Sbjct: 2267 tctcactccttccccttcct 2286

>gb|BC033114.1| Homo sapiens hypothetical protein LOC144501, mRNA (cDNA clone
            IMAGE:5445923), with apparent retained intron
          Length = 3910

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  tctcactccttccccttcct 228
            ||||||||||||||||||||
Sbjct: 2591 tctcactccttccccttcct 2610

>gb|AC008083.23| Homo sapiens 12 BAC RP11-493L12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 192046

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 122    ccacccattttcagagtttcaggcaatg 149
              ||||||||||||||||| ||||| ||||
Sbjct: 151273 ccacccattttcagagtgtcaggaaatg 151300

>emb|BX537567.1|HSM806188 Homo sapiens mRNA; cDNA DKFZp686J1375 (from clone DKFZp686J1375);
            complete cds
          Length = 3411

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  tctcactccttccccttcct 228
            ||||||||||||||||||||
Sbjct: 2614 tctcactccttccccttcct 2633

>ref|NM_203994.1| Xenopus tropicalis RIKEN cDNA 1810034M08 gene (1810034m08rik), mRNA
          Length = 1222

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 91  gatttacaaaaccaaacatgttgctgca 118
           |||||||||||||||| || ||||||||
Sbjct: 993 gatttacaaaaccaaaaatattgctgca 966

>gb|AF227508.1| Rattus norvegicus intestinal alkaline phosphatase-II (IAP-II) gene,
            complete cds
          Length = 6359

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 205  ccaatctcactccttccccttccttccc 232
            |||| |||||||||||||||||| ||||
Sbjct: 2631 ccaacctcactccttccccttccctccc 2604

>emb|BX832919.1|CNS09Z0J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL22ZC12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 557

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 213 actccttccccttccttccc 232
           ||||||||||||||||||||
Sbjct: 65  actccttccccttccttccc 46

>gb|AC012513.12| Homo sapiens BAC clone RP11-566E18 from 2, complete sequence
          Length = 164935

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   gtttcaggcaatggcacagc 156
             ||||||||||||||||||||
Sbjct: 19304 gtttcaggcaatggcacagc 19285

>ref|NM_182507.1| Homo sapiens hypothetical protein LOC144501 (LOC144501), mRNA
          Length = 3411

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  tctcactccttccccttcct 228
            ||||||||||||||||||||
Sbjct: 2614 tctcactccttccccttcct 2633

>gb|AC021066.37| Homo sapiens 12 BAC RP11-845M18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 158285

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 209    tctcactccttccccttcct 228
              ||||||||||||||||||||
Sbjct: 111903 tctcactccttccccttcct 111922

>dbj|AB006697.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAH20
          Length = 80970

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   actccttccccttccttccc 232
             ||||||||||||||||||||
Sbjct: 61033 actccttccccttccttccc 61014

>gb|AC008123.9|AC008123 Homo sapiens 2q35 BAC RPCI11-1064L18 (Roswell Park Cancer Institute
            Human BAC Library) complete sequence
          Length = 168601

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 137  gtttcaggcaatggcacagc 156
            ||||||||||||||||||||
Sbjct: 8714 gtttcaggcaatggcacagc 8695

>gb|AC004242.1|AC004242 Homo sapiens 12q13 PAC RPCI1-316M24 (Roswell Park Cancer Institute
            Human PAC library) complete sequence
          Length = 104913

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 122  ccacccattttcagagtttcaggcaatg 149
            ||||||||||||||||| ||||| ||||
Sbjct: 2030 ccacccattttcagagtgtcaggaaatg 2003

>emb|AL162069.1|HSM802600 Homo sapiens mRNA; cDNA DKFZp762H106 (from clone DKFZp762H106)
          Length = 2140

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 tctcactccttccccttcct 228
           ||||||||||||||||||||
Sbjct: 821 tctcactccttccccttcct 840


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,893,301
Number of Sequences: 3902068
Number of extensions: 2893301
Number of successful extensions: 61169
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61126
Number of HSP's gapped (non-prelim): 43
length of query: 270
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 248
effective length of database: 17,147,199,772
effective search space: 4252505543456
effective search space used: 4252505543456
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)