>PHF10_MOUSE (Q9D8M7) PHD finger protein 10|
          Length = 410

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = +2

Query: 263 GGQRKRSNKNCMSSSVNHYRLGRSPPSSPAQT*H 364
           GG  KR NK    SS  +   G SPP S   T H
Sbjct: 220 GGDEKRKNKGTSDSSSGNVSEGDSPPDSQEDTFH 253

>YWBM_BACSU (P39596) Hypothetical protein ywbM|
          Length = 385

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 149 VSAVSGTTGLVQSGDIKASSTFYCGAR 229
           V A    TG V+SGDI+ S T Y  AR
Sbjct: 166 VKATEAFTGAVKSGDIEKSKTLYAKAR 192

>STFR_ECOLI (P76072) Side tail fiber protein homolog from lambdoid prophage Rac|
          Length = 1120

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +2

Query: 146 PVSAVSGTTGLVQSGDIKASSTFYCGARRC--LDAPRHNRIGGQRKRSNKN 292
           P +A SG   + +SGD      FY G   C  L    H R GG   RS+++
Sbjct: 832 PWNAESGAYNVTRSGDSYILVNFYTGVGSCRTLQMKAHYRNGGLFYRSSRD 882

>ACVS_STRCL (Q01757) N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine|
           synthase (EC 6.3.2.26)
           (Delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine
           synthetase) (ACV synthetase) (ACVS) (Fragment)
          Length = 805

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 179 VQSGDIKASSTFYCGARRCLDAPRHNRIGG 268
           V+ G+I+A +T Y G R+C+   R    GG
Sbjct: 688 VEPGEIEAQATEYAGVRKCVVIAREGAGGG 717

>UL76_HCMVA (P16725) Protein UL76|
          Length = 325

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 126 FVPEITKGNRRFYLGIILCRSAPSCVL 46
           F PE+ K  RR ++ + L R  P CVL
Sbjct: 56  FPPELQKYRRRLFIEVRLSRRIPDCVL 82

>HGP4_HAEIN (Q57408) Probable hemoglobin and hemoglobin-haptoglobin-binding|
           protein 4 precursor
          Length = 999

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 2   EVQQRNGKPAPAPVCRTQEGADRHNIMPR*NLRFPFVISGTN 127
           +V  RNG P    +   ++G  RH ++ + N  F  V SGTN
Sbjct: 392 KVVDRNGDPVELKLVEDEQGQKRHQVVDKYNNPFS-VASGTN 432

>BRSK2_HUMAN (Q8IWQ3) BR serine/threonine-protein kinase 2 (EC 2.7.11.1)|
           (Serine/threonine-protein kinase 29) (SAD1B)
          Length = 736

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 20/49 (40%), Positives = 23/49 (46%)
 Frame = +2

Query: 224 ARRCLDAPRHNRIGGQRKRSNKNCMSSSVNHYRLGRSPPSSPAQT*HPS 370
           ARR ++  +H    GQR RS     S       L  SP SSP  T HPS
Sbjct: 397 ARRAIEMAQH----GQRSRSISGASSG------LSTSPLSSPRVTPHPS 435

>NPC1_CAEEL (Q19127) Niemann-Pick C1 protein homolog 1 precursor|
          Length = 1383

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
 Frame = -3

Query: 296  CNF--CSTASVAPQSGYAVGHRGIVVLHNKMYYWL 198
            C F  CS  S      YAVGH     L  +MY W+
Sbjct: 929  CTFPGCSDTSFGNIMNYAVGHTEQTYLSGEMYNWI 963

>MYODA_XENLA (P13904) Myoblast determination protein 1 homolog A (Myogenic|
           factor 1)
          Length = 289

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
 Frame = +2

Query: 218 CGARR--------CLDAPRHNRIGGQRKRSNKNCMSSSVNHYRLGRSPPSSPAQT 358
           CG+RR          D+P  +R+G     S+ +C+SS V   R+    PS P  T
Sbjct: 189 CGSRRRNSYDSSFYSDSPNDSRLGKSSVISSLDCLSSIVE--RISTQSPSCPVPT 241

>RT09_CAEEL (P34388) Probable 40S ribosomal protein S9, mitochondrial precursor|
          Length = 392

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -2

Query: 165 PETADTGAYVFVAFVPEI---TKGNRRFYLGIILCRSAPSCVLHTGAGAG 25
           P TA TG+ +F   +PE+      NRR+      C+   + V  T AG G
Sbjct: 223 PMTASTGSKLFGPAIPEVHVCAVTNRRYAEVTTRCKDTRATVKVTDAGKG 272

>CV013_MOUSE (Q8BZI6) Protein C22orf13 homolog|
          Length = 239

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 172 CSARNSGHRCLCVCSIRTRDHEGKPKILSGH 80
           C    SGHRC C    RT D++G   +L G+
Sbjct: 167 CCFTPSGHRCFC----RTPDYQGHFIVLRGY 193

>ILVD_SYNPX (Q7U763) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)|
          Length = 557

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 143 APVSAVSGTTGLVQSGD 193
           AP +AV GT GLVQ GD
Sbjct: 482 APEAAVGGTIGLVQGGD 498

>NOTC1_RAT (Q07008) Neurogenic locus notch homolog protein 1 precursor (Notch|
           1) [Contains: Notch 1 extracellular truncation; Notch 1
           intracellular domain]
          Length = 2531

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
 Frame = -1

Query: 175 TCSARNSGHRCLCV-------CSIRTRDHEGKPKILSGHYIVPISPFLCSTYRGGCG 26
           TC  +    +C+C+       C I T +    P + +G  +  I+ FLC   +G  G
Sbjct: 466 TCLDQIGEFQCICMPGYEGVYCEINTDECASSPCLHNGRCVDKINEFLCQCPKGFSG 522


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,306,895
Number of Sequences: 219361
Number of extensions: 1289244
Number of successful extensions: 3268
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3266
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)