>CRD1_HORVU (Q5EFU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase) (Protein Xantha-l)
          Length = 417

 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = -2

Query: 337 PLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 233
           PLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY
Sbjct: 383 PLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 417

>CRD1_EUPES (Q945B7) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase)
          Length = 405

 Score = 68.2 bits (165), Expect = 5e-12
 Identities = 33/35 (94%), Positives = 34/35 (97%)
 Frame = -2

Query: 337 PLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 233
           PLIA LVSEI+AAYLMPPIESGSVDFAEFEPKLVY
Sbjct: 371 PLIAALVSEILAAYLMPPIESGSVDFAEFEPKLVY 405

>CRD1_GOSHI (Q6SJV8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase)
          Length = 405

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = -2

Query: 337 PLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 233
           PLIA L SE++A YLMPPIESGSVDFAEFEP+LVY
Sbjct: 371 PLIAALASELLATYLMPPIESGSVDFAEFEPQLVY 405

>CRD1_ARATH (Q9M591) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase) (Copper response defect 1 protein)
           (Dicarboxylate diiron protein) (AtZIP
          Length = 409

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = -2

Query: 337 PLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 233
           PL+  L SEI+AAYLMPP+ESGSVDFAEFEP LVY
Sbjct: 375 PLVTSLASEILAAYLMPPVESGSVDFAEFEPNLVY 409

>CTH1_CHLRE (Q9AR22) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase 2, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           2) (Copper target homolog 1 protein)
          Length = 407

 Score = 31.6 bits (70), Expect = 0.51
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -2

Query: 337 PLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 233
           P++ ++V+E+   ++M P ESGS D    +  LVY
Sbjct: 373 PILERMVAEVFQVFIMTPKESGSYDLDANKTALVY 407

>LTBP3_MOUSE (Q61810) Latent transforming growth factor beta-binding protein 3|
           precursor (LTBP-3)
          Length = 1268

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 227 LSKKDSSLPIFTNIMMHHAPRESLNEHRVHG*LT*STSSCAHL 99
           +S +  + P   N+ +HH P  S+  HR+ G      +S  HL
Sbjct: 214 ISAEVQAPPPVVNVRVHHPPEASVQVHRIEGPNAEGPASSQHL 256

>GRIPE_HUMAN (Q6GYQ0) GTPase-activating Rap/Ran-GAP domain-like 1|
           (GAP-related-interacting partner to E12) (GRIPE)
           (Tuberin-like protein 1)
          Length = 2036

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 190 FVKIGRDESFFDKFSRQAWAQIRQNQRSQTRLGA*GTQR 306
           F K+  D+SF   +SR    Q    QRS T  G+ GT++
Sbjct: 707 FQKVSVDKSFSRGWSRDQPGQAPMRQRSATTTGSPGTEK 745

>GRIPE_MOUSE (Q6GYP7) GTPase-activating RapGAP domain-like 1|
           (GAP-related-interacting partner to E12) (GRIPE)
           (Tuberin-like protein 1)
          Length = 2035

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 190 FVKIGRDESFFDKFSRQAWAQIRQNQRSQTRLGA*GTQR 306
           F K+  D+SF   +SR    Q    QRS T  G+ GT++
Sbjct: 706 FQKVSVDKSFSRGWSRDQPGQAPMRQRSATTTGSPGTEK 744


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,360,483
Number of Sequences: 219361
Number of extensions: 806333
Number of successful extensions: 1462
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1462
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)