| Clone Name | rbaet122g05 |
|---|---|
| Clone Library Name | barley_pub |
>S17P_WHEAT (P46285) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor| (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) Length = 393 Score = 62.0 bits (149), Expect(2) = 1e-10 Identities = 30/32 (93%), Positives = 32/32 (100%) Frame = -1 Query: 331 NDGKQSVLDKVITVLDERTQVAYGSKNEIIRF 236 +DGKQSVLDKVI+VLDERTQVAYGSKNEIIRF Sbjct: 342 SDGKQSVLDKVISVLDERTQVAYGSKNEIIRF 373 Score = 21.6 bits (44), Expect(2) = 1e-10 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = -3 Query: 233 ETLYGSSRL 207 ETLYGSSRL Sbjct: 375 ETLYGSSRL 383
>S17P_ARATH (P46283) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor| (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) Length = 393 Score = 52.0 bits (123), Expect = 4e-07 Identities = 25/32 (78%), Positives = 28/32 (87%) Frame = -1 Query: 331 NDGKQSVLDKVITVLDERTQVAYGSKNEIIRF 236 +DG +SVLDK I LD+RTQVAYGSKNEIIRF Sbjct: 343 SDGHKSVLDKTIINLDDRTQVAYGSKNEIIRF 374
>S17P_SPIOL (O20252) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor| (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) Length = 387 Score = 43.5 bits (101), Expect = 1e-04 Identities = 21/32 (65%), Positives = 26/32 (81%) Frame = -1 Query: 331 NDGKQSVLDKVITVLDERTQVAYGSKNEIIRF 236 ++G +SVLD + LD+RTQVAYGS NEIIRF Sbjct: 336 SEGTKSVLDIEVKNLDDRTQVAYGSLNEIIRF 367
>S17P_CHLRE (P46284) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor| (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) Length = 389 Score = 33.5 bits (75), Expect = 0.14 Identities = 18/32 (56%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = -1 Query: 328 DGKQ-SVLDKVITVLDERTQVAYGSKNEIIRF 236 DGK S LD I V D+RTQ+ YGS E+ RF Sbjct: 341 DGKAVSALDIPILVCDQRTQICYGSIGEVRRF 372
>F16P_XANFL (P23014) Fructose-1,6-bisphosphatase (EC 3.1.3.11)| (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) Length = 364 Score = 28.5 bits (62), Expect = 4.4 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -1 Query: 328 DGKQSVLDKVITVLDERTQVAYGSKNEIIRFGR 230 DG+ ++LD T L +R +GS++E+ R R Sbjct: 310 DGRGAILDLSATGLHQRVPFIFGSRDEVARVSR 342
>RKHD1_HUMAN (Q86XN8) RING finger and KH domain-containing protein 1| Length = 485 Score = 28.5 bits (62), Expect = 4.4 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -3 Query: 326 RQAVGAGQGDHRPRRADPGGLRLQ 255 R++ GAG H P +PGGLRL+ Sbjct: 337 RRSSGAGTPRHSPTLPEPGGLRLE 360
>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein| PUB1 (ARS consensus-binding protein ACBP-60) (Poly(U)-binding protein) (Poly uridylate-binding protein) Length = 452 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +1 Query: 37 SARPLYYQFASSQDNNNNNSMLQ 105 + RPL +A+ +DNNNNN+ Q Sbjct: 228 NGRPLRINWAAKRDNNNNNNYQQ 250
>QUEA_XYLFA (Q9PDR5) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 347 Score = 27.7 bits (60), Expect = 7.5 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 3/67 (4%) Frame = +2 Query: 107 LYNGQLVLTFRLKGKKKEGG---VIIXXXXXXXXXXXXXXXXKGSPEADDLVLGAVGHLG 277 ++N V+ RL G+K GG ++I + + ++L A GH G Sbjct: 58 VFNDTRVIPARLFGRKVSGGRVEILIERFLGTHQAVVQLRTSRSLKVGNRILLDAGGHAG 117 Query: 278 PLVEDGD 298 L DGD Sbjct: 118 VLGRDGD 124
>F16P1_HUMAN (P09467) Fructose-1,6-bisphosphatase 1 (EC 3.1.3.11)| (D-fructose-1,6-bisphosphate 1-phosphohydrolase 1) (FBPase 1) Length = 337 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = -1 Query: 325 GKQSVLDKVITVLDERTQVAYGSKNEIIRF 236 GK++VLD + T + +R V GS ++++ F Sbjct: 298 GKEAVLDVIPTDIHQRAPVILGSPDDVLEF 327
>ANLN_XENLA (Q801E2) Actin-binding protein anillin| Length = 1116 Score = 27.3 bits (59), Expect = 9.8 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +1 Query: 31 RPSARPLYYQFASSQDNNNNNSMLQT 108 RP++R YQ AS+++ NNN+ +QT Sbjct: 330 RPASRIYSYQSASARNELNNNTPVQT 355 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,097,919 Number of Sequences: 219361 Number of extensions: 433168 Number of successful extensions: 1226 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1192 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1222 length of database: 80,573,946 effective HSP length: 85 effective length of database: 61,928,261 effective search space used: 1486278264 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)