| Clone Name | rbaet122c09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ARCD_LACSK (O53092) Arginine/ornithine antiporter | 28 | 8.3 | 2 | VTDB_RABIT (P53789) Vitamin D-binding protein precursor (DBP) (G... | 28 | 8.3 |
|---|
>ARCD_LACSK (O53092) Arginine/ornithine antiporter| Length = 475 Score = 28.1 bits (61), Expect = 8.3 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -1 Query: 403 LWLCFSMWIPPVAFQGESRQVDGRKH 326 L LCF +IP + F G +R+ +G +H Sbjct: 419 LLLCFIAYIPGIYFYGRARKNNGHQH 444
>VTDB_RABIT (P53789) Vitamin D-binding protein precursor (DBP) (Group-specific| component) (Gc-globulin) (VDB) Length = 476 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +1 Query: 325 CVSVRPPACFLPEKLLVESTSRSTTKGN 408 C S P CFL E+L ++ S TT N Sbjct: 190 CTSASPTVCFLKERLQIKHLSLLTTLSN 217 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,807,129 Number of Sequences: 219361 Number of extensions: 860114 Number of successful extensions: 2311 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2293 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2311 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)