ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet122b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TIRAP_MOUSE (Q99JY1) Toll-interleukin 1 receptor domain-containi... 32 0.29
2PLSX_PSEPK (Q88LL8) Fatty acid/phospholipid synthesis protein plsX 31 0.85
3EHMT2_MOUSE (Q9Z148) Histone-lysine N-methyltransferase, H3 lysi... 30 1.1
4EHMT2_HUMAN (Q96KQ7) Histone-lysine N-methyltransferase, H3 lysi... 30 1.1
5GLNQ_BACST (P27675) Glutamine transport ATP-binding protein glnQ 30 1.5
6ENV_MPMV (P07575) Env polyprotein precursor (Coat polyprotein) [... 30 1.5
7SYY_COREF (Q8FTM1) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin... 30 1.5
8YK82_YEAST (P36170) Hypothetical protein YKR102W precursor 29 2.5
9PDXK_RAT (O35331) Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kin... 29 2.5
10CCDC6_HUMAN (Q16204) Coiled-coil domain-containing protein 6 (H4... 29 2.5
11LPHN3_HUMAN (Q9HAR2) Latrophilin-3 precursor (Calcium-independen... 29 3.2
12NH213_CAEEL (O18048) Nuclear hormone receptor family member nhr-213 28 4.2
13EMBA_MYCAV (P71485) Probable arabinosyltransferase A (EC 2.4.2.-) 28 4.2
14NGFV2_TROCA (Q3HXX7) Venom nerve growth factor 2 precursor (vNGF-2) 28 5.5
15HCFC1_MOUSE (Q61191) Host cell factor (HCF) (HCF-1) (C1 factor) ... 28 5.5
16GLMM_XANC5 (Q3BRL9) Phosphoglucosamine mutase (EC 5.4.2.10) 28 5.5
17RIR1_YEAST (P21524) Ribonucleoside-diphosphate reductase large c... 28 5.5
18SYY_CORGL (Q8NQM8) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin... 28 5.5
19IF3X_YEAST (Q03690) Eukaryotic translation initiation factor 3 1... 28 5.5
20CSN5_ASHGO (Q75E19) COP9 signalosome complex subunit 5 (EC 3.4.-.-) 28 5.5
21PZP_HUMAN (P20742) Pregnancy zone protein precursor 28 5.5
22MOT1_MOUSE (P53986) Monocarboxylate transporter 1 (MCT 1) 28 5.5
23HCFC1_MESAU (P51611) Host cell factor (HCF) (HCF-1) (C1 factor) ... 28 5.5
24SYY_NOCFA (Q5YYA4) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin... 28 7.2
25YG14_YEAST (P53203) Hypothetical 52.9 kDa protein in ERP6-TFG2 i... 28 7.2
26MOT1_RAT (P53987) Monocarboxylate transporter 1 (MCT 1) 28 7.2
27PGCB_BOVIN (Q28062) Brevican core protein precursor 27 9.4
28DPOLZ_HUMAN (O60673) DNA polymerase zeta catalytic subunit (EC 2... 27 9.4
29L2HDH_PONPY (Q5R9N7) L-2-hydroxyglutarate dehydrogenase, mitocho... 27 9.4
30GLMM_XANAC (Q8PJ31) Phosphoglucosamine mutase (EC 5.4.2.10) 27 9.4
31PTA1_YEAST (Q01329) Pre-tRNA-processing protein PTA1 27 9.4
32PGCB_RAT (P55068) Brevican core protein precursor (Brain-enriche... 27 9.4
33PGCB_MOUSE (Q61361) Brevican core protein precursor 27 9.4
34AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor 27 9.4
35HCFC1_HUMAN (P51610) Host cell factor (HCF) (HCF-1) (C1 factor) ... 27 9.4
36PGCB_HUMAN (Q96GW7) Brevican core protein precursor (Brain-enric... 27 9.4
37RIR3_YEAST (P21672) Ribonucleoside-diphosphate reductase large c... 27 9.4
38IL16_HUMAN (Q14005) Interleukin-16 precursor (IL-16) (Lymphocyte... 27 9.4

>TIRAP_MOUSE (Q99JY1) Toll-interleukin 1 receptor domain-containing adapter|
           protein (TIR domain-containing adapter protein) (MyD88
           adapter-like protein) (Adaptor protein Wyatt)
          Length = 241

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
 Frame = +1

Query: 76  LSPSHKKAPKPAASRTRCVSSVNVSVTVLPSLALTEPSSSTLISGRPNK---ACVCFSIS 246
           LSPS   +P   +S     S  + S  + P+   T   SS+  SGR +K    CVC S  
Sbjct: 56  LSPSSCSSPPSHSSPESRSSPSSCSSGMSPTSPPTHVDSSSSSSGRWSKDYDVCVCHSEE 115

Query: 247 ETDSFDLMVAYLCNVSASSR 306
           + ++   +V+YL    AS R
Sbjct: 116 DLEAAQELVSYLEGSQASLR 135



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>PLSX_PSEPK (Q88LL8) Fatty acid/phospholipid synthesis protein plsX|
          Length = 336

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
 Frame = -1

Query: 332 PNKLRSYVSRLDADTLQRYATIRSKESVSLIEKQTQALFGRPD------IKVLDDGSVNA 171
           P+ L   +S L A    R   + + E V + E+ +QAL G+PD      ++++ DG   A
Sbjct: 42  PSLLEDLISGLPAADRARLQVVAASEVVGMDERPSQALRGKPDSSMRIALELVRDGKAQA 101

Query: 170 KDGKTVTLTFTELTHLVLE 114
                 T     L+  VL+
Sbjct: 102 CVSAGNTGALMALSRFVLK 120



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>EHMT2_MOUSE (Q9Z148) Histone-lysine N-methyltransferase, H3 lysine-9 specific 3|
           (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3)
           (H3-K9-HMTase 3) (Euchromatic histone-lysine
           N-methyltransferase 2) (HLA-B-associated transcript 8)
           (Protein G9a)
          Length = 1263

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
 Frame = +1

Query: 52  KWYLDSTWLSPSHK--KAPKPAASRTRCVSSVNVS----VTVLPSLALTEPSSSTLISGR 213
           KW  DS W+ PS K  K   P A   R V+ V  S       +P  +L  PS  TL    
Sbjct: 398 KWRKDSPWVKPSRKRRKREPPRAKEPRGVNGVGSSGPSEYMEVPLGSLELPSEGTL---S 454

Query: 214 PNKACVCFSISETDS 258
           PN A V    S  ++
Sbjct: 455 PNHAGVSNDTSSLET 469



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>EHMT2_HUMAN (Q96KQ7) Histone-lysine N-methyltransferase, H3 lysine-9 specific 3|
           (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3)
           (H3-K9-HMTase 3) (Euchromatic histone-lysine
           N-methyltransferase 2) (HLA-B-associated transcript 8)
           (Protein G9a)
          Length = 1210

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
 Frame = +1

Query: 52  KWYLDSTWLSPSHK--KAPKPAASRTRCVSSVNVS----VTVLPSLALTEPSSSTLISGR 213
           KW  DS W+ PS K  K   P A   R V+ V  S       +P  +L  PS  TL    
Sbjct: 345 KWRKDSPWVKPSRKRRKREPPRAKEPRGVNGVGSSGPSEYMEVPLGSLELPSEGTL---S 401

Query: 214 PNKACVCFSISETDS 258
           PN A V    S  ++
Sbjct: 402 PNHAGVSNDTSSLET 416



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>GLNQ_BACST (P27675) Glutamine transport ATP-binding protein glnQ|
          Length = 242

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = -1

Query: 332 PNKLRSYVSRLDADTLQRYATIRS---KESVSLIEKQTQALFGRPDIKVLDDGSVNAKDG 162
           P+K  +Y S L     QR A  R    K  + L ++ T AL      +VLD     AK+G
Sbjct: 127 PDKANAYPSELSGGQQQRVAIARGLAMKPKIMLFDEPTSALDPETIGEVLDVMKQLAKEG 186

Query: 161 KTVTLTFTEL 132
            T+ +   E+
Sbjct: 187 MTMVVVTHEM 196



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>ENV_MPMV (P07575) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Coat protein GP70; Coat protein GP20]
          Length = 586

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = +1

Query: 112 ASRTRCVSSVNVSVTVLPSLALTEPSSSTLISGRPNKA 225
           AS T C S  NVS    PS +L  P+SS  + G  NKA
Sbjct: 314 ASFTNCSSYYNVSTASKPSNSLCAPNSSVFVCGN-NKA 350



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>SYY_COREF (Q8FTM1) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 421

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = -1

Query: 269 IRSKESVSLIEKQTQALFGRPDIKVLDDGSVNAKDGKT 156
           +  +E+ + +E   QALFGR +++ LD+ ++ A   +T
Sbjct: 306 VHGEEATAAVELAAQALFGRAELRDLDEKTLEASVSET 343



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>YK82_YEAST (P36170) Hypothetical protein YKR102W precursor|
          Length = 1169

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
 Frame = +1

Query: 85  SHKKAPKPAASRTRCVSSVNVSVT---VLPSLALTEPSSST---LISGRPNKACVCFSIS 246
           +H   P PA     CVSS   S +   V      TE +S     + S   + + VC   +
Sbjct: 283 AHCSVPNPAEHARTCVSSATSSWSSSEVCTECTETESTSYVTPYVTSSSWSSSEVCTECT 342

Query: 247 ETDSFDLMVAYLCNVSASSRE 309
           ET+S      Y+ + S+SS E
Sbjct: 343 ETESTSTSTPYVTSSSSSSSE 363



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>PDXK_RAT (O35331) Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)|
          Length = 312

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +3

Query: 186 IIQHFDIRPTKQSLRLLLYQRDRFLRPDGSVSLQRISVQPRDVGPQLV 329
           +I   D+   K S  L+     R  +PDGS   QRI ++ R V P  V
Sbjct: 184 VITSSDLPSPKGSDYLMALGSQRMRKPDGSTVTQRIRMEMRKVDPVFV 231



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>CCDC6_HUMAN (Q16204) Coiled-coil domain-containing protein 6 (H4 protein)|
           (Papillary thyroid carcinoma-encoded protein)
          Length = 585

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
 Frame = -1

Query: 356 VEEDEETNPNKLRSYVSRLDADTLQRYATIRS--KESVSL---IEKQTQALFGR 210
           +E+++E   NKL   + +L+ DT+ +  T+    +E + L   +E++ +AL  R
Sbjct: 163 LEQEQEFQVNKLMKKIKKLENDTISKQLTLEQLRREKIDLENTLEQEQEALVNR 216



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>LPHN3_HUMAN (Q9HAR2) Latrophilin-3 precursor (Calcium-independent|
           alpha-latrotoxin receptor 3) (Lectomedin-3)
          Length = 1447

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +1

Query: 49  TKWYLDSTWLSPSHKKAPKPAASRTRCVSSVNVSVTVLPSLALTEPSSSTLI 204
           T   L +T LSP     P  +  R R  S+ + +V VL  +    PS+S+ I
Sbjct: 440 TSTTLRTTTLSPGRSTTPSVSGRRNRSTSTPSPAVEVLDDMTTHLPSASSQI 491



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>NH213_CAEEL (O18048) Nuclear hormone receptor family member nhr-213|
          Length = 414

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
 Frame = -1

Query: 272 TIRSKESVSLIEKQTQALFGRP----DIKVLDDGSVNAKDGKTVTLTFTELTHLVLEAAG 105
           +I    S  LI +   A  G+P    DI  L     +  +GKT  L         LEAA 
Sbjct: 115 SIAQTNSFKLIPRSDNAFLGKPRTIMDISSLSTKIKSVLNGKTYNLDSAAKKMNSLEAAE 174

Query: 104 FGAFLWEGESHVESK 60
           +    W  +   E K
Sbjct: 175 YALKKWRSQQKTEDK 189



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>EMBA_MYCAV (P71485) Probable arabinosyltransferase A (EC 2.4.2.-)|
          Length = 1108

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 261 RPDGSVSLQRISVQPRDVGPQLVW 332
           RPDGS ++    VQP D+GPQ  W
Sbjct: 914 RPDGS-TVPLAEVQPIDIGPQPAW 936



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>NGFV2_TROCA (Q3HXX7) Venom nerve growth factor 2 precursor (vNGF-2)|
          Length = 244

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
 Frame = +1

Query: 25  IKMHNQLLTKWYLDSTWLSPSHKKAPKPAASRTRCVSS------VNVSVTVLPSLALTEP 186
           I ++N++  +++ ++   +PS    P P  S  R + S         + T + +L + E 
Sbjct: 165 INLNNEVYKQYFFETKCRNPS----PNPVQSECRGIDSRLWNSYCTTTQTFVRALTM-EG 219

Query: 187 SSSTLISGRPNKACVCFSISETDSF 261
           + ++    R + ACVC  I +TD+F
Sbjct: 220 NQASWRFIRIDTACVCVIIRKTDNF 244



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>HCFC1_MOUSE (Q61191) Host cell factor (HCF) (HCF-1) (C1 factor) [Contains: HCF|
           N-terminal chain 1; HCF N-terminal chain 2; HCF
           N-terminal chain 3; HCF N-terminal chain 4; HCF
           N-terminal chain 5; HCF N-terminal chain 6; HCF
           C-terminal chain 1; HCF C-termi
          Length = 2045

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 94  KAPKPAASRTRCVSSVNVSVTVLPSLALTEPSSSTL 201
           K+P PAA+         V +T++P  A   PS++T+
Sbjct: 426 KSPAPAAAAPAVQPLTQVGITLVPQAATAPPSTTTI 461



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>GLMM_XANC5 (Q3BRL9) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 449

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +3

Query: 180 RAIIQHFDIRPTKQSLRLLLYQRDR-FLRPDGSVSLQRISVQPRDVG 317
           +AI++  +++   Q  +  +  R R FLRP G+  + R++V+  D G
Sbjct: 386 KAIVEAVNVQQALQQAQAAVQGRGRAFLRPSGTEPVVRVTVEADDAG 432



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>RIR1_YEAST (P21524) Ribonucleoside-diphosphate reductase large chain 1 (EC|
           1.17.4.1) (Ribonucleotide reductase large subunit 1)
           (Ribonucleotide reductase R1 subunit 1)
          Length = 888

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
 Frame = -1

Query: 278 YATIRSKESVSLIEKQTQALFGRPDIKVLDD--GSVNAKDGKTVTLTFTELTHLVLE 114
           YAT+ ++ ++S + KQT   F     KV++D    VNA  GK   +   ++ ++V+E
Sbjct: 74  YATLAARIAISNLHKQTTKQFS----KVVEDLYRYVNAATGKPAPMISDDVYNIVME 126



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>SYY_CORGL (Q8NQM8) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 420

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -1

Query: 269 IRSKESVSLIEKQTQALFGRPDIKVLDDGSVNAKDGKT 156
           +   E+   +E   QALFGR +++ LD+ ++ A   +T
Sbjct: 304 VHGTEATEAVELAAQALFGRAELRDLDEKTLAASVSET 341



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>IF3X_YEAST (Q03690) Eukaryotic translation initiation factor 3 135 kDa subunit|
           (eIF3 p135) (Translation initiation factor eIF3, p135
           subunit)
          Length = 1277

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
 Frame = -1

Query: 356 VEEDEETNPNKLRSYVSRLDADTLQRYATIRS--KESVSLIEKQTQALFGRPDIKVLDDG 183
           VE+D +   +  +SY+ +++    +R A I    +E   + ++ T+      D+K+ D+ 
Sbjct: 735 VEQDNKEYEDWEKSYLQKIENMIKERQAKINKLVQEGKEVPKELTE------DLKLNDEE 788

Query: 182 SVNAKDGKTVTLTFTELTHLV 120
                DGK V + + EL  L+
Sbjct: 789 IKKPTDGKPVVVAYDELVPLI 809



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>CSN5_ASHGO (Q75E19) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 420

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +3

Query: 174 INRAIIQHFDIRPTKQSLRLLLYQRDRFLR 263
           +N A  ++FDI+    +L+LL YQ+ RF R
Sbjct: 386 LNAAETEYFDIKNELLTLKLLEYQKARFYR 415



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>PZP_HUMAN (P20742) Pregnancy zone protein precursor|
          Length = 1482

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 23/72 (31%), Positives = 35/72 (48%)
 Frame = +1

Query: 88  HKKAPKPAASRTRCVSSVNVSVTVLPSLALTEPSSSTLISGRPNKACVCFSISETDSFDL 267
           H +APK        +S +N +VTV          S++L SGR N++     ++E D F  
Sbjct: 39  HTEAPKKGCV---LLSHLNETVTV----------SASLESGRENRSLFTDLVAEKDLFHC 85

Query: 268 MVAYLCNVSASS 303
           +   L  +SASS
Sbjct: 86  VSFTLPRISASS 97



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>MOT1_MOUSE (P53986) Monocarboxylate transporter 1 (MCT 1)|
          Length = 493

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 120 PGGGWFWSLFVGG*EPCRIQIPFC*QLIVHFDNLEMVF 7
           P GGW W++ VG          F   + V F  +E++F
Sbjct: 14  PDGGWGWAVLVGAFISIGFSYAFPKSITVFFKEIEVIF 51



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>HCFC1_MESAU (P51611) Host cell factor (HCF) (HCF-1) (C1 factor) (VP16 accessory|
           protein) (VCAF) [Contains: HCF N-terminal chain 1; HCF
           N-terminal chain 2; HCF N-terminal chain 3; HCF
           N-terminal chain 4; HCF N-terminal chain 5; HCF
           N-terminal chain 6; HCF
          Length = 2090

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 94  KAPKPAASRTRCVSSVNVSVTVLPSLALTEPSSSTL 201
           K+P PAA+         V +T++P  A   PS++T+
Sbjct: 426 KSPAPAAAAPAVQPLTQVGITLVPQAAAAPPSTTTI 461



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>SYY_NOCFA (Q5YYA4) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 429

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = -1

Query: 269 IRSKESVSLIEKQTQALFGRPDIKVLDDGSVNA 171
           +  ++    ++  +QALFGR D++ LD+ ++ A
Sbjct: 308 VHGEQHTRAVQLASQALFGRGDLRELDEATLGA 340



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>YG14_YEAST (P53203) Hypothetical 52.9 kDa protein in ERP6-TFG2 intergenic|
           region
          Length = 462

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = +1

Query: 58  YLDSTWLSPSHKKAPKPAASRTRCVSSVNVSVTV--LPSLALTEPSSSTLISGRPNK 222
           Y D+TW +PS     K    R R + +  V+ T    P++    P+S  L S   N+
Sbjct: 369 YYDNTWNNPSATDTYKKYTRRRRWIRTATVTTTYDDEPTVEKATPNSHALKSEENNR 425



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>MOT1_RAT (P53987) Monocarboxylate transporter 1 (MCT 1)|
          Length = 494

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 120 PGGGWFWSLFVGG*EPCRIQIPFC*QLIVHFDNLEMVF 7
           P GGW W++ VG          F   + V F  +E++F
Sbjct: 14  PDGGWGWAVVVGAFISIGFSYAFPKSITVFFKEIEIIF 51



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>PGCB_BOVIN (Q28062) Brevican core protein precursor|
          Length = 912

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 276 RYHQVEGIGLADREANAGFVWSAG 205
           RY + + IGL DR     F+WS G
Sbjct: 739 RYREYQWIGLNDRTIEGDFLWSDG 762



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>DPOLZ_HUMAN (O60673) DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (hREV3)|
          Length = 3130

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/62 (24%), Positives = 29/62 (46%)
 Frame = -1

Query: 347 DEETNPNKLRSYVSRLDADTLQRYATIRSKESVSLIEKQTQALFGRPDIKVLDDGSVNAK 168
           ++E    + R+  S++     Q +  + + ES    +K+ Q +  + D  V   GSV+  
Sbjct: 266 EDEKQRRRNRNETSQMSQPESQDHRFVPATESEKKFQKRLQEILKQNDFSVTLSGSVDYS 325

Query: 167 DG 162
           DG
Sbjct: 326 DG 327



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>L2HDH_PONPY (Q5R9N7) L-2-hydroxyglutarate dehydrogenase, mitochondrial|
           precursor (EC 1.1.99.2) (Duranin)
          Length = 419

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 184 PSSSTLISGRPNKACVCFSISETDSFDLMV 273
           P +S L SGRP   C     + T SFD+++
Sbjct: 24  PGASGLASGRPRPLCGGSRSASTSSFDIVI 53



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>GLMM_XANAC (Q8PJ31) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 449

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +3

Query: 180 RAIIQHFDIRPTKQSLRLLLYQRDR-FLRPDGSVSLQRISVQPRDVG 317
           +AI++  +++   Q  +  +  R R FLRP G+  + R++V+  D G
Sbjct: 386 KAIVEAANVQQALQQAQAAVRGRGRAFLRPSGTEPVVRVTVEADDAG 432



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>PTA1_YEAST (Q01329) Pre-tRNA-processing protein PTA1|
          Length = 785

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
 Frame = +1

Query: 97  APKPAASRTRCVSSV------NVSVTVLPSLALTEPSSSTLISGRPNKACVCFSISETDS 258
           +PKP ++    V S+      N  VT LP+  L + S+  ++     K     SI  +  
Sbjct: 420 SPKPISNTYSSVYSLMNSSNSNQDVTQLPNDILIKLSTEAILQMDSTKLITGLSIVASRY 479

Query: 259 FDLMVAYLCNVSASS 303
            DLM  Y+ +V +SS
Sbjct: 480 TDLMNTYINSVPSSS 494



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>PGCB_RAT (P55068) Brevican core protein precursor (Brain-enriched|
           hyaluronan-binding protein) (BEHAB protein) [Contains:
           Brevican core protein isoform 1; Brevican core protein
           isoform 2]
          Length = 883

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 276 RYHQVEGIGLADREANAGFVWSAG 205
           RY + + IGL DR     F+WS G
Sbjct: 714 RYREYQWIGLNDRTIEGDFLWSDG 737



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>PGCB_MOUSE (Q61361) Brevican core protein precursor|
          Length = 883

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 276 RYHQVEGIGLADREANAGFVWSAG 205
           RY + + IGL DR     F+WS G
Sbjct: 714 RYREYQWIGLNDRTIEGDFLWSDG 737



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>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor|
          Length = 725

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +1

Query: 67  STWLSPSHKKAPKPAASRTRCVSSVNVSVT-VLPSLALTEPSSSTLIS 207
           ST  SPS K     + S +   +S + S+T   P+LA T PSS+++ S
Sbjct: 272 STSTSPSSKSTSASSTSTSSYSTSTSPSLTSSSPTLASTSPSSTSISS 319



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>HCFC1_HUMAN (P51610) Host cell factor (HCF) (HCF-1) (C1 factor) (VP16 accessory|
           protein) (VCAF) (CFF) [Contains: HCF N-terminal chain 1;
           HCF N-terminal chain 2; HCF N-terminal chain 3; HCF
           N-terminal chain 4; HCF N-terminal chain 5; HCF
           N-terminal chain
          Length = 2035

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 94  KAPKPAASRTRCVSSVNVSVTVLPSLALTEPSSSTL 201
           K+P PAA+         V +T+LP  A   P+++T+
Sbjct: 426 KSPAPAAAAPAVQPLTQVGITLLPQAAPAPPTTTTI 461



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>PGCB_HUMAN (Q96GW7) Brevican core protein precursor (Brain-enriched|
           hyaluronan-binding protein) (BEHAB protein)
          Length = 911

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 276 RYHQVEGIGLADREANAGFVWSAG 205
           RY + + IGL DR     F+WS G
Sbjct: 738 RYREYQWIGLNDRTIEGDFLWSDG 761



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>RIR3_YEAST (P21672) Ribonucleoside-diphosphate reductase large chain 2 (EC|
           1.17.4.1) (Ribonucleotide reductase large subunit 2)
           (Ribonucleotide reductase DNA damage-inducible
           regulatory subunit 2) (Ribonucleotide reductase R1
           subunit 2)
          Length = 869

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = -1

Query: 278 YATIRSKESVSLIEKQTQALFGRPDIKVLDD--GSVNAKDGKTVTLTFTELTHLVLE 114
           YAT+ ++ ++S + KQT   F     KV++D    +N   GK   +   E+ ++V+E
Sbjct: 74  YATLAARIAISNLHKQTTKQFS----KVIEDLHDWINPATGKHAPMISDEIYNIVME 126



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>IL16_HUMAN (Q14005) Interleukin-16 precursor (IL-16) (Lymphocyte|
           chemoattractant factor) (LCF)
          Length = 631

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
 Frame = -1

Query: 335 NPNKLRSYVSRLDA---DTLQRYATIRSKESVSLIEKQTQALFGRPDIKVLDDGSVNAKD 165
           N ++LR Y   L     D    +++++S +SV  +    +      ++KVLD+ ++   D
Sbjct: 349 NLSELREYTEGLTEAKEDDDGDHSSLQSGQSVISLLSSEELKKLIEEVKVLDEATLKQLD 408

Query: 164 GKTVTLTFTELTHLVLEAAGFGAFLWEGESHVESK 60
           G  VT+   E      E AG G F   G + +E+K
Sbjct: 409 GIHVTILHKE------EGAGLG-FSLAGGADLENK 436


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,774,654
Number of Sequences: 219361
Number of extensions: 1085053
Number of successful extensions: 3599
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 3489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3598
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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