| Clone Name | rbaet122b02 |
|---|---|
| Clone Library Name | barley_pub |
>TIRAP_MOUSE (Q99JY1) Toll-interleukin 1 receptor domain-containing adapter| protein (TIR domain-containing adapter protein) (MyD88 adapter-like protein) (Adaptor protein Wyatt) Length = 241 Score = 32.3 bits (72), Expect = 0.29 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 3/80 (3%) Frame = +1 Query: 76 LSPSHKKAPKPAASRTRCVSSVNVSVTVLPSLALTEPSSSTLISGRPNK---ACVCFSIS 246 LSPS +P +S S + S + P+ T SS+ SGR +K CVC S Sbjct: 56 LSPSSCSSPPSHSSPESRSSPSSCSSGMSPTSPPTHVDSSSSSSGRWSKDYDVCVCHSEE 115 Query: 247 ETDSFDLMVAYLCNVSASSR 306 + ++ +V+YL AS R Sbjct: 116 DLEAAQELVSYLEGSQASLR 135
>PLSX_PSEPK (Q88LL8) Fatty acid/phospholipid synthesis protein plsX| Length = 336 Score = 30.8 bits (68), Expect = 0.85 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 6/79 (7%) Frame = -1 Query: 332 PNKLRSYVSRLDADTLQRYATIRSKESVSLIEKQTQALFGRPD------IKVLDDGSVNA 171 P+ L +S L A R + + E V + E+ +QAL G+PD ++++ DG A Sbjct: 42 PSLLEDLISGLPAADRARLQVVAASEVVGMDERPSQALRGKPDSSMRIALELVRDGKAQA 101 Query: 170 KDGKTVTLTFTELTHLVLE 114 T L+ VL+ Sbjct: 102 CVSAGNTGALMALSRFVLK 120
>EHMT2_MOUSE (Q9Z148) Histone-lysine N-methyltransferase, H3 lysine-9 specific 3| (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3) (H3-K9-HMTase 3) (Euchromatic histone-lysine N-methyltransferase 2) (HLA-B-associated transcript 8) (Protein G9a) Length = 1263 Score = 30.4 bits (67), Expect = 1.1 Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 6/75 (8%) Frame = +1 Query: 52 KWYLDSTWLSPSHK--KAPKPAASRTRCVSSVNVS----VTVLPSLALTEPSSSTLISGR 213 KW DS W+ PS K K P A R V+ V S +P +L PS TL Sbjct: 398 KWRKDSPWVKPSRKRRKREPPRAKEPRGVNGVGSSGPSEYMEVPLGSLELPSEGTL---S 454 Query: 214 PNKACVCFSISETDS 258 PN A V S ++ Sbjct: 455 PNHAGVSNDTSSLET 469
>EHMT2_HUMAN (Q96KQ7) Histone-lysine N-methyltransferase, H3 lysine-9 specific 3| (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3) (H3-K9-HMTase 3) (Euchromatic histone-lysine N-methyltransferase 2) (HLA-B-associated transcript 8) (Protein G9a) Length = 1210 Score = 30.4 bits (67), Expect = 1.1 Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 6/75 (8%) Frame = +1 Query: 52 KWYLDSTWLSPSHK--KAPKPAASRTRCVSSVNVS----VTVLPSLALTEPSSSTLISGR 213 KW DS W+ PS K K P A R V+ V S +P +L PS TL Sbjct: 345 KWRKDSPWVKPSRKRRKREPPRAKEPRGVNGVGSSGPSEYMEVPLGSLELPSEGTL---S 401 Query: 214 PNKACVCFSISETDS 258 PN A V S ++ Sbjct: 402 PNHAGVSNDTSSLET 416
>GLNQ_BACST (P27675) Glutamine transport ATP-binding protein glnQ| Length = 242 Score = 30.0 bits (66), Expect = 1.5 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Frame = -1 Query: 332 PNKLRSYVSRLDADTLQRYATIRS---KESVSLIEKQTQALFGRPDIKVLDDGSVNAKDG 162 P+K +Y S L QR A R K + L ++ T AL +VLD AK+G Sbjct: 127 PDKANAYPSELSGGQQQRVAIARGLAMKPKIMLFDEPTSALDPETIGEVLDVMKQLAKEG 186 Query: 161 KTVTLTFTEL 132 T+ + E+ Sbjct: 187 MTMVVVTHEM 196
>ENV_MPMV (P07575) Env polyprotein precursor (Coat polyprotein) [Contains:| Coat protein GP70; Coat protein GP20] Length = 586 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/38 (47%), Positives = 21/38 (55%) Frame = +1 Query: 112 ASRTRCVSSVNVSVTVLPSLALTEPSSSTLISGRPNKA 225 AS T C S NVS PS +L P+SS + G NKA Sbjct: 314 ASFTNCSSYYNVSTASKPSNSLCAPNSSVFVCGN-NKA 350
>SYY_COREF (Q8FTM1) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 421 Score = 30.0 bits (66), Expect = 1.5 Identities = 12/38 (31%), Positives = 24/38 (63%) Frame = -1 Query: 269 IRSKESVSLIEKQTQALFGRPDIKVLDDGSVNAKDGKT 156 + +E+ + +E QALFGR +++ LD+ ++ A +T Sbjct: 306 VHGEEATAAVELAAQALFGRAELRDLDEKTLEASVSET 343
>YK82_YEAST (P36170) Hypothetical protein YKR102W precursor| Length = 1169 Score = 29.3 bits (64), Expect = 2.5 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 6/81 (7%) Frame = +1 Query: 85 SHKKAPKPAASRTRCVSSVNVSVT---VLPSLALTEPSSST---LISGRPNKACVCFSIS 246 +H P PA CVSS S + V TE +S + S + + VC + Sbjct: 283 AHCSVPNPAEHARTCVSSATSSWSSSEVCTECTETESTSYVTPYVTSSSWSSSEVCTECT 342 Query: 247 ETDSFDLMVAYLCNVSASSRE 309 ET+S Y+ + S+SS E Sbjct: 343 ETESTSTSTPYVTSSSSSSSE 363
>PDXK_RAT (O35331) Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)| Length = 312 Score = 29.3 bits (64), Expect = 2.5 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = +3 Query: 186 IIQHFDIRPTKQSLRLLLYQRDRFLRPDGSVSLQRISVQPRDVGPQLV 329 +I D+ K S L+ R +PDGS QRI ++ R V P V Sbjct: 184 VITSSDLPSPKGSDYLMALGSQRMRKPDGSTVTQRIRMEMRKVDPVFV 231
>CCDC6_HUMAN (Q16204) Coiled-coil domain-containing protein 6 (H4 protein)| (Papillary thyroid carcinoma-encoded protein) Length = 585 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 5/54 (9%) Frame = -1 Query: 356 VEEDEETNPNKLRSYVSRLDADTLQRYATIRS--KESVSL---IEKQTQALFGR 210 +E+++E NKL + +L+ DT+ + T+ +E + L +E++ +AL R Sbjct: 163 LEQEQEFQVNKLMKKIKKLENDTISKQLTLEQLRREKIDLENTLEQEQEALVNR 216
>LPHN3_HUMAN (Q9HAR2) Latrophilin-3 precursor (Calcium-independent| alpha-latrotoxin receptor 3) (Lectomedin-3) Length = 1447 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +1 Query: 49 TKWYLDSTWLSPSHKKAPKPAASRTRCVSSVNVSVTVLPSLALTEPSSSTLI 204 T L +T LSP P + R R S+ + +V VL + PS+S+ I Sbjct: 440 TSTTLRTTTLSPGRSTTPSVSGRRNRSTSTPSPAVEVLDDMTTHLPSASSQI 491
>NH213_CAEEL (O18048) Nuclear hormone receptor family member nhr-213| Length = 414 Score = 28.5 bits (62), Expect = 4.2 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 4/75 (5%) Frame = -1 Query: 272 TIRSKESVSLIEKQTQALFGRP----DIKVLDDGSVNAKDGKTVTLTFTELTHLVLEAAG 105 +I S LI + A G+P DI L + +GKT L LEAA Sbjct: 115 SIAQTNSFKLIPRSDNAFLGKPRTIMDISSLSTKIKSVLNGKTYNLDSAAKKMNSLEAAE 174 Query: 104 FGAFLWEGESHVESK 60 + W + E K Sbjct: 175 YALKKWRSQQKTEDK 189
>EMBA_MYCAV (P71485) Probable arabinosyltransferase A (EC 2.4.2.-)| Length = 1108 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +3 Query: 261 RPDGSVSLQRISVQPRDVGPQLVW 332 RPDGS ++ VQP D+GPQ W Sbjct: 914 RPDGS-TVPLAEVQPIDIGPQPAW 936
>NGFV2_TROCA (Q3HXX7) Venom nerve growth factor 2 precursor (vNGF-2)| Length = 244 Score = 28.1 bits (61), Expect = 5.5 Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 6/85 (7%) Frame = +1 Query: 25 IKMHNQLLTKWYLDSTWLSPSHKKAPKPAASRTRCVSS------VNVSVTVLPSLALTEP 186 I ++N++ +++ ++ +PS P P S R + S + T + +L + E Sbjct: 165 INLNNEVYKQYFFETKCRNPS----PNPVQSECRGIDSRLWNSYCTTTQTFVRALTM-EG 219 Query: 187 SSSTLISGRPNKACVCFSISETDSF 261 + ++ R + ACVC I +TD+F Sbjct: 220 NQASWRFIRIDTACVCVIIRKTDNF 244
>HCFC1_MOUSE (Q61191) Host cell factor (HCF) (HCF-1) (C1 factor) [Contains: HCF| N-terminal chain 1; HCF N-terminal chain 2; HCF N-terminal chain 3; HCF N-terminal chain 4; HCF N-terminal chain 5; HCF N-terminal chain 6; HCF C-terminal chain 1; HCF C-termi Length = 2045 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +1 Query: 94 KAPKPAASRTRCVSSVNVSVTVLPSLALTEPSSSTL 201 K+P PAA+ V +T++P A PS++T+ Sbjct: 426 KSPAPAAAAPAVQPLTQVGITLVPQAATAPPSTTTI 461
>GLMM_XANC5 (Q3BRL9) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 449 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = +3 Query: 180 RAIIQHFDIRPTKQSLRLLLYQRDR-FLRPDGSVSLQRISVQPRDVG 317 +AI++ +++ Q + + R R FLRP G+ + R++V+ D G Sbjct: 386 KAIVEAVNVQQALQQAQAAVQGRGRAFLRPSGTEPVVRVTVEADDAG 432
>RIR1_YEAST (P21524) Ribonucleoside-diphosphate reductase large chain 1 (EC| 1.17.4.1) (Ribonucleotide reductase large subunit 1) (Ribonucleotide reductase R1 subunit 1) Length = 888 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Frame = -1 Query: 278 YATIRSKESVSLIEKQTQALFGRPDIKVLDD--GSVNAKDGKTVTLTFTELTHLVLE 114 YAT+ ++ ++S + KQT F KV++D VNA GK + ++ ++V+E Sbjct: 74 YATLAARIAISNLHKQTTKQFS----KVVEDLYRYVNAATGKPAPMISDDVYNIVME 126
>SYY_CORGL (Q8NQM8) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 420 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = -1 Query: 269 IRSKESVSLIEKQTQALFGRPDIKVLDDGSVNAKDGKT 156 + E+ +E QALFGR +++ LD+ ++ A +T Sbjct: 304 VHGTEATEAVELAAQALFGRAELRDLDEKTLAASVSET 341
>IF3X_YEAST (Q03690) Eukaryotic translation initiation factor 3 135 kDa subunit| (eIF3 p135) (Translation initiation factor eIF3, p135 subunit) Length = 1277 Score = 28.1 bits (61), Expect = 5.5 Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 2/81 (2%) Frame = -1 Query: 356 VEEDEETNPNKLRSYVSRLDADTLQRYATIRS--KESVSLIEKQTQALFGRPDIKVLDDG 183 VE+D + + +SY+ +++ +R A I +E + ++ T+ D+K+ D+ Sbjct: 735 VEQDNKEYEDWEKSYLQKIENMIKERQAKINKLVQEGKEVPKELTE------DLKLNDEE 788 Query: 182 SVNAKDGKTVTLTFTELTHLV 120 DGK V + + EL L+ Sbjct: 789 IKKPTDGKPVVVAYDELVPLI 809
>CSN5_ASHGO (Q75E19) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 420 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +3 Query: 174 INRAIIQHFDIRPTKQSLRLLLYQRDRFLR 263 +N A ++FDI+ +L+LL YQ+ RF R Sbjct: 386 LNAAETEYFDIKNELLTLKLLEYQKARFYR 415
>PZP_HUMAN (P20742) Pregnancy zone protein precursor| Length = 1482 Score = 28.1 bits (61), Expect = 5.5 Identities = 23/72 (31%), Positives = 35/72 (48%) Frame = +1 Query: 88 HKKAPKPAASRTRCVSSVNVSVTVLPSLALTEPSSSTLISGRPNKACVCFSISETDSFDL 267 H +APK +S +N +VTV S++L SGR N++ ++E D F Sbjct: 39 HTEAPKKGCV---LLSHLNETVTV----------SASLESGRENRSLFTDLVAEKDLFHC 85 Query: 268 MVAYLCNVSASS 303 + L +SASS Sbjct: 86 VSFTLPRISASS 97
>MOT1_MOUSE (P53986) Monocarboxylate transporter 1 (MCT 1)| Length = 493 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/38 (31%), Positives = 18/38 (47%) Frame = -3 Query: 120 PGGGWFWSLFVGG*EPCRIQIPFC*QLIVHFDNLEMVF 7 P GGW W++ VG F + V F +E++F Sbjct: 14 PDGGWGWAVLVGAFISIGFSYAFPKSITVFFKEIEVIF 51
>HCFC1_MESAU (P51611) Host cell factor (HCF) (HCF-1) (C1 factor) (VP16 accessory| protein) (VCAF) [Contains: HCF N-terminal chain 1; HCF N-terminal chain 2; HCF N-terminal chain 3; HCF N-terminal chain 4; HCF N-terminal chain 5; HCF N-terminal chain 6; HCF Length = 2090 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +1 Query: 94 KAPKPAASRTRCVSSVNVSVTVLPSLALTEPSSSTL 201 K+P PAA+ V +T++P A PS++T+ Sbjct: 426 KSPAPAAAAPAVQPLTQVGITLVPQAAAAPPSTTTI 461
>SYY_NOCFA (Q5YYA4) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 429 Score = 27.7 bits (60), Expect = 7.2 Identities = 10/33 (30%), Positives = 21/33 (63%) Frame = -1 Query: 269 IRSKESVSLIEKQTQALFGRPDIKVLDDGSVNA 171 + ++ ++ +QALFGR D++ LD+ ++ A Sbjct: 308 VHGEQHTRAVQLASQALFGRGDLRELDEATLGA 340
>YG14_YEAST (P53203) Hypothetical 52.9 kDa protein in ERP6-TFG2 intergenic| region Length = 462 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Frame = +1 Query: 58 YLDSTWLSPSHKKAPKPAASRTRCVSSVNVSVTV--LPSLALTEPSSSTLISGRPNK 222 Y D+TW +PS K R R + + V+ T P++ P+S L S N+ Sbjct: 369 YYDNTWNNPSATDTYKKYTRRRRWIRTATVTTTYDDEPTVEKATPNSHALKSEENNR 425
>MOT1_RAT (P53987) Monocarboxylate transporter 1 (MCT 1)| Length = 494 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/38 (31%), Positives = 18/38 (47%) Frame = -3 Query: 120 PGGGWFWSLFVGG*EPCRIQIPFC*QLIVHFDNLEMVF 7 P GGW W++ VG F + V F +E++F Sbjct: 14 PDGGWGWAVVVGAFISIGFSYAFPKSITVFFKEIEIIF 51
>PGCB_BOVIN (Q28062) Brevican core protein precursor| Length = 912 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -3 Query: 276 RYHQVEGIGLADREANAGFVWSAG 205 RY + + IGL DR F+WS G Sbjct: 739 RYREYQWIGLNDRTIEGDFLWSDG 762
>DPOLZ_HUMAN (O60673) DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (hREV3)| Length = 3130 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/62 (24%), Positives = 29/62 (46%) Frame = -1 Query: 347 DEETNPNKLRSYVSRLDADTLQRYATIRSKESVSLIEKQTQALFGRPDIKVLDDGSVNAK 168 ++E + R+ S++ Q + + + ES +K+ Q + + D V GSV+ Sbjct: 266 EDEKQRRRNRNETSQMSQPESQDHRFVPATESEKKFQKRLQEILKQNDFSVTLSGSVDYS 325 Query: 167 DG 162 DG Sbjct: 326 DG 327
>L2HDH_PONPY (Q5R9N7) L-2-hydroxyglutarate dehydrogenase, mitochondrial| precursor (EC 1.1.99.2) (Duranin) Length = 419 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +1 Query: 184 PSSSTLISGRPNKACVCFSISETDSFDLMV 273 P +S L SGRP C + T SFD+++ Sbjct: 24 PGASGLASGRPRPLCGGSRSASTSSFDIVI 53
>GLMM_XANAC (Q8PJ31) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 449 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = +3 Query: 180 RAIIQHFDIRPTKQSLRLLLYQRDR-FLRPDGSVSLQRISVQPRDVG 317 +AI++ +++ Q + + R R FLRP G+ + R++V+ D G Sbjct: 386 KAIVEAANVQQALQQAQAAVRGRGRAFLRPSGTEPVVRVTVEADDAG 432
>PTA1_YEAST (Q01329) Pre-tRNA-processing protein PTA1| Length = 785 Score = 27.3 bits (59), Expect = 9.4 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%) Frame = +1 Query: 97 APKPAASRTRCVSSV------NVSVTVLPSLALTEPSSSTLISGRPNKACVCFSISETDS 258 +PKP ++ V S+ N VT LP+ L + S+ ++ K SI + Sbjct: 420 SPKPISNTYSSVYSLMNSSNSNQDVTQLPNDILIKLSTEAILQMDSTKLITGLSIVASRY 479 Query: 259 FDLMVAYLCNVSASS 303 DLM Y+ +V +SS Sbjct: 480 TDLMNTYINSVPSSS 494
>PGCB_RAT (P55068) Brevican core protein precursor (Brain-enriched| hyaluronan-binding protein) (BEHAB protein) [Contains: Brevican core protein isoform 1; Brevican core protein isoform 2] Length = 883 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -3 Query: 276 RYHQVEGIGLADREANAGFVWSAG 205 RY + + IGL DR F+WS G Sbjct: 714 RYREYQWIGLNDRTIEGDFLWSDG 737
>PGCB_MOUSE (Q61361) Brevican core protein precursor| Length = 883 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -3 Query: 276 RYHQVEGIGLADREANAGFVWSAG 205 RY + + IGL DR F+WS G Sbjct: 714 RYREYQWIGLNDRTIEGDFLWSDG 737
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = +1 Query: 67 STWLSPSHKKAPKPAASRTRCVSSVNVSVT-VLPSLALTEPSSSTLIS 207 ST SPS K + S + +S + S+T P+LA T PSS+++ S Sbjct: 272 STSTSPSSKSTSASSTSTSSYSTSTSPSLTSSSPTLASTSPSSTSISS 319
>HCFC1_HUMAN (P51610) Host cell factor (HCF) (HCF-1) (C1 factor) (VP16 accessory| protein) (VCAF) (CFF) [Contains: HCF N-terminal chain 1; HCF N-terminal chain 2; HCF N-terminal chain 3; HCF N-terminal chain 4; HCF N-terminal chain 5; HCF N-terminal chain Length = 2035 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +1 Query: 94 KAPKPAASRTRCVSSVNVSVTVLPSLALTEPSSSTL 201 K+P PAA+ V +T+LP A P+++T+ Sbjct: 426 KSPAPAAAAPAVQPLTQVGITLLPQAAPAPPTTTTI 461
>PGCB_HUMAN (Q96GW7) Brevican core protein precursor (Brain-enriched| hyaluronan-binding protein) (BEHAB protein) Length = 911 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -3 Query: 276 RYHQVEGIGLADREANAGFVWSAG 205 RY + + IGL DR F+WS G Sbjct: 738 RYREYQWIGLNDRTIEGDFLWSDG 761
>RIR3_YEAST (P21672) Ribonucleoside-diphosphate reductase large chain 2 (EC| 1.17.4.1) (Ribonucleotide reductase large subunit 2) (Ribonucleotide reductase DNA damage-inducible regulatory subunit 2) (Ribonucleotide reductase R1 subunit 2) Length = 869 Score = 27.3 bits (59), Expect = 9.4 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Frame = -1 Query: 278 YATIRSKESVSLIEKQTQALFGRPDIKVLDD--GSVNAKDGKTVTLTFTELTHLVLE 114 YAT+ ++ ++S + KQT F KV++D +N GK + E+ ++V+E Sbjct: 74 YATLAARIAISNLHKQTTKQFS----KVIEDLHDWINPATGKHAPMISDEIYNIVME 126
>IL16_HUMAN (Q14005) Interleukin-16 precursor (IL-16) (Lymphocyte| chemoattractant factor) (LCF) Length = 631 Score = 27.3 bits (59), Expect = 9.4 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 3/95 (3%) Frame = -1 Query: 335 NPNKLRSYVSRLDA---DTLQRYATIRSKESVSLIEKQTQALFGRPDIKVLDDGSVNAKD 165 N ++LR Y L D +++++S +SV + + ++KVLD+ ++ D Sbjct: 349 NLSELREYTEGLTEAKEDDDGDHSSLQSGQSVISLLSSEELKKLIEEVKVLDEATLKQLD 408 Query: 164 GKTVTLTFTELTHLVLEAAGFGAFLWEGESHVESK 60 G VT+ E E AG G F G + +E+K Sbjct: 409 GIHVTILHKE------EGAGLG-FSLAGGADLENK 436 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,774,654 Number of Sequences: 219361 Number of extensions: 1085053 Number of successful extensions: 3599 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 3489 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3598 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)