ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet122a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete... 100 2e-18
2gb|AC124818.7| Mus musculus chromosome 14, clone RP24-505E8, com... 42 0.49
3gb|AY372453.1| Uncultured marine proteobacterium ANT32C12 fosmid... 42 0.49
4gb|AY372452.1| Uncultured marine proteobacterium ANT8C10 fosmid ... 42 0.49
5gb|AC159166.4| Atelerix albiventris clone LB4-482N5, complete se... 42 0.49
6gb|AC158982.2| Mus musculus BAC clone RP23-235N21 from chromosom... 42 0.49
7gb|AC153121.15| Medicago truncatula clone mth2-80o14, complete s... 42 0.49
8gb|AC152351.7| Medicago truncatula clone mth2-75b20, complete se... 42 0.49
9gb|AC004037.1| Homo sapiens chromosome 5, BAC clone 64o24, BAC 5... 40 2.0
10emb|CR513781.13| Zebrafish DNA sequence from clone CH211-61A15 i... 40 2.0
11emb|Z92543.1|HS271G9 Human DNA sequence from clone RP1-271G9 on ... 40 2.0
12emb|AL590397.7| Human DNA sequence from clone RP11-376O21 on chr... 40 2.0
13emb|AL445926.5| Human DNA sequence from clone RP11-439I6 on chro... 40 2.0
14emb|AL356156.14| Human DNA sequence from clone RP11-351L5 on chr... 40 2.0
15gb|AC041039.8| Homo sapiens chromosome 8, clone RP11-273P3, comp... 40 2.0
16gb|AC129713.1| Homo sapiens chromosome 5 clone RP11-391B2, compl... 40 2.0
17gb|AC026689.6| Homo sapiens chromosome 5 clone CTB-55A14, comple... 40 2.0
18gb|AC022721.9| Homo sapiens, clone RP11-191H13, complete sequence 40 2.0
19gb|AC090466.5| Homo sapiens chromosome 8, clone RP11-619O19, com... 40 2.0
20gb|AC007354.3|T16B5 Arabidopsis thaliana chromosome 1 BAC T16B5 ... 40 2.0
21gb|AC008528.6|AC008528 Homo sapiens chromosome 5 clone CTC-473M1... 40 2.0
22emb|AL590078.2|HS381K22 Homo sapiens chromosome 9 BAC RP11-381K2... 40 2.0
23emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 40 2.0
24gb|AC125380.4| Mus musculus BAC clone RP23-204N23 from 1, comple... 40 2.0
25gb|AC133330.3| Homo sapiens chromosome 8 clone RP11-134N2, compl... 38 7.7
26emb|CT010435.4| Mouse DNA sequence from clone RP23-445H9 on chro... 38 7.7
27ref|XM_445399.1| Candida glabrata CBS138, CAGL0C05181g partial mRNA 38 7.7
28emb|CR394537.12| Zebrafish DNA sequence from clone CH211-119D19 ... 38 7.7
29ref|XM_651119.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 38 7.7
30emb|AL137839.6| Human DNA sequence from clone RP3-471C18 on chro... 38 7.7
31gb|AC136932.4| Homo sapiens chromosome 16 clone CTD-2522B17, com... 38 7.7
32gb|AC159208.2| Mus musculus BAC clone RP23-152K15 from chromosom... 38 7.7
33emb|CR380949.1| Candida glabrata strain CBS138 chromosome C comp... 38 7.7
34emb|BX649313.6| Zebrafish DNA sequence from clone DKEY-112A7 in ... 38 7.7
35emb|BX470146.8| Zebrafish DNA sequence from clone DKEY-126D11 in... 38 7.7
36gb|AC114321.2| Homo sapiens chromosome 5 clone RP11-710L15, comp... 38 7.7
37gb|AC122720.2| Homo sapiens chromosome 5 clone RP11-67M9, comple... 38 7.7
38gb|AC116618.4| Homo sapiens BAC clone RP11-98L17 from 4, complet... 38 7.7
39dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 38 7.7
40gb|AC104343.3| Homo sapiens chromosome 8, clone RP11-822K17, com... 38 7.7
41gb|AC021305.9| Homo sapiens chromosome 8, clone RP11-140B16, com... 38 7.7
42gb|AC079801.2| Homo sapiens BAC clone RP11-717F1 from 16, comple... 38 7.7
43gb|AC093749.3| Homo sapiens BAC clone RP11-30B7 from 4, complete... 38 7.7
44gb|AC104301.2| Homo sapiens chromosome 3 clone RP11-150N22, comp... 38 7.7
45gb|AC012410.10| Homo sapiens chromosome 8, clone RP11-354A3, com... 38 7.7
46gb|AC008876.6| Homo sapiens chromosome 5 clone CTD-2201P10, comp... 38 7.7
47gb|AC008568.7| Homo sapiens chromosome 5 clone CTC-546K23, compl... 38 7.7
48gb|AC016080.5|AC016080 Homo sapiens, clone RP11-23N14, complete ... 38 7.7
49gb|AC022486.4|AC022486 Homo sapiens BAC clone RP11-569J3 from Y,... 38 7.7
50gb|AC016720.9| Homo sapiens BAC clone RP11-326G23 from 2, comple... 38 7.7
51gb|AC019109.9| Homo sapiens BAC clone RP11-488C22 from 2, comple... 38 7.7
52gb|AC007379.2|AC007379 Homo sapiens BAC clone RP11-143C1 from Y,... 38 7.7
53gb|AC129664.7| Homo sapiens BAC clone RP11-237A9 from 4, complet... 38 7.7
54gb|AC127385.6| Homo sapiens BAC clone RP13-489M19 from 4, comple... 38 7.7
55gb|AC018639.8|AC018639 Human Chromosome 7 clone RP11-128A6, comp... 38 7.7
56gb|AY967181.1| Synthetic construct isolate FTT1722 unknown prote... 38 7.7
57gb|AF267168.3| Homo sapiens chromosome 8 clone RP11-134N2, compl... 38 7.7
58gb|AF254981.4| Homo sapiens chromosome 8 clone RP11-429D14 map 8... 38 7.7
59gb|AF245226.1|AF245226 Homo sapiens chromosome 21 map 21q21 clon... 38 7.7
60dbj|BS000047.1| Pan troglodytes chromosome 22 clone:PTB-109H19, ... 38 7.7
61ref|NG_004636.1| Homo sapiens chromosome Y palindromes P4 and P5... 38 7.7
62emb|Z99281.1|CEY57G11C Caenorhabditis elegans YAC Y57G11C, compl... 38 7.7
63emb|CR381594.6| Zebrafish DNA sequence from clone DKEY-12H3 in l... 38 7.7
64dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 7.7
65emb|AM233362.1| Francisella tularensis subsp. holarctica strain ... 38 7.7
66emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4... 38 7.7
67emb|BX005310.6| Zebrafish DNA sequence from clone CH211-214J2 in... 38 7.7
68dbj|AP001345.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 38 7.7 
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds
          Length = 1373

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 131/155 (84%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                        
Query: 4    tattaattattggaaaaggaaatatgatacaaagatgacagaaattacaagcttgtcacg 63
            |||| ||| ||| ||||||||| |||| |||||||||| |||||||||||||||||||| 
Sbjct: 1337 tatttattgttgaaaaaggaaaaatga-acaaagatga-agaaattacaagcttgtcac- 1281

                                                                        
Query: 64   taggctgctacatgaaaatatccttgcaaacctaaggcagtccattta-nnnnnnncatc 122
            ||||||| ||||||| ||||||||||||||| || |||||| | ||||        || |
Sbjct: 1280 taggctgttacatgataatatccttgcaaacatagggcagtgcctttatttttcttcagc 1221

                                               
Query: 123  aaagcagaccatccatacataaacaaagcacactg 157
            |||||| |||||||||||||||| |||||||||||
Sbjct: 1220 aaagcaaaccatccatacataaataaagcacactg 1186
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>gb|AC124818.7| Mus musculus chromosome 14, clone RP24-505E8, complete sequence
          Length = 159170

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 11    tattggaaaaggaaatatgatacaa 35
             |||| ||||||||||||||||||||
Sbjct: 49690 tattagaaaaggaaatatgatacaa 49666
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>gb|AY372453.1| Uncultured marine proteobacterium ANT32C12 fosmid clone
          Length = 39378

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 8    aattattggaaaaggaaatat 28
            |||||||||||||||||||||
Sbjct: 9763 aattattggaaaaggaaatat 9783
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>gb|AY372452.1| Uncultured marine proteobacterium ANT8C10 fosmid clone
          Length = 37903

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 8     aattattggaaaaggaaatat 28
             |||||||||||||||||||||
Sbjct: 22274 aattattggaaaaggaaatat 22294
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>gb|AC159166.4| Atelerix albiventris clone LB4-482N5, complete sequence
          Length = 61580

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 23    aaatatgatacaaagatgaca 43
             |||||||||||||||||||||
Sbjct: 33950 aaatatgatacaaagatgaca 33970
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>gb|AC158982.2| Mus musculus BAC clone RP23-235N21 from chromosome 14, complete sequence
          Length = 208135

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 11     tattggaaaaggaaatatgatacaa 35
              |||| ||||||||||||||||||||
Sbjct: 207329 tattagaaaaggaaatatgatacaa 207305
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>gb|AC153121.15| Medicago truncatula clone mth2-80o14, complete sequence
          Length = 115074

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 19   aaggaaatatgatacaaagatgacagaaa 47
            |||||||||||||  ||||||||||||||
Sbjct: 1179 aaggaaatatgatctaaagatgacagaaa 1151
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>gb|AC152351.7| Medicago truncatula clone mth2-75b20, complete sequence
          Length = 111786

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 19    aaggaaatatgatacaaagatgacagaaa 47
             |||||||||||||  ||||||||||||||
Sbjct: 46750 aaggaaatatgatctaaagatgacagaaa 46778
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>gb|AC004037.1| Homo sapiens chromosome 5, BAC clone 64o24, BAC 5001 (LBNL H101),
           complete sequence
          Length = 32424

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 17  aaaaggaaatatgatacaaa 36
           ||||||||||||||||||||
Sbjct: 546 aaaaggaaatatgatacaaa 527
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>emb|CR513781.13| Zebrafish DNA sequence from clone CH211-61A15 in linkage group 15,
              complete sequence
          Length = 158040

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     aaagatgacagaaattacaa 53
              ||||||||||||||||||||
Sbjct: 107644 aaagatgacagaaattacaa 107625
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>emb|Z92543.1|HS271G9 Human DNA sequence from clone RP1-271G9 on chromosome 6q22, complete
             sequence
          Length = 120376

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     ttaattattggaaaaggaaa 25
             ||||||||||||||||||||
Sbjct: 65117 ttaattattggaaaaggaaa 65136
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>emb|AL590397.7| Human DNA sequence from clone RP11-376O21 on chromosome 9 Contains the
             3' end of the PTPRD gene for protein tyrosine phosphatase,
             receptor type, D (HPTP, PTPD, HPTPD), complete sequence
          Length = 168323

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 3     atattaattattggaaaaggaaat 26
             |||||||||||||||| |||||||
Sbjct: 66621 atattaattattggaataggaaat 66644
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>emb|AL445926.5| Human DNA sequence from clone RP11-439I6 on chromosome 9 Contains the 3'
              end of the PTPRD gene for protein tyrosine phosphatase,
              receptor type, D (HPTP, PTPD, HPTPD), complete sequence
          Length = 167253

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 3      atattaattattggaaaaggaaat 26
              |||||||||||||||| |||||||
Sbjct: 123647 atattaattattggaataggaaat 123670
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>emb|AL356156.14| Human DNA sequence from clone RP11-351L5 on chromosome 9, complete
             sequence
          Length = 130598

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    gtaggctgctacatgaaaat 82
             ||||||||||||||||||||
Sbjct: 98648 gtaggctgctacatgaaaat 98667
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>gb|AC041039.8| Homo sapiens chromosome 8, clone RP11-273P3, complete sequence
          Length = 159332

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 33    caaagatgacagaaattacaagct 56
             |||||||||||||||| |||||||
Sbjct: 19726 caaagatgacagaaatgacaagct 19749
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>gb|AC129713.1| Homo sapiens chromosome 5 clone RP11-391B2, complete sequence
          Length = 65846

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 17  aaaaggaaatatgatacaaa 36
           ||||||||||||||||||||
Sbjct: 339 aaaaggaaatatgatacaaa 320
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>gb|AC026689.6| Homo sapiens chromosome 5 clone CTB-55A14, complete sequence
          Length = 215150

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   ataaacaaagcacactgcat 160
             ||||||||||||||||||||
Sbjct: 25688 ataaacaaagcacactgcat 25707
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>gb|AC022721.9| Homo sapiens, clone RP11-191H13, complete sequence
          Length = 164354

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 33    caaagatgacagaaattacaagct 56
             |||||||||||||||| |||||||
Sbjct: 19977 caaagatgacagaaatgacaagct 19954
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>gb|AC090466.5| Homo sapiens chromosome 8, clone RP11-619O19, complete sequence
          Length = 191049

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 33     caaagatgacagaaattacaagct 56
              |||||||||||||||| |||||||
Sbjct: 183486 caaagatgacagaaatgacaagct 183463
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>gb|AC007354.3|T16B5 Arabidopsis thaliana chromosome 1 BAC T16B5 sequence, complete sequence
          Length = 70116

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     aattattggaaaaggaaata 27
             ||||||||||||||||||||
Sbjct: 11508 aattattggaaaaggaaata 11527
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>gb|AC008528.6|AC008528 Homo sapiens chromosome 5 clone CTC-473M13, complete sequence
          Length = 125764

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    aaaaggaaatatgatacaaa 36
             ||||||||||||||||||||
Sbjct: 11658 aaaaggaaatatgatacaaa 11677
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>emb|AL590078.2|HS381K22 Homo sapiens chromosome 9 BAC RP11-381K22, complete sequence
          Length = 203175

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     gtaggctgctacatgaaaat 82
              ||||||||||||||||||||
Sbjct: 169511 gtaggctgctacatgaaaat 169492
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>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib
          Length = 2013089

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 18     aaaggaaatatgatacaaagatga 41
              ||||||| ||||||||||||||||
Sbjct: 875301 aaaggaagtatgatacaaagatga 875278
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>gb|AC125380.4| Mus musculus BAC clone RP23-204N23 from 1, complete sequence
          Length = 214005

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   tacataaacaaagcacactg 157
             ||||||||||||||||||||
Sbjct: 31022 tacataaacaaagcacactg 31003
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>gb|AC133330.3| Homo sapiens chromosome 8 clone RP11-134N2, complete sequence
          Length = 164916

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 34    aaagatgacagaaattaca 52
             |||||||||||||||||||
Sbjct: 80774 aaagatgacagaaattaca 80792
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>emb|CT010435.4| Mouse DNA sequence from clone RP23-445H9 on chromosome 12, complete
              sequence
          Length = 183240

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 70     gctacatgaaaatatcctt 88
              |||||||||||||||||||
Sbjct: 116110 gctacatgaaaatatcctt 116092
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>ref|XM_445399.1| Candida glabrata CBS138, CAGL0C05181g partial mRNA
          Length = 1446

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 43   agaaattacaagcttgtca 61
            |||||||||||||||||||
Sbjct: 1302 agaaattacaagcttgtca 1284
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>emb|CR394537.12| Zebrafish DNA sequence from clone CH211-119D19 in linkage group 16,
             complete sequence
          Length = 168543

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 131   ccatccatacataaacaaa 149
             |||||||||||||||||||
Sbjct: 87533 ccatccatacataaacaaa 87551
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>ref|XM_651119.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (16.t00044)
           partial mRNA
          Length = 663

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 2   gatattaattattggaaaa 20
           |||||||||||||||||||
Sbjct: 202 gatattaattattggaaaa 220
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>emb|AL137839.6| Human DNA sequence from clone RP3-471C18 on chromosome 6 Contains the
             3' end of two novel genes, complete sequence
          Length = 108793

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 3     atattaattattggaaaaggaaa 25
             |||||||||||| ||||||||||
Sbjct: 31625 atattaattatttgaaaaggaaa 31603
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>gb|AC136932.4| Homo sapiens chromosome 16 clone CTD-2522B17, complete sequence
          Length = 171882

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    ttattggaaaaggaaatat 28
             |||||||||||||||||||
Sbjct: 28576 ttattggaaaaggaaatat 28594
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>gb|AC159208.2| Mus musculus BAC clone RP23-152K15 from chromosome 13, complete sequence
          Length = 195714

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 20     aggaaatatgatacaaagatgac 42
              |||| ||||||||||||||||||
Sbjct: 140802 aggagatatgatacaaagatgac 140780
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>emb|CR380949.1| Candida glabrata strain CBS138 chromosome C complete sequence
          Length = 558804

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 43     agaaattacaagcttgtca 61
              |||||||||||||||||||
Sbjct: 494832 agaaattacaagcttgtca 494850
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>emb|BX649313.6| Zebrafish DNA sequence from clone DKEY-112A7 in linkage group 7,
             complete sequence
          Length = 104374

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 139   acataaacaaagcacactg 157
             |||||||||||||||||||
Sbjct: 29545 acataaacaaagcacactg 29563
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>emb|BX470146.8| Zebrafish DNA sequence from clone DKEY-126D11 in linkage group 7,
             complete sequence
          Length = 168554

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 139   acataaacaaagcacactg 157
             |||||||||||||||||||
Sbjct: 98867 acataaacaaagcacactg 98849
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>gb|AC114321.2| Homo sapiens chromosome 5 clone RP11-710L15, complete sequence
          Length = 158109

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 137   atacataaacaaagcacac 155
             |||||||||||||||||||
Sbjct: 10137 atacataaacaaagcacac 10119
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>gb|AC122720.2| Homo sapiens chromosome 5 clone RP11-67M9, complete sequence
          Length = 160505

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 137    atacataaacaaagcacac 155
              |||||||||||||||||||
Sbjct: 115415 atacataaacaaagcacac 115397
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>gb|AC116618.4| Homo sapiens BAC clone RP11-98L17 from 4, complete sequence
          Length = 153040

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 10   ttattggaaaaggaaatat 28
            |||||||||||||||||||
Sbjct: 7240 ttattggaaaaggaaatat 7258
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 9      attattggaaaaggaaata 27
              |||||||||||||||||||
Sbjct: 160942 attattggaaaaggaaata 160960
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>gb|AC104343.3| Homo sapiens chromosome 8, clone RP11-822K17, complete sequence
          Length = 203753

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     atattaattattggaaaag 21
             |||||||||||||||||||
Sbjct: 26759 atattaattattggaaaag 26777
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>gb|AC021305.9| Homo sapiens chromosome 8, clone RP11-140B16, complete sequence
          Length = 164916

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 34    aaagatgacagaaattaca 52
             |||||||||||||||||||
Sbjct: 80821 aaagatgacagaaattaca 80839
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>gb|AC079801.2| Homo sapiens BAC clone RP11-717F1 from 16, complete sequence
          Length = 177312

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    ttattggaaaaggaaatat 28
             |||||||||||||||||||
Sbjct: 80877 ttattggaaaaggaaatat 80859
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>gb|AC093749.3| Homo sapiens BAC clone RP11-30B7 from 4, complete sequence
          Length = 163102

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    ttattggaaaaggaaatat 28
             |||||||||||||||||||
Sbjct: 92639 ttattggaaaaggaaatat 92621
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>gb|AC104301.2| Homo sapiens chromosome 3 clone RP11-150N22, complete sequence
          Length = 189610

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     ttattggaaaaggaaatat 28
              |||||||||||||||||||
Sbjct: 128075 ttattggaaaaggaaatat 128057
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>gb|AC012410.10| Homo sapiens chromosome 8, clone RP11-354A3, complete sequence
          Length = 220715

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 3      atattaattattggaaaaggaaa 25
              ||||| |||||||||||||||||
Sbjct: 139631 atatttattattggaaaaggaaa 139653
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>gb|AC008876.6| Homo sapiens chromosome 5 clone CTD-2201P10, complete sequence
          Length = 152707

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 24    aatatgatacaaagatgacagaa 46
             ||||||||||||||| |||||||
Sbjct: 92193 aatatgatacaaagaagacagaa 92171
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>gb|AC008568.7| Homo sapiens chromosome 5 clone CTC-546K23, complete sequence
          Length = 152706

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 24    aatatgatacaaagatgacagaa 46
             ||||||||||||||| |||||||
Sbjct: 60515 aatatgatacaaagaagacagaa 60537
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>gb|AC016080.5|AC016080 Homo sapiens, clone RP11-23N14, complete sequence
          Length = 176921

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 3     atattaattattggaaaaggaaa 25
             ||||| |||||||||||||||||
Sbjct: 60134 atatttattattggaaaaggaaa 60112
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>gb|AC022486.4|AC022486 Homo sapiens BAC clone RP11-569J3 from Y, complete sequence
          Length = 156357

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 141    ataaacaaagcacactgca 159
              |||||||||||||||||||
Sbjct: 116672 ataaacaaagcacactgca 116690
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>gb|AC016720.9| Homo sapiens BAC clone RP11-326G23 from 2, complete sequence
          Length = 154318

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 134    tccatacataaacaaagca 152
              |||||||||||||||||||
Sbjct: 110651 tccatacataaacaaagca 110633
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>gb|AC019109.9| Homo sapiens BAC clone RP11-488C22 from 2, complete sequence
          Length = 165351

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 88     tgcaaacctaaggcagtcc 106
              |||||||||||||||||||
Sbjct: 121084 tgcaaacctaaggcagtcc 121102
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>gb|AC007379.2|AC007379 Homo sapiens BAC clone RP11-143C1 from Y, complete sequence
          Length = 174082

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 141   ataaacaaagcacactgca 159
             |||||||||||||||||||
Sbjct: 21693 ataaacaaagcacactgca 21675
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>gb|AC129664.7| Homo sapiens BAC clone RP11-237A9 from 4, complete sequence
          Length = 183495

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 13    ttggaaaaggaaatatgat 31
             |||||||||||||||||||
Sbjct: 64070 ttggaaaaggaaatatgat 64088
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>gb|AC127385.6| Homo sapiens BAC clone RP13-489M19 from 4, complete sequence
          Length = 262955

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 13    ttggaaaaggaaatatgat 31
             |||||||||||||||||||
Sbjct: 57934 ttggaaaaggaaatatgat 57916
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>gb|AC018639.8|AC018639 Human Chromosome 7 clone RP11-128A6, complete sequence
          Length = 157579

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 16    gaaaaggaaatatgataca 34
             |||||||||||||||||||
Sbjct: 84822 gaaaaggaaatatgataca 84840
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>gb|AY967181.1| Synthetic construct isolate FTT1722 unknown protein gene, complete
           cds
          Length = 1452

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 79  aaatatccttgcaaaccta 97
           |||||||||||||||||||
Sbjct: 360 aaatatccttgcaaaccta 378
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>gb|AF267168.3| Homo sapiens chromosome 8 clone RP11-134N2, complete sequence
          Length = 180957

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 34    aaagatgacagaaattaca 52
             |||||||||||||||||||
Sbjct: 96775 aaagatgacagaaattaca 96793
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>gb|AF254981.4| Homo sapiens chromosome 8 clone RP11-429D14 map 8q24.2, complete
             sequence
          Length = 202142

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 34    aaagatgacagaaattaca 52
             |||||||||||||||||||
Sbjct: 34939 aaagatgacagaaattaca 34957
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>gb|AF245226.1|AF245226 Homo sapiens chromosome 21 map 21q21 clone B845I12, complete sequence
          Length = 178237

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 29     gatacaaagatgacagaaa 47
              |||||||||||||||||||
Sbjct: 150716 gatacaaagatgacagaaa 150698
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>dbj|BS000047.1| Pan troglodytes chromosome 22 clone:PTB-109H19, map 22, complete
              sequences
          Length = 214118

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 29     gatacaaagatgacagaaa 47
              |||||||||||||||||||
Sbjct: 128284 gatacaaagatgacagaaa 128266
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>ref|NG_004636.1| Homo sapiens chromosome Y palindromes P4 and P5 (P4-P5@) on chromosome Y
          Length = 1351786

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 141     ataaacaaagcacactgca 159
               |||||||||||||||||||
Sbjct: 1174694 ataaacaaagcacactgca 1174676



 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 141     ataaacaaagcacactgca 159
               |||||||||||||||||||
Sbjct: 1113516 ataaacaaagcacactgca 1113534
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>emb|Z99281.1|CEY57G11C Caenorhabditis elegans YAC Y57G11C, complete sequence
          Length = 313573

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    tattggaaaaggaaatatg 29
             |||||||||||||||||||
Sbjct: 50736 tattggaaaaggaaatatg 50718
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>emb|CR381594.6| Zebrafish DNA sequence from clone DKEY-12H3 in linkage group 19,
            complete sequence
          Length = 182645

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 35   aagatgacagaaattacaa 53
            |||||||||||||||||||
Sbjct: 2156 aagatgacagaaattacaa 2174
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>dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, section 18/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 29     gatacaaagatgacagaaa 47
              |||||||||||||||||||
Sbjct: 287513 gatacaaagatgacagaaa 287495
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>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome
          Length = 1895994

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 79      aaatatccttgcaaaccta 97
               |||||||||||||||||||
Sbjct: 1794693 aaatatccttgcaaaccta 1794675
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>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome
          Length = 1892819

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 79      aaatatccttgcaaaccta 97
               |||||||||||||||||||
Sbjct: 1808638 aaatatccttgcaaaccta 1808620
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>emb|BX005310.6| Zebrafish DNA sequence from clone CH211-214J2 in linkage group 7,
              complete sequence
          Length = 221979

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 139    acataaacaaagcacactg 157
              |||||||||||||||||||
Sbjct: 180631 acataaacaaagcacactg 180649
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>dbj|AP001345.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B755I19,
             LL56-APP region, complete sequence
          Length = 24379

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 29    gatacaaagatgacagaaa 47
             |||||||||||||||||||
Sbjct: 10553 gatacaaagatgacagaaa 10535


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,853,358
Number of Sequences: 3902068
Number of extensions: 1853358
Number of successful extensions: 153382
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 151939
Number of HSP's gapped (non-prelim): 1442
length of query: 160
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 138
effective length of database: 17,147,199,772
effective search space: 2366313568536
effective search space used: 2366313568536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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