ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet122a06 |
|---|---|
| Clone Library Name | barley_pub |
>MTNN_TREPA (P96122) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 269 Score = 45.1 bits (105), Expect = 9e-05 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Frame = -1 Query: 465 RVTRVSKG--CSANVFLDNAEYRQFLRKQFGCTPVEMESAAVALVAHTQGVPFLTIRXXX 292 RV+R+ +G S ++F+ +A+ R + ++FG VEME AA A VA GVPF+ IR Sbjct: 158 RVSRLVEGRVASGDLFVSDAQTRARIIREFGAHGVEMEGAAFAHVASVNGVPFVIIRCIS 217 Query: 291 XXXXXXXXXGNEASTFIDIAAKNAVQVMLKFVPLL 187 F AA+ + + L+ + L Sbjct: 218 DGAGAEQDVSMSYKEFSTRAARRSALLTLRVLERL 252
>MTNN_BUCBP (Q89AQ7) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 252 Score = 41.6 bits (96), Expect = 0.001 Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 1/92 (1%) Frame = -1 Query: 438 SANVFLDNAEYRQFLRKQF-GCTPVEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXXG 262 S ++F+D E + L+K+F V+ME+AA+A V + +P L I+ Sbjct: 155 SGDIFIDTCEKKSLLKKRFPKAIAVDMEAAAIAHVCYQFNIPILIIK--SISDSSDINAA 212 Query: 261 NEASTFIDIAAKNAVQVMLKFVPLLGKSAEEM 166 + FI++A+KN+ V + + L K+ + + Sbjct: 213 DNFKYFINLASKNSSLVTINVLQTLFKNTKNI 244
>MTNN_HELPY (O24915) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 231 Score = 38.1 bits (87), Expect = 0.011 Identities = 24/81 (29%), Positives = 37/81 (45%) Frame = -1 Query: 438 SANVFLDNAEYRQFLRKQFGCTPVEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXXGN 259 S + F+ + E ++FL +F + VEME A+VA V GVP +R Sbjct: 150 SGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLR------SISDNADE 203 Query: 258 EASTFIDIAAKNAVQVMLKFV 196 EA+ D + + Q KF+ Sbjct: 204 EANMSFDAFLEKSAQTSAKFL 224
>MTNN_HELPJ (Q9ZMY2) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 230 Score = 36.2 bits (82), Expect = 0.043 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = -1 Query: 438 SANVFLDNAEYRQFLRKQFGCTPVEMESAAVALVAHTQGVPFLTIR 301 S + F+ + E ++FL +F + VEME A+VA V GVP +R Sbjct: 149 SGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLR 194
>MTNN_HAEIN (P45113) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 229 Score = 35.0 bits (79), Expect = 0.095 Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Frame = -1 Query: 441 CSANVFLDNAEYRQFLRKQF-GCTPVEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXX 265 CS + F+++ + ++ F T VEME+ A+A V + VPF+ +R Sbjct: 146 CSGDSFINSEDKIAQIKADFPNVTGVEMEATAIAQVCYAFNVPFVVVRAISDGGDGKASM 205 Query: 264 GNEASTFIDIAAKNAVQVMLKFVPLL 187 E F+ +AAK + ++L + L Sbjct: 206 SFE--EFLPLAAKQSSALVLGMIDRL 229
>MTNN_MYCTU (P67656) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 255 Score = 33.5 bits (75), Expect = 0.28 Identities = 20/73 (27%), Positives = 35/73 (47%) Frame = -1 Query: 405 RQFLRKQFGCTPVEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXXGNEASTFIDIAAK 226 R L + G VEME AVA + + +P+L IR + + F+ A Sbjct: 182 RNRLHHELGGMAVEMEGGAVAQICASFDIPWLVIRALSDLAGADSGV--DFNRFVGEVAA 239 Query: 225 NAVQVMLKFVPLL 187 ++ +V+L+ +P+L Sbjct: 240 SSARVLLRLLPVL 252
>MTNN_MYCBO (P67657) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 255 Score = 33.5 bits (75), Expect = 0.28 Identities = 20/73 (27%), Positives = 35/73 (47%) Frame = -1 Query: 405 RQFLRKQFGCTPVEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXXGNEASTFIDIAAK 226 R L + G VEME AVA + + +P+L IR + + F+ A Sbjct: 182 RNRLHHELGGMAVEMEGGAVAQICASFDIPWLVIRALSDLAGADSGV--DFNRFVGEVAA 239 Query: 225 NAVQVMLKFVPLL 187 ++ +V+L+ +P+L Sbjct: 240 SSARVLLRLLPVL 252
>MTNN_BACSU (O32028) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine| nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 231 Score = 33.1 bits (74), Expect = 0.36 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 3/90 (3%) Frame = -1 Query: 456 RVSKGCSA--NVFLDNAEYRQFLRKQFG-CTPVEMESAAVALVAHTQGVPFLTIRXXXXX 286 +V+KG A + F+++ + + +R +F VEME+AAVA V H PF+ IR Sbjct: 140 QVAKGTIATGDSFMNDPKRVEEVRARFSDLYAVEMEAAAVAQVCHQFKTPFVVIRALSDI 199 Query: 285 XXXXXXXGNEASTFIDIAAKNAVQVMLKFV 196 + F++ AA ++ +++LK + Sbjct: 200 AGKESHVSFD--QFLEQAAVHSTELVLKVI 227
>DEOD_CLOTE (Q894Z3) Purine nucleoside phosphorylase deoD-type (EC 2.4.2.1)| (PNP) Length = 235 Score = 30.8 bits (68), Expect = 1.8 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = -1 Query: 438 SANVFLDNAEYRQFLRKQFGCTPVEMESAAVALVAHTQGVPFLTI 304 S+++F D+ + ++GC VEME+AA+ +A GV LT+ Sbjct: 155 SSDIFYDDDKEDWKTWAKYGCLGVEMETAALYTIAAKYGVNALTL 199
>MTNN_SALTY (P60217) MTA/SAH nucleosidase (EC 3.2.2.9) (P46)| (5'-methylthioadenosine nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 232 Score = 30.0 bits (66), Expect = 3.1 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 1/85 (1%) Frame = -1 Query: 438 SANVFLDNAEYRQFLRKQF-GCTPVEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXXG 262 S + F++ + +R F VEME+ A+A V H VPF+ +R Sbjct: 147 SGDAFINGSVGLAKIRHNFPDAVAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLS 206 Query: 261 NEASTFIDIAAKNAVQVMLKFVPLL 187 + F+ +AAK + ++ V L Sbjct: 207 FD--EFLAVAAKQSTLMVETLVQKL 229
>MTNN_SALTI (P60216) MTA/SAH nucleosidase (EC 3.2.2.9) (P46)| (5'-methylthioadenosine nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 232 Score = 30.0 bits (66), Expect = 3.1 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 1/85 (1%) Frame = -1 Query: 438 SANVFLDNAEYRQFLRKQF-GCTPVEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXXG 262 S + F++ + +R F VEME+ A+A V H VPF+ +R Sbjct: 147 SGDAFINGSVGLAKIRHNFPDAVAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLS 206 Query: 261 NEASTFIDIAAKNAVQVMLKFVPLL 187 + F+ +AAK + ++ V L Sbjct: 207 FD--EFLAVAAKQSTLMVETLVQKL 229
>MTNN_SHIFL (P0AF15) MTA/SAH nucleosidase (EC 3.2.2.9) (P46)| (5'-methylthioadenosine nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 232 Score = 28.9 bits (63), Expect = 6.8 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -1 Query: 369 VEMESAAVALVAHTQGVPFLTIR 301 VEME+ A+A V H VPF+ +R Sbjct: 171 VEMEATAIAHVCHNFNVPFVVVR 193
>MTNN_ECOLI (P0AF12) MTA/SAH nucleosidase (EC 3.2.2.9) (P46)| (5'-methylthioadenosine nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 232 Score = 28.9 bits (63), Expect = 6.8 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -1 Query: 369 VEMESAAVALVAHTQGVPFLTIR 301 VEME+ A+A V H VPF+ +R Sbjct: 171 VEMEATAIAHVCHNFNVPFVVVR 193
>MTNN_ECOL6 (P0AF13) MTA/SAH nucleosidase (EC 3.2.2.9) (P46)| (5'-methylthioadenosine nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 232 Score = 28.9 bits (63), Expect = 6.8 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -1 Query: 369 VEMESAAVALVAHTQGVPFLTIR 301 VEME+ A+A V H VPF+ +R Sbjct: 171 VEMEATAIAHVCHNFNVPFVVVR 193
>MTNN_ECO57 (P0AF14) MTA/SAH nucleosidase (EC 3.2.2.9) (P46)| (5'-methylthioadenosine nucleosidase) (S-adenosylhomocysteine nucleosidase) Length = 232 Score = 28.9 bits (63), Expect = 6.8 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -1 Query: 369 VEMESAAVALVAHTQGVPFLTIR 301 VEME+ A+A V H VPF+ +R Sbjct: 171 VEMEATAIAHVCHNFNVPFVVVR 193
>ARGD_XYLFT (Q87DM8) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)| Length = 411 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 6/40 (15%) Frame = -1 Query: 258 EASTFIDIAAKNAVQVM------LKFVPLLGKSAEEMDDG 157 +AS +++AA++ V ++ L+FVP L S EE+ DG Sbjct: 355 QASAILEVAAEHGVLLLQAGPDVLRFVPALNVSDEELADG 394 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,624,385 Number of Sequences: 219361 Number of extensions: 594923 Number of successful extensions: 1727 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1711 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1727 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
