ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet11d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.11
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.11
3emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.11
4emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.11
5ref|NM_129314.2| Arabidopsis thaliana acetylglucosaminyltransfer... 42 0.45
6gb|AY142550.1| Arabidopsis thaliana clone RAFL08-11-L01 (R11180)... 42 0.45
7emb|BX324137.7| Zebrafish DNA sequence from clone CH211-42A2 in ... 42 0.45
8gb|AC004684.3| Arabidopsis thaliana chromosome 2 clone F13M22 ma... 42 0.45
9gb|AY729579.1| Banana mild mosaic virus clone 12_4 RNA-dependent... 40 1.8
10gb|AY729578.1| Banana mild mosaic virus clone 12_3 RNA-dependent... 40 1.8
11gb|AY729577.1| Banana mild mosaic virus clone 12_2 RNA-dependent... 40 1.8
12gb|AC144707.2| Danio rerio clone CH211-164N15, complete sequence 40 1.8
13ref|XM_853362.1| PREDICTED: Canis familiaris similar to bromodom... 40 1.8
14ref|XM_853324.1| PREDICTED: Canis familiaris similar to bromodom... 40 1.8
15ref|XM_853284.1| PREDICTED: Canis familiaris similar to bromodom... 40 1.8
16ref|XM_537803.2| PREDICTED: Canis familiaris similar to bromodom... 40 1.8
17ref|XM_853206.1| PREDICTED: Canis familiaris similar to bromodom... 40 1.8
18ref|XM_853167.1| PREDICTED: Canis familiaris similar to bromodom... 40 1.8
19ref|XM_844124.1| PREDICTED: Canis familiaris similar to bromodom... 40 1.8
20ref|XM_853085.1| PREDICTED: Canis familiaris similar to bromodom... 40 1.8
21ref|XM_853045.1| PREDICTED: Canis familiaris similar to bromodom... 40 1.8
22ref|XM_853006.1| PREDICTED: Canis familiaris similar to bromodom... 40 1.8
23ref|XM_852961.1| PREDICTED: Canis familiaris similar to bromodom... 40 1.8
24ref|XM_852921.1| PREDICTED: Canis familiaris similar to bromodom... 40 1.8
25gb|AC128649.5| Homo sapiens 12 BAC RP11-728G4 (Roswell Park Canc... 40 1.8
26gb|AC128657.2| Homo sapiens 12 BAC RP11-1079J22 (Roswell Park Ca... 40 1.8
27gb|AC006161.3| Arabidopsis thaliana chromosome 2 clone T14A4 map... 40 1.8
28dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.8
29dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.8
30dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.8
31gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055... 40 1.8
32dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.8
33dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic D... 40 1.8
34gb|AC120854.15| Mus musculus chromosome 7, clone RP23-329B6, com... 40 1.8
35dbj|AK064969.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.8
36emb|AL929206.6| Zebrafish DNA sequence from clone CH211-150E22 i... 40 1.8
37gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 1.8
38emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa... 40 1.8
39gb|AY729600.1| Banana mild mosaic virus clone 95_1 RNA-dependent... 38 7.0
40gb|AC161520.6| Mus musculus chromosome 7, clone RP24-282D19, com... 38 7.0
41gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome... 38 7.0
42gb|BC073093.1| Xenopus laevis similar to zinc finger RNA binding... 38 7.0
43gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome... 38 7.0
44gb|BC042260.1| Xenopus laevis similar to zinc finger RNA binding... 38 7.0
45gb|AC012626.10| Homo sapiens chromosome 16 clone CTD-2118O12, co... 38 7.0
46ref|XM_754325.1| Ustilago maydis 521 hypothetical protein (UM032... 38 7.0
47ref|XM_756060.1| Ustilago maydis 521 hypothetical protein (UM050... 38 7.0
48emb|CR538727.16| Zebrafish DNA sequence from clone DKEY-9G20 in ... 38 7.0
49gb|AC122809.4| Mus musculus BAC clone RP23-272E5 from chromosome... 38 7.0
50emb|AL450327.12| Human DNA sequence from clone RP11-173D14 on ch... 38 7.0
51gb|AC108924.5| Homo sapiens chromosome 8, clone RP11-1113C19, co... 38 7.0
52gb|AC153837.4| Mus musculus 6 BAC RP23-192D5 (Roswell Park Cance... 38 7.0
53emb|BX247888.10| Zebrafish DNA sequence from clone DKEY-10D15 in... 38 7.0
54gb|AC073391.3| Oryza sativa (japonica cultivar-group) chromosome... 38 7.0
55ref|XM_692780.1| PREDICTED: Danio rerio similar to contactin 4 i... 38 7.0
56gb|AC025656.7| Homo sapiens chromosome 18, clone RP11-36L19, com... 38 7.0
57ref|NM_069787.2| Caenorhabditis elegans Y24F12A.1 (Y24F12A.1) mR... 38 7.0
58dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.0
59gb|AC040173.5| Homo sapiens chromosome 16 clone RP11-65J21, comp... 38 7.0
60dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.0
61dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.0
62gb|AC007719.7|AC007719 Homo sapiens chromosome , clone RP11-3A12... 38 7.0
63gb|AC093798.3| Homo sapiens BAC clone RP11-306N14 from 2, comple... 38 7.0
64dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.0
65dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.0
66dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.0
67dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.0
68dbj|AK099470.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.0
69dbj|AK099469.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.0
70emb|AL844885.4| Mouse DNA sequence from clone RP23-226E14 on chr... 38 7.0
71dbj|AK062271.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.0
72gb|AC006221.1|AC006221 Homo sapiens chromosome 18, clone hRPK.14... 38 7.0
73gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete ge... 38 7.0
74gb|AC151572.2| Mus musculus BAC clone RP23-388I22 from 1, comple... 38 7.0
75gb|AC132305.3| Mus musculus BAC clone RP24-286A19 from 6, comple... 38 7.0
76gb|AC162175.10| Mus musculus chromosome 7, clone RP23-327E18, co... 38 7.0
77dbj|AP004287.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 38 7.0 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 46       atctgaagttctgaacatgcat 67
                ||||||||||||||||||||||
Sbjct: 23347447 atctgaagttctgaacatgcat 23347426



 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 43       gtgatctgaagttctgaaca 62
                ||||||||||||||||||||
Sbjct: 25540587 gtgatctgaagttctgaaca 25540606
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 46       atctgaagttctgaacatgcat 67
                ||||||||||||||||||||||
Sbjct: 23275638 atctgaagttctgaacatgcat 23275617



 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 43       gtgatctgaagttctgaaca 62
                ||||||||||||||||||||
Sbjct: 25468763 gtgatctgaagttctgaaca 25468782
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>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 168063

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 46     atctgaagttctgaacatgcat 67
              ||||||||||||||||||||||
Sbjct: 160565 atctgaagttctgaacatgcat 160544
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>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 162261

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 46     atctgaagttctgaacatgcat 67
              ||||||||||||||||||||||
Sbjct: 154712 atctgaagttctgaacatgcat 154733
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>ref|NM_129314.2| Arabidopsis thaliana acetylglucosaminyltransferase AT2G37585 mRNA,
           complete cds
          Length = 1391

 Score = 42.1 bits (21), Expect = 0.45
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 22  cgaggagacgaaatgtgagat 42
           |||||||||||||||||||||
Sbjct: 109 cgaggagacgaaatgtgagat 89
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>gb|AY142550.1| Arabidopsis thaliana clone RAFL08-11-L01 (R11180) mRNA sequence
          Length = 2348

 Score = 42.1 bits (21), Expect = 0.45
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 22  cgaggagacgaaatgtgagat 42
           |||||||||||||||||||||
Sbjct: 124 cgaggagacgaaatgtgagat 104
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>emb|BX324137.7| Zebrafish DNA sequence from clone CH211-42A2 in linkage group 1, complete
              sequence
          Length = 117484

 Score = 42.1 bits (21), Expect = 0.45
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 49     tgaagttctgaacatgcatca 69
              |||||||||||||||||||||
Sbjct: 116050 tgaagttctgaacatgcatca 116030
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>gb|AC004684.3| Arabidopsis thaliana chromosome 2 clone F13M22 map ve018, complete
             sequence
          Length = 93845

 Score = 42.1 bits (21), Expect = 0.45
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    cgaggagacgaaatgtgagat 42
             |||||||||||||||||||||
Sbjct: 21958 cgaggagacgaaatgtgagat 21938
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>gb|AY729579.1| Banana mild mosaic virus clone 12_4 RNA-dependent RNA polymerase
           (RdRp) gene, partial cds
          Length = 310

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  tcattgattattttctccat 102
           ||||||||||||||||||||
Sbjct: 66  tcattgattattttctccat 47
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>gb|AY729578.1| Banana mild mosaic virus clone 12_3 RNA-dependent RNA polymerase
           (RdRp) gene, partial cds
          Length = 310

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  tcattgattattttctccat 102
           ||||||||||||||||||||
Sbjct: 66  tcattgattattttctccat 47
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>gb|AY729577.1| Banana mild mosaic virus clone 12_2 RNA-dependent RNA polymerase
           (RdRp) gene, partial cds
          Length = 310

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  tcattgattattttctccat 102
           ||||||||||||||||||||
Sbjct: 66  tcattgattattttctccat 47
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>gb|AC144707.2| Danio rerio clone CH211-164N15, complete sequence
          Length = 149067

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     tcattgattattttctccat 102
              ||||||||||||||||||||
Sbjct: 139164 tcattgattattttctccat 139183
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>ref|XM_853362.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 12 (LOC480682), mRNA
          Length = 3024

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 32   aaatgtgagatgtgatctgaagtt 55
            |||||| |||||||||||||||||
Sbjct: 2632 aaatgtcagatgtgatctgaagtt 2655
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>ref|XM_853324.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 11 (LOC480682), mRNA
          Length = 3042

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 32   aaatgtgagatgtgatctgaagtt 55
            |||||| |||||||||||||||||
Sbjct: 2650 aaatgtcagatgtgatctgaagtt 2673
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>ref|XM_853284.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 10 (LOC480682), mRNA
          Length = 3030

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 32   aaatgtgagatgtgatctgaagtt 55
            |||||| |||||||||||||||||
Sbjct: 2638 aaatgtcagatgtgatctgaagtt 2661
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>ref|XM_537803.2| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 1 (LOC480682), mRNA
          Length = 3030

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 32   aaatgtgagatgtgatctgaagtt 55
            |||||| |||||||||||||||||
Sbjct: 2638 aaatgtcagatgtgatctgaagtt 2661
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>ref|XM_853206.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 9 (LOC480682), mRNA
          Length = 3039

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 32   aaatgtgagatgtgatctgaagtt 55
            |||||| |||||||||||||||||
Sbjct: 2647 aaatgtcagatgtgatctgaagtt 2670
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>ref|XM_853167.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 8 (LOC480682), mRNA
          Length = 3051

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 32   aaatgtgagatgtgatctgaagtt 55
            |||||| |||||||||||||||||
Sbjct: 2659 aaatgtcagatgtgatctgaagtt 2682
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>ref|XM_844124.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 2 (LOC480682), mRNA
          Length = 3006

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 32   aaatgtgagatgtgatctgaagtt 55
            |||||| |||||||||||||||||
Sbjct: 2614 aaatgtcagatgtgatctgaagtt 2637
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>ref|XM_853085.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 7 (LOC480682), mRNA
          Length = 2970

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 32   aaatgtgagatgtgatctgaagtt 55
            |||||| |||||||||||||||||
Sbjct: 2578 aaatgtcagatgtgatctgaagtt 2601
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>ref|XM_853045.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 6 (LOC480682), mRNA
          Length = 2985

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 32   aaatgtgagatgtgatctgaagtt 55
            |||||| |||||||||||||||||
Sbjct: 2593 aaatgtcagatgtgatctgaagtt 2616
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>ref|XM_853006.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 5 (LOC480682), mRNA
          Length = 2985

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 32   aaatgtgagatgtgatctgaagtt 55
            |||||| |||||||||||||||||
Sbjct: 2593 aaatgtcagatgtgatctgaagtt 2616
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>ref|XM_852961.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 4 (LOC480682), mRNA
          Length = 3072

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 32   aaatgtgagatgtgatctgaagtt 55
            |||||| |||||||||||||||||
Sbjct: 2680 aaatgtcagatgtgatctgaagtt 2703
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>ref|XM_852921.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 3 (LOC480682), mRNA
          Length = 3021

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 32   aaatgtgagatgtgatctgaagtt 55
            |||||| |||||||||||||||||
Sbjct: 2629 aaatgtcagatgtgatctgaagtt 2652
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>gb|AC128649.5| Homo sapiens 12 BAC RP11-728G4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167071

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    ttctccatatacactgctgc 114
             ||||||||||||||||||||
Sbjct: 73196 ttctccatatacactgctgc 73177
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>gb|AC128657.2| Homo sapiens 12 BAC RP11-1079J22 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 60001

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    ttctccatatacactgctgc 114
             ||||||||||||||||||||
Sbjct: 36169 ttctccatatacactgctgc 36188
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>gb|AC006161.3| Arabidopsis thaliana chromosome 2 clone T14A4 map mi310, complete
             sequence
          Length = 99761

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 47    tctgaagttctgaacatgcatcat 70
             |||||| |||||||||||||||||
Sbjct: 86844 tctgaacttctgaacatgcatcat 86821
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 47       tctgaagttctgaacatgca 66
                ||||||||||||||||||||
Sbjct: 17442743 tctgaagttctgaacatgca 17442724



 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 45       gatctgaagttctgaacat 63
                |||||||||||||||||||
Sbjct: 15474020 gatctgaagttctgaacat 15474002
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 42       tgtgatctgaagttctgaac 61
                ||||||||||||||||||||
Sbjct: 11322556 tgtgatctgaagttctgaac 11322575
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 43      gtgatctgaagttctgaaca 62
               ||||||||||||||||||||
Sbjct: 7793690 gtgatctgaagttctgaaca 7793671



 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 46       atctgaagttctgaacatg 64
                |||||||||||||||||||
Sbjct: 37647474 atctgaagttctgaacatg 37647492
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>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete
             sequence
          Length = 134058

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    tctgaagttctgaacatgca 66
             ||||||||||||||||||||
Sbjct: 71738 tctgaagttctgaacatgca 71719
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>dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0010K01
          Length = 144404

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    gtgatctgaagttctgaaca 62
             ||||||||||||||||||||
Sbjct: 96271 gtgatctgaagttctgaaca 96252
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>dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0656C04
          Length = 143411

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    tgtgatctgaagttctgaac 61
             ||||||||||||||||||||
Sbjct: 23067 tgtgatctgaagttctgaac 23086
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>gb|AC120854.15| Mus musculus chromosome 7, clone RP23-329B6, complete sequence
          Length = 205102

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     ctccatatacactgctgctg 116
              ||||||||||||||||||||
Sbjct: 118003 ctccatatacactgctgctg 117984
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>dbj|AK064969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B09, full
            insert sequence
          Length = 4008

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 42   tgtgatctgaagttctgaac 61
            ||||||||||||||||||||
Sbjct: 1649 tgtgatctgaagttctgaac 1630
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>emb|AL929206.6| Zebrafish DNA sequence from clone CH211-150E22 in linkage group 7,
            complete sequence
          Length = 153126

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   tcattgattattttctccat 102
            ||||||||||||||||||||
Sbjct: 6762 tcattgattattttctccat 6743
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 47       tctgaagttctgaacatgca 66
                ||||||||||||||||||||
Sbjct: 17451783 tctgaagttctgaacatgca 17451764



 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 45       gatctgaagttctgaacat 63
                |||||||||||||||||||
Sbjct: 15482261 gatctgaagttctgaacat 15482243
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>emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa0070E09 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 144084

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     gtgatctgaagttctgaaca 62
              ||||||||||||||||||||
Sbjct: 109969 gtgatctgaagttctgaaca 109988
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>gb|AY729600.1| Banana mild mosaic virus clone 95_1 RNA-dependent RNA polymerase
           (RdRp) gene, partial cds
          Length = 312

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 83  tcattgattattttctccatata 105
           |||||||||||||| ||||||||
Sbjct: 68  tcattgattattttttccatata 46
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>gb|AC161520.6| Mus musculus chromosome 7, clone RP24-282D19, complete sequence
          Length = 165232

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 116   ggtagtaggattacagaagctca 138
             ||||| |||||||||||||||||
Sbjct: 35959 ggtaggaggattacagaagctca 35937
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>gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1187_E11,
              complete sequence
          Length = 133352

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 49     tgaagttctgaacatgcat 67
              |||||||||||||||||||
Sbjct: 123846 tgaagttctgaacatgcat 123864
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>gb|BC073093.1| Xenopus laevis similar to zinc finger RNA binding protein, mRNA
           (cDNA clone MGC:83538 IMAGE:5078734), complete cds
          Length = 4798

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 108 ctgctgctggtagtaggat 126
           |||||||||||||||||||
Sbjct: 980 ctgctgctggtagtaggat 962
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>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09,
             complete sequence
          Length = 94399

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 49    tgaagttctgaacatgcat 67
             |||||||||||||||||||
Sbjct: 16425 tgaagttctgaacatgcat 16443
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>gb|BC042260.1| Xenopus laevis similar to zinc finger RNA binding protein, mRNA
           (cDNA clone IMAGE:5571544), partial cds
          Length = 2398

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 108 ctgctgctggtagtaggat 126
           |||||||||||||||||||
Sbjct: 967 ctgctgctggtagtaggat 949
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>gb|AC012626.10| Homo sapiens chromosome 16 clone CTD-2118O12, complete sequence
          Length = 149370

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 99    ccatatacactgctgctggtagt 121
             ||||||||||||||| |||||||
Sbjct: 66890 ccatatacactgctggtggtagt 66868
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>ref|XM_754325.1| Ustilago maydis 521 hypothetical protein (UM03271.1) partial mRNA
          Length = 2901

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 69   atgcagagccatgctcatt 87
            |||||||||||||||||||
Sbjct: 2272 atgcagagccatgctcatt 2254
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>ref|XM_756060.1| Ustilago maydis 521 hypothetical protein (UM05006.1) partial mRNA
          Length = 5757

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 67   tcatgcagagccatgctca 85
            |||||||||||||||||||
Sbjct: 2210 tcatgcagagccatgctca 2228
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>emb|CR538727.16| Zebrafish DNA sequence from clone DKEY-9G20 in linkage group 9,
            complete sequence
          Length = 155321

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 83   tcattgattattttctcca 101
            |||||||||||||||||||
Sbjct: 6162 tcattgattattttctcca 6144
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>gb|AC122809.4| Mus musculus BAC clone RP23-272E5 from chromosome 7, complete sequence
          Length = 205725

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 79     atgctcattgattattttc 97
              |||||||||||||||||||
Sbjct: 134791 atgctcattgattattttc 134809
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>emb|AL450327.12| Human DNA sequence from clone RP11-173D14 on chromosome 6 Contains part
              of a novel gene,  a gene for a novel protein (likely
              ortholog of mouse putative IKK regulator SIMPL), the 3'end
              of a gene for a novel WD repeat-containing protein and a
              CpG island, complete sequence
          Length = 174304

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 102    tatacactgctgctggtag 120
              |||||||||||||||||||
Sbjct: 157496 tatacactgctgctggtag 157514
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>gb|AC108924.5| Homo sapiens chromosome 8, clone RP11-1113C19, complete sequence
          Length = 125488

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 87    tgattattttctccatata 105
             |||||||||||||||||||
Sbjct: 69393 tgattattttctccatata 69375
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>gb|AC153837.4| Mus musculus 6 BAC RP23-192D5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 232039

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 90     ttattttctccatatacac 108
              |||||||||||||||||||
Sbjct: 181798 ttattttctccatatacac 181780
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>emb|BX247888.10| Zebrafish DNA sequence from clone DKEY-10D15 in linkage group 9, complete
              sequence
          Length = 223425

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 83     tcattgattattttctcca 101
              |||||||||||||||||||
Sbjct: 177576 tcattgattattttctcca 177558
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>gb|AC073391.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             nbeb0015F09b, complete sequence
          Length = 108964

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 45    gatctgaagttctgaacat 63
             |||||||||||||||||||
Sbjct: 57366 gatctgaagttctgaacat 57348
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>ref|XM_692780.1| PREDICTED: Danio rerio similar to contactin 4 isoform a precursor
           (LOC569397), mRNA
          Length = 813

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 98  tccatatacactgctgctg 116
           |||||||||||||||||||
Sbjct: 603 tccatatacactgctgctg 585
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>gb|AC025656.7| Homo sapiens chromosome 18, clone RP11-36L19, complete sequence
          Length = 193351

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    atgtgatctgaagttctga 59
             |||||||||||||||||||
Sbjct: 40635 atgtgatctgaagttctga 40653
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>ref|NM_069787.2| Caenorhabditis elegans Y24F12A.1 (Y24F12A.1) mRNA, complete cds
          Length = 1432

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 83  tcattgattattttctcca 101
           |||||||||||||||||||
Sbjct: 389 tcattgattattttctcca 407
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 46       atctgaagttctgaacatg 64
                |||||||||||||||||||
Sbjct: 26391332 atctgaagttctgaacatg 26391350
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>gb|AC040173.5| Homo sapiens chromosome 16 clone RP11-65J21, complete sequence
          Length = 192971

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 99     ccatatacactgctgctggtagt 121
              ||||||||||||||| |||||||
Sbjct: 154916 ccatatacactgctggtggtagt 154894
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 44       tgatctgaagttctgaaca 62
                |||||||||||||||||||
Sbjct: 28479619 tgatctgaagttctgaaca 28479601
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 49       tgaagttctgaacatgcat 67
                |||||||||||||||||||
Sbjct: 26099085 tgaagttctgaacatgcat 26099103
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>gb|AC007719.7|AC007719 Homo sapiens chromosome , clone RP11-3A12, complete sequence
          Length = 150831

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 92     attttctccatatacactg 110
              |||||||||||||||||||
Sbjct: 127506 attttctccatatacactg 127524
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>gb|AC093798.3| Homo sapiens BAC clone RP11-306N14 from 2, complete sequence
          Length = 233877

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 93    ttttctccatatacactgc 111
             |||||||||||||||||||
Sbjct: 52955 ttttctccatatacactgc 52937
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>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0677H08
          Length = 178830

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 46     atctgaagttctgaacatg 64
              |||||||||||||||||||
Sbjct: 107948 atctgaagttctgaacatg 107966
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>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0532H03
          Length = 166128

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 44    tgatctgaagttctgaaca 62
             |||||||||||||||||||
Sbjct: 86652 tgatctgaagttctgaaca 86634
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>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1789_C07
          Length = 138944

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 46    atctgaagttctgaacatg 64
             |||||||||||||||||||
Sbjct: 40884 atctgaagttctgaacatg 40902
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>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1770_H02
          Length = 170648

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 46     atctgaagttctgaacatg 64
              |||||||||||||||||||
Sbjct: 120913 atctgaagttctgaacatg 120931
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>dbj|AK099470.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023O14, full
            insert sequence
          Length = 2549

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 46   atctgaagttctgaacatg 64
            |||||||||||||||||||
Sbjct: 2383 atctgaagttctgaacatg 2401
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>dbj|AK099469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023O13, full
            insert sequence
          Length = 2549

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 46   atctgaagttctgaacatg 64
            |||||||||||||||||||
Sbjct: 2383 atctgaagttctgaacatg 2401
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>emb|AL844885.4| Mouse DNA sequence from clone RP23-226E14 on chromosome 2, complete
              sequence
          Length = 129810

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      actacagccatgaaggtct 20
              |||||||||||||||||||
Sbjct: 122950 actacagccatgaaggtct 122968
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>dbj|AK062271.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-A07, full
            insert sequence
          Length = 1704

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 46   atctgaagttctgaacatg 64
            |||||||||||||||||||
Sbjct: 1634 atctgaagttctgaacatg 1652
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>gb|AC006221.1|AC006221 Homo sapiens chromosome 18, clone hRPK.142_O_10, complete sequence
          Length = 79085

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    atgtgatctgaagttctga 59
             |||||||||||||||||||
Sbjct: 13393 atgtgatctgaagttctga 13411
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>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome
          Length = 1664970

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 86     ttgattattttctccatat 104
              |||||||||||||||||||
Sbjct: 105536 ttgattattttctccatat 105518
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>gb|AC151572.2| Mus musculus BAC clone RP23-388I22 from 1, complete sequence
          Length = 187409

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 79    atgctcattgattattttc 97
             |||||||||||||||||||
Sbjct: 72746 atgctcattgattattttc 72764
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>gb|AC132305.3| Mus musculus BAC clone RP24-286A19 from 6, complete sequence
          Length = 187465

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 90   ttattttctccatatacac 108
            |||||||||||||||||||
Sbjct: 7013 ttattttctccatatacac 6995
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>gb|AC162175.10| Mus musculus chromosome 7, clone RP23-327E18, complete sequence
          Length = 224178

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 116   ggtagtaggattacagaagctca 138
             ||||| |||||||||||||||||
Sbjct: 11668 ggtaggaggattacagaagctca 11690
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>dbj|AP004287.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1471H7
          Length = 172543

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 87    tgattattttctccatata 105
             |||||||||||||||||||
Sbjct: 74039 tgattattttctccatata 74021


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,604,839
Number of Sequences: 3902068
Number of extensions: 1604839
Number of successful extensions: 108659
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108093
Number of HSP's gapped (non-prelim): 566
length of query: 147
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 126
effective length of database: 17,151,101,840
effective search space: 2161038831840
effective search space used: 2161038831840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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