>CDC16_YEAST (P09798) Anaphase-promoting complex subunit CDC16 (Cell division|
           control protein 16)
          Length = 840

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 20/63 (31%), Positives = 27/63 (42%)
 Frame = +3

Query: 12  HCTSVNLIFLTCYPKSGRCTSNHPRSTNTC*YYVSTPVNQYSDHSTARNISPFHNGIPPL 191
           HC  V     T Y KS + TSN   S         +P  Q+S H++    SPF + +   
Sbjct: 9   HCYIVICGKATHYYKSSKATSNLKSSNRVLMRNPMSPSEQHSQHNSTLAASPFVSNVSAA 68

Query: 192 RQQ 200
           R Q
Sbjct: 69  RTQ 71

>NPD_THET8 (Q5SIH7) NAD-dependent deacetylase (EC 3.5.1.-) (Regulatory protein|
           SIR2 homolog)
          Length = 254

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 34  SFLLVTQRVDGVHRITHAQQI 96
           SFLLVTQ VDG+H +  +Q +
Sbjct: 98  SFLLVTQNVDGLHALAGSQNL 118

>MTFA_SHISS (Q3YY51) Putative RNA 2'-O-ribose methyltransferase mtfA (EC|
           2.1.1.-)
          Length = 366

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 132 YSDHSTARNISPFHNGIPPLRQQAQAHRR 218
           Y+ +S + N SPF+ GIP L+  A+A  R
Sbjct: 159 YTGYSYSNNNSPFYMGIPRLKFPAEAPSR 187

>MTFA_SHIFL (Q83JW6) Putative RNA 2'-O-ribose methyltransferase mtfA (EC|
           2.1.1.-)
          Length = 366

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 132 YSDHSTARNISPFHNGIPPLRQQAQAHRR 218
           Y+ +S + N SPF+ GIP L+  A+A  R
Sbjct: 159 YTGYSYSNNNSPFYMGIPRLKFPAEAPSR 187

>PEPDB_STRP8 (Q8NZ57) Probable dipeptidase B (EC 3.4.-.-)|
          Length = 499

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 111 VSTPVNQYSDHSTARNISPFHNGIPPLRQQAQAHRRRPFGEKAVDLLSGVER 266
           +S     Y + ST  N   ++  +  +     AH + PFG K +D + G+E+
Sbjct: 385 ISRTYEAYQEKSTQYNDKSWYWTVSHINDLVAAHPK-PFGTKVIDEMKGLEK 435

>PEPDB_STRP6 (Q5X9M0) Probable dipeptidase B (EC 3.4.-.-)|
          Length = 499

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 111 VSTPVNQYSDHSTARNISPFHNGIPPLRQQAQAHRRRPFGEKAVDLLSGVER 266
           +S     Y + ST  N   ++  +  +     AH + PFG K +D + G+E+
Sbjct: 385 ISRTYEAYQEKSTQYNDKSWYWTVSHINDLVAAHPK-PFGTKVIDEIKGLEK 435

>PEPDB_STRP3 (Q8K5M7) Probable dipeptidase B (EC 3.4.-.-)|
          Length = 499

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 111 VSTPVNQYSDHSTARNISPFHNGIPPLRQQAQAHRRRPFGEKAVDLLSGVER 266
           +S     Y + ST  N   ++  +  +     AH + PFG K +D + G+E+
Sbjct: 385 ISRTYEAYQEKSTQYNDKSWYWTVSHINDLVAAHPK-PFGTKVIDEMKGLEK 435

>PEPDB_STRP1 (Q99XS1) Probable dipeptidase B (EC 3.4.-.-)|
          Length = 498

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 111 VSTPVNQYSDHSTARNISPFHNGIPPLRQQAQAHRRRPFGEKAVDLLSGVER 266
           +S     Y + ST  N   ++  +  +     AH + PFG K +D + G+E+
Sbjct: 384 ISRTYEAYQEKSTQYNDKSWYWTVSHINDLVAAHPK-PFGTKVIDEMKGLEK 434

>EX7S_GLUOX (Q5FUB3) Probable exodeoxyribonuclease VII small subunit (EC|
           3.1.11.6) (Exonuclease VII small subunit)
          Length = 83

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -2

Query: 219 DGGELELVDVGAGSRYEKGICCEQYCDRSIG 127
           +GG+++L D  A S YE+G    ++CD  +G
Sbjct: 25  EGGQMKLED--AISAYERGAALRRHCDAKLG 53


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,002,920
Number of Sequences: 219361
Number of extensions: 742041
Number of successful extensions: 1853
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1853
length of database: 80,573,946
effective HSP length: 64
effective length of database: 66,534,842
effective search space used: 1596836208
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)