ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet11c10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | VGLB_HHV2H (P08666) Glycoprotein B precursor | 28 | 4.9 | 2 | VGLB_HHV23 (P06763) Glycoprotein B precursor | 28 | 4.9 | 3 | VGLB_HHV1P (P08665) Glycoprotein B precursor | 28 | 4.9 | 4 | VGLB_HHV1K (P06437) Glycoprotein B precursor | 28 | 4.9 | 5 | VGLB_HHV11 (P10211) Glycoprotein B precursor | 28 | 4.9 | 6 | SULX_YEAST (P53394) Putative sulfate transporter YPR003C | 28 | 4.9 | 7 | VGLB_HHV1F (P06436) Glycoprotein B precursor | 28 | 4.9 |
|---|
>VGLB_HHV2H (P08666) Glycoprotein B precursor| Length = 904 Score = 28.5 bits (62), Expect = 4.9 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 134 SSRPGYCYSE*TISFRWFAASAPMSVLFGEN 42 SSRPG CYS +SFR+ + GEN Sbjct: 587 SSRPGTCYSRPLVSFRYEDQGPLIEGQLGEN 617
>VGLB_HHV23 (P06763) Glycoprotein B precursor| Length = 904 Score = 28.5 bits (62), Expect = 4.9 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 134 SSRPGYCYSE*TISFRWFAASAPMSVLFGEN 42 SSRPG CYS +SFR+ + GEN Sbjct: 587 SSRPGTCYSRPLVSFRYEDQGPLIEGQLGEN 617
>VGLB_HHV1P (P08665) Glycoprotein B precursor| Length = 904 Score = 28.5 bits (62), Expect = 4.9 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 134 SSRPGYCYSE*TISFRWFAASAPMSVLFGEN 42 SSRPG CYS +SFR+ + GEN Sbjct: 590 SSRPGACYSRPLVSFRYEDQGPLVEGQLGEN 620
>VGLB_HHV1K (P06437) Glycoprotein B precursor| Length = 904 Score = 28.5 bits (62), Expect = 4.9 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 134 SSRPGYCYSE*TISFRWFAASAPMSVLFGEN 42 SSRPG CYS +SFR+ + GEN Sbjct: 590 SSRPGACYSRPLVSFRYEDQGPLVEGQLGEN 620
>VGLB_HHV11 (P10211) Glycoprotein B precursor| Length = 904 Score = 28.5 bits (62), Expect = 4.9 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 134 SSRPGYCYSE*TISFRWFAASAPMSVLFGEN 42 SSRPG CYS +SFR+ + GEN Sbjct: 590 SSRPGACYSRPLVSFRYEDQGPLVEGQLGEN 620
>SULX_YEAST (P53394) Putative sulfate transporter YPR003C| Length = 754 Score = 28.5 bits (62), Expect = 4.9 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +2 Query: 113 NNSLAGCFTVTKTTNGSQNEFHRRNSDS 196 NNS +GC T TN + N + N+DS Sbjct: 64 NNSRSGCTNNTNNTNNTSNTSNTNNNDS 91
>VGLB_HHV1F (P06436) Glycoprotein B precursor| Length = 903 Score = 28.5 bits (62), Expect = 4.9 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 134 SSRPGYCYSE*TISFRWFAASAPMSVLFGEN 42 SSRPG CYS +SFR+ + GEN Sbjct: 589 SSRPGACYSRPLVSFRYEDQGPLVEGQLGEN 619 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,490,205 Number of Sequences: 219361 Number of extensions: 434211 Number of successful extensions: 1056 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1044 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1056 length of database: 80,573,946 effective HSP length: 50 effective length of database: 69,605,896 effective search space used: 1670541504 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
