ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet11a03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransgly... 119 3e-24
2gb|AY023463.1| Oryza sativa microsatellite MRG5788 containing (T... 56 4e-05
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 56 4e-05
4dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 56 4e-05
5dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 4e-05
6gb|AF108925.1|AF108925 Mercenaria mercenaria microsatellite Mme2... 46 0.040
7emb|CR391965.8| Zebrafish DNA sequence from clone CH211-124O16 i... 42 0.62
8gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence 40 2.4
9gb|AC121299.16| Mus musculus chromosome 17, clone RP23-402P8, co... 40 2.4
10emb|AL365400.19| Human DNA sequence from clone RP11-471G13 on ch... 40 2.4
11emb|AL109755.14|HSJ340H11 Human DNA sequence from clone RP3-340H... 40 2.4
12gb|BC059359.1| Homo sapiens hydatidiform mole associated and imp... 40 2.4
13emb|BX927294.7| Zebrafish DNA sequence from clone CH211-222I16 i... 40 2.4
14ref|NM_006718.2| Homo sapiens pleiomorphic adenoma gene-like 1 (... 40 2.4
15ref|NM_002656.2| Homo sapiens pleiomorphic adenoma gene-like 1 (... 40 2.4
16emb|BX571829.7| Zebrafish DNA sequence from clone DKEY-256M7 in ... 40 2.4
17dbj|AK096331.1| Homo sapiens cDNA FLJ39012 fis, clone NT2RP60000... 40 2.4
18gb|AF484581.1| Homo sapiens clone 3-4 Wilms tumor CpG island seq... 40 2.4
19ref|NR_002768.1| Homo sapiens hydatidiform mole associated and i... 40 2.4
20gb|AC092360.2| Homo sapiens chromosome 5 clone RP11-346B2, compl... 40 2.4
21ref|XM_945058.1| PREDICTED: Homo sapiens similar to hydatidiform... 40 2.4
22ref|XM_933027.1| PREDICTED: Homo sapiens similar to hydatidiform... 40 2.4
23emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in l... 40 2.4
24dbj|AB052172.1| Macaca fascicularis brain cDNA, clone:QccE-18211... 40 2.4
25gb|U72621.4|HSU72621 Homo sapiens lost on transformation LOT1 mR... 40 2.4
26gb|AF241534.1|AF241534 Homo sapiens hydatidiform mole associated... 40 2.4
27emb|AJ311395.1|HSA311395 Homo sapiens mRNA for zinc finger prote... 40 2.4
28gb|AY106262.1| Zea mays PCO111648 mRNA sequence 40 2.4
29gb|AY103775.1| Zea mays PCO076979 mRNA sequence 40 2.4
30emb|AL929082.7| Zebrafish DNA sequence from clone CH211-113P18, ... 40 2.4
31gb|BC086616.1| Mus musculus cDNA clone IMAGE:5719021 38 9.7
32gb|AC155164.5| Mus musculus BAC clone RP24-74L7 from chromosome ... 38 9.7
33gb|BC082282.1| Mus musculus cDNA clone IMAGE:30292875, partial cds 38 9.7
34gb|AC007928.7| Drosophila melanogaster clone BACR04O02, complete... 38 9.7
35gb|AC121500.6| Mus musculus chromosome 5, clone RP23-471H10, com... 38 9.7
36gb|AC117826.10| Mus musculus chromosome 1, clone RP24-81K19, com... 38 9.7
37ref|NM_133362.1| Mus musculus erythroid differentiation regulato... 38 9.7
38gb|AC146504.2| Danio rerio clone CH211-86L16, complete sequence 38 9.7
39gb|AC004691.1| Homo sapiens PAC clone RP4-740D2 from 7, complete... 38 9.7
40ref|XM_847541.1| PREDICTED: Canis familiaris similar to ring fin... 38 9.7
41gb|AC113203.10| Mus musculus chromosome 5, clone RP23-276C23, co... 38 9.7
42gb|AC084387.1| Mus musculus BAC clone RP23-93H2 from 7, complete... 38 9.7
43emb|CR854897.8| Zebrafish DNA sequence from clone DKEY-121N8 in ... 38 9.7
44gb|AC109610.25| Mus musculus strain C57BL/6J clone rp23-305g19 m... 38 9.7
45gb|BC048867.1| Mus musculus mRNA similar to ES cell derived home... 38 9.7
46emb|CR381612.5| Zebrafish DNA sequence from clone DKEY-274K7, co... 38 9.7
47emb|AL354707.17| Human DNA sequence from clone RP11-390F4 on chr... 38 9.7
48emb|BX571659.1| Wolinella succinogenes, complete genome; segment... 38 9.7
49emb|CR387924.6| Zebrafish DNA sequence from clone CH211-259A19 i... 38 9.7
50gb|AC162943.2| Mus musculus BAC clone RP23-76K9 from chromosome ... 38 9.7
51emb|CR536618.8| Mouse DNA sequence from clone RP24-143B12 on chr... 38 9.7
52emb|CR524481.5| Zebrafish DNA sequence from clone CH211-81C11 in... 38 9.7
53tpg|BK002614.1| TPA: TPA_inf: Drosophila melanogaster HDC14137 (... 38 9.7
54emb|AJ539223.1|MMU539223 Mus musculus mRNA for erythroid differe... 38 9.7
55emb|AJ007909.1|MMU7909 Mus musculus mRNA for erythroid different... 38 9.7
56emb|BX119977.10| Zebrafish DNA sequence from clone CH211-198A3 i... 38 9.7
57dbj|AK051407.1| Mus musculus 12 days embryo spinal ganglion cDNA... 38 9.7
58emb|BX539340.7| Zebrafish DNA sequence from clone DKEY-57K2 in l... 38 9.7
59emb|BX088536.8| Zebrafish DNA sequence from clone CH211-186M20 i... 38 9.7
60emb|BX324188.7| Zebrafish DNA sequence from clone DKEY-85A20 in ... 38 9.7
61emb|BX784022.6| Zebrafish DNA sequence from clone CH211-152C8 in... 38 9.7
62gb|AC007804.6|AC007804 Drosophila melanogaster, chromosome 3R, r... 38 9.7
63gb|BC058113.1| Mus musculus erythroid differentiation regulator ... 38 9.7
64gb|AC154794.2| Mus musculus BAC clone RP24-485J1 from 16, comple... 38 9.7
65gb|BC080795.1| Mus musculus erythroid differentiation regulator ... 38 9.7
66gb|BC018296.1| Mus musculus erythroid differentiation regulator ... 38 9.7
67gb|AY108018.1| Zea mays PCO079082 mRNA sequence 38 9.7
68gb|AE003718.3| Drosophila melanogaster chromosome 3R, section 56... 38 9.7
69gb|AE003705.3| Drosophila melanogaster chromosome 3R, section 43... 38 9.7
70gb|AC164611.3| Mus musculus BAC clone RP23-421C2 from chromosome... 38 9.7
71emb|CT025753.11| Mouse DNA sequence from clone RP24-340F12 on ch... 38 9.7
72gb|CP000224.1| Drosophila melanogaster genomic scaffold 21100002... 38 9.7
73emb|CT009575.8| Mouse DNA sequence from clone RP23-107N17 on chr... 38 9.7
74emb|AL844193.6| Zebrafish DNA sequence from clone DKEY-28J3, com... 38 9.7
75emb|AL390798.3|CNS06C7P Human chromosome 14 DNA sequence BAC R-2... 38 9.7
76gb|AY552846.1| Meleagris gallopavo clone MNT-274 microsatellite ... 38 9.7 
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA)
          Length = 1174

 Score =  119 bits (60), Expect = 3e-24
 Identities = 93/104 (89%), Gaps = 5/104 (4%)
 Strand = Plus / Minus

                                                                        
Query: 36   cttatttatcatacag-----tacagacgcttccatcttccctatctccggtcatcttcc 90
            ||||||||||||||||     |||||||||  ||||||||||||||||||| | ||||||
Sbjct: 1046 cttatttatcatacagtacaatacagacgcccccatcttccctatctccggccgtcttcc 987

                                                        
Query: 91   tccggcgatcgacgtatacacgggctgtccaatgctaccttgct 134
            ||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 986  tccggcgatcgacgtatacacggacggtccaatgctaccttgct 943



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                         
Query: 157 actacatggagcactcggcggggacgccct 186
           ||||||||||||||||||||||||||||||
Sbjct: 928 actacatggagcactcggcggggacgccct 899
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>gb|AY023463.1| Oryza sativa microsatellite MRG5788 containing (TCG)X8, closest to
           marker R11, genomic sequence
          Length = 224

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 160 acatggagcactcggcggggacgccctg 187
           ||||||||||||||||||||||||||||
Sbjct: 82  acatggagcactcggcggggacgccctg 55
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                            
Query: 160      acatggagcactcggcggggacgccctg 187
                ||||||||||||||||||||||||||||
Sbjct: 28773068 acatggagcactcggcggggacgccctg 28773095
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>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0028E05
          Length = 157631

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                         
Query: 160   acatggagcactcggcggggacgccctg 187
             ||||||||||||||||||||||||||||
Sbjct: 80843 acatggagcactcggcggggacgccctg 80870
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>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full
           insert sequence
          Length = 1253

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 160 acatggagcactcggcggggacgccctg 187
           ||||||||||||||||||||||||||||
Sbjct: 989 acatggagcactcggcggggacgccctg 962
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>gb|AF108925.1|AF108925 Mercenaria mercenaria microsatellite Mme277 sequence
          Length = 813

 Score = 46.1 bits (23), Expect = 0.040
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 135 ggacggacggacggacaagggca 157
           |||||||||||||||||||||||
Sbjct: 625 ggacggacggacggacaagggca 647
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>emb|CR391965.8| Zebrafish DNA sequence from clone CH211-124O16 in linkage group 24,
              complete sequence
          Length = 157418

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 19     tatcccccacaccagtactta 39
              |||||||||||||||||||||
Sbjct: 150615 tatcccccacaccagtactta 150635
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>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence
          Length = 781

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 164 ggagcactcggcggggacgccctg 187
           ||||||||||||||||| ||||||
Sbjct: 503 ggagcactcggcggggaagccctg 480
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>gb|AC121299.16| Mus musculus chromosome 17, clone RP23-402P8, complete sequence
          Length = 217287

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    gctggacggacggacggaca 151
              ||||||||||||||||||||
Sbjct: 143725 gctggacggacggacggaca 143744
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>emb|AL365400.19| Human DNA sequence from clone RP11-471G13 on chromosome Xq21.32-22.1
             Contains a novel pseudogene,  a heterogeneous nuclear
             ribonucleoprotein D-like (HNRPDL) pseudogene and a
             ribosomal protein S7 (RPS7) pseudogene, complete sequence
          Length = 176391

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   tgtccaatgctaccttgctg 135
             ||||||||||||||||||||
Sbjct: 24129 tgtccaatgctaccttgctg 24148
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>emb|AL109755.14|HSJ340H11 Human DNA sequence from clone RP3-340H11 on chromosome 6q24.1-24.3
             Contains part of the PLAGL1 gene for pleiomorphic adenoma
             gene-like 1 (PLAG-like 1, LOT1, ZAC, ZAC tumor suppressor)
             and an FK506 binding protein 7 (FKBP7) pseudogene.
             Contains a a CpG island, complete sequence
          Length = 89669

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   tgctggacggacggacggac 150
             ||||||||||||||||||||
Sbjct: 52906 tgctggacggacggacggac 52887
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>gb|BC059359.1| Homo sapiens hydatidiform mole associated and imprinted, mRNA (cDNA
           clone IMAGE:30330800)
          Length = 3349

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 tgctggacggacggacggac 150
           ||||||||||||||||||||
Sbjct: 21  tgctggacggacggacggac 40
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>emb|BX927294.7| Zebrafish DNA sequence from clone CH211-222I16 in linkage group 13,
             complete sequence
          Length = 104811

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   tggacggacggacggacaag 153
             ||||||||||||||||||||
Sbjct: 27299 tggacggacggacggacaag 27280
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>ref|NM_006718.2| Homo sapiens pleiomorphic adenoma gene-like 1 (PLAGL1), transcript
           variant 2, mRNA
          Length = 4816

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 tgctggacggacggacggac 150
           ||||||||||||||||||||
Sbjct: 175 tgctggacggacggacggac 194
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>ref|NM_002656.2| Homo sapiens pleiomorphic adenoma gene-like 1 (PLAGL1), transcript
           variant 1, mRNA
          Length = 4354

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 tgctggacggacggacggac 150
           ||||||||||||||||||||
Sbjct: 175 tgctggacggacggacggac 194
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>emb|BX571829.7| Zebrafish DNA sequence from clone DKEY-256M7 in linkage group 12,
              complete sequence
          Length = 196942

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      cggctacatttcaccttatc 22
              ||||||||||||||||||||
Sbjct: 174524 cggctacatttcaccttatc 174505
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>dbj|AK096331.1| Homo sapiens cDNA FLJ39012 fis, clone NT2RP6000077, highly similar
           to Homo sapiens mRNA for ZAC zinc finger protein
          Length = 3215

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 tgctggacggacggacggac 150
           ||||||||||||||||||||
Sbjct: 143 tgctggacggacggacggac 162
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>gb|AF484581.1| Homo sapiens clone 3-4 Wilms tumor CpG island sequence
          Length = 428

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 tgctggacggacggacggac 150
           ||||||||||||||||||||
Sbjct: 185 tgctggacggacggacggac 204
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>ref|NR_002768.1| Homo sapiens hydatidiform mole associated and imprinted (HYMAI) on
           chromosome 6
          Length = 5005

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 tgctggacggacggacggac 150
           ||||||||||||||||||||
Sbjct: 489 tgctggacggacggacggac 508
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>gb|AC092360.2| Homo sapiens chromosome 5 clone RP11-346B2, complete sequence
          Length = 130737

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     caccagtacttatttatcat 47
              ||||||||||||||||||||
Sbjct: 116528 caccagtacttatttatcat 116547
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>ref|XM_945058.1| PREDICTED: Homo sapiens similar to hydatidiform mole associated and
           imprinted (LOC651977), mRNA
          Length = 3335

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 tgctggacggacggacggac 150
           ||||||||||||||||||||
Sbjct: 15  tgctggacggacggacggac 34
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>ref|XM_933027.1| PREDICTED: Homo sapiens similar to hydatidiform mole associated and
           imprinted (LOC645648), mRNA
          Length = 3335

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 tgctggacggacggacggac 150
           ||||||||||||||||||||
Sbjct: 15  tgctggacggacggacggac 34
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>emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in linkage group 24,
             complete sequence
          Length = 213917

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   tggacggacggacggacaag 153
             ||||||||||||||||||||
Sbjct: 89560 tggacggacggacggacaag 89541
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>dbj|AB052172.1| Macaca fascicularis brain cDNA, clone:QccE-18211, similar to human
           hypothetical protein FLJ143145, mRNA, AK125135
          Length = 3890

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 48  acagtacagacgcttccatcttcc 71
           |||||||||||| |||||||||||
Sbjct: 790 acagtacagacggttccatcttcc 813
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>gb|U72621.4|HSU72621 Homo sapiens lost on transformation LOT1 mRNA, complete cds
          Length = 4833

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 tgctggacggacggacggac 150
           ||||||||||||||||||||
Sbjct: 175 tgctggacggacggacggac 194
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>gb|AF241534.1|AF241534 Homo sapiens hydatidiform mole associated and imprinted (HYMAI)
           mRNA, complete sequence
          Length = 5005

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 tgctggacggacggacggac 150
           ||||||||||||||||||||
Sbjct: 489 tgctggacggacggacggac 508
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>emb|AJ311395.1|HSA311395 Homo sapiens mRNA for zinc finger protein (ZAC gene), long 5'UTR
           splice variant
          Length = 3663

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 tgctggacggacggacggac 150
           ||||||||||||||||||||
Sbjct: 165 tgctggacggacggacggac 184
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>gb|AY106262.1| Zea mays PCO111648 mRNA sequence
          Length = 1257

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 164 ggagcactcggcggggacgccctg 187
           ||||||||||||||||| ||||||
Sbjct: 981 ggagcactcggcggggaagccctg 958
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>gb|AY103775.1| Zea mays PCO076979 mRNA sequence
          Length = 1495

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 161  catggagcactcggcgggga 180
            ||||||||||||||||||||
Sbjct: 1027 catggagcactcggcgggga 1008
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>emb|AL929082.7| Zebrafish DNA sequence from clone CH211-113P18, complete sequence
          Length = 195316

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   gctggacggacggacggaca 151
             ||||||||||||||||||||
Sbjct: 17026 gctggacggacggacggaca 17045
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>gb|BC086616.1| Mus musculus cDNA clone IMAGE:5719021
          Length = 3331

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 132  gctggacggacggacggac 150
            |||||||||||||||||||
Sbjct: 3147 gctggacggacggacggac 3165
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>gb|AC155164.5| Mus musculus BAC clone RP24-74L7 from chromosome 8, complete sequence
          Length = 193057

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 135   ggacggacggacggacaag 153
             |||||||||||||||||||
Sbjct: 52692 ggacggacggacggacaag 52710
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>gb|BC082282.1| Mus musculus cDNA clone IMAGE:30292875, partial cds
          Length = 830

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 132 gctggacggacggacggac 150
           |||||||||||||||||||
Sbjct: 458 gctggacggacggacggac 476
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>gb|AC007928.7| Drosophila melanogaster clone BACR04O02, complete sequence
          Length = 176395

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 135   ggacggacggacggacaag 153
             |||||||||||||||||||
Sbjct: 62699 ggacggacggacggacaag 62681
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>gb|AC121500.6| Mus musculus chromosome 5, clone RP23-471H10, complete sequence
          Length = 179337

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 134    tggacggacggacggacaa 152
              |||||||||||||||||||
Sbjct: 112600 tggacggacggacggacaa 112618
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>gb|AC117826.10| Mus musculus chromosome 1, clone RP24-81K19, complete sequence
          Length = 227953

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 162   atggagcactcggcgggga 180
             |||||||||||||||||||
Sbjct: 78218 atggagcactcggcgggga 78200
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>ref|NM_133362.1| Mus musculus erythroid differentiation regulator 1 (Erdr1), mRNA
          Length = 801

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 132 gctggacggacggacggac 150
           |||||||||||||||||||
Sbjct: 511 gctggacggacggacggac 529
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>gb|AC146504.2| Danio rerio clone CH211-86L16, complete sequence
          Length = 181948

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 134   tggacggacggacggacaa 152
             |||||||||||||||||||
Sbjct: 93130 tggacggacggacggacaa 93112
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>gb|AC004691.1| Homo sapiens PAC clone RP4-740D2 from 7, complete sequence
          Length = 141990

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 134    tggacggacggacggacaa 152
              |||||||||||||||||||
Sbjct: 112696 tggacggacggacggacaa 112678
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>ref|XM_847541.1| PREDICTED: Canis familiaris similar to ring finger protein 185,
           transcript variant 2 (LOC486362), mRNA
          Length = 829

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 135 ggacggacggacggacaag 153
           |||||||||||||||||||
Sbjct: 44  ggacggacggacggacaag 62
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>gb|AC113203.10| Mus musculus chromosome 5, clone RP23-276C23, complete sequence
          Length = 201674

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 134    tggacggacggacggacaa 152
              |||||||||||||||||||
Sbjct: 191716 tggacggacggacggacaa 191698
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>gb|AC084387.1| Mus musculus BAC clone RP23-93H2 from 7, complete sequence
          Length = 175948

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 61    ttccatcttccctatctcc 79
             |||||||||||||||||||
Sbjct: 63629 ttccatcttccctatctcc 63647
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>emb|CR854897.8| Zebrafish DNA sequence from clone DKEY-121N8 in linkage group 15,
              complete sequence
          Length = 185286

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 134    tggacggacggacggacaa 152
              |||||||||||||||||||
Sbjct: 183743 tggacggacggacggacaa 183725
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>gb|AC109610.25| Mus musculus strain C57BL/6J clone rp23-305g19 map 17, complete
           sequence
          Length = 194366

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 61  ttccatcttccctatctcc 79
           |||||||||||||||||||
Sbjct: 515 ttccatcttccctatctcc 497
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>gb|BC048867.1| Mus musculus mRNA similar to ES cell derived homeobox (cDNA clone
            IMAGE:5388347)
          Length = 2501

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 132  gctggacggacggacggac 150
            |||||||||||||||||||
Sbjct: 2336 gctggacggacggacggac 2354
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>emb|CR381612.5| Zebrafish DNA sequence from clone DKEY-274K7, complete sequence
          Length = 96276

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 134   tggacggacggacggacaa 152
             |||||||||||||||||||
Sbjct: 25377 tggacggacggacggacaa 25395
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>emb|AL354707.17| Human DNA sequence from clone RP11-390F4 on chromosome 9 Contains the 5'
              end of a ring finger protein 2 (RNF2) pseudogene, the 3'
              end of a novel gene, a 60S ribosomal protein L35a (RPL35A)
              pseudogene, three novel genes, a gene similar to small
              nuclear ribonucleoprotein polypeptide E (SNRPE), the 5' end
              of the JMJD2C gene for jumonji domain containing 2C, a
              chromosome 20 open reading frame 45 (C20orf45) pseudogene
              and six CpG islands, complete sequence
          Length = 170970

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 17     cttatcccccacaccagta 35
              |||||||||||||||||||
Sbjct: 151123 cttatcccccacaccagta 151141
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>emb|BX571659.1| Wolinella succinogenes, complete genome; segment 3/7
          Length = 349970

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 119    ccaatgctaccttgctggacgga 141
              |||| ||||||||||||||||||
Sbjct: 218436 ccaaagctaccttgctggacgga 218458
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>emb|CR387924.6| Zebrafish DNA sequence from clone CH211-259A19 in linkage group 1,
            complete sequence
          Length = 68126

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 134  tggacggacggacggacaa 152
            |||||||||||||||||||
Sbjct: 9456 tggacggacggacggacaa 9438
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>gb|AC162943.2| Mus musculus BAC clone RP23-76K9 from chromosome 16, complete sequence
          Length = 184984

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 60    cttccatcttccctatctc 78
             |||||||||||||||||||
Sbjct: 86949 cttccatcttccctatctc 86967
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>emb|CR536618.8| Mouse DNA sequence from clone RP24-143B12 on chromosome X, complete
             sequence
          Length = 15529

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 132   gctggacggacggacggac 150
             |||||||||||||||||||
Sbjct: 11910 gctggacggacggacggac 11928



 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 132  gctggacggacggacggac 150
            |||||||||||||||||||
Sbjct: 3915 gctggacggacggacggac 3933
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>emb|CR524481.5| Zebrafish DNA sequence from clone CH211-81C11 in linkage group 22,
             complete sequence
          Length = 191642

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 134   tggacggacggacggacaa 152
             |||||||||||||||||||
Sbjct: 93169 tggacggacggacggacaa 93151
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>tpg|BK002614.1| TPA: TPA_inf: Drosophila melanogaster HDC14137 (HDC14137) gene,
           complete cds
          Length = 3290

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 134 tggacggacggacggacaa 152
           |||||||||||||||||||
Sbjct: 665 tggacggacggacggacaa 647
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>emb|AJ539223.1|MMU539223 Mus musculus mRNA for erythroid differentiation regulator (edr
           gene)
          Length = 700

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 132 gctggacggacggacggac 150
           |||||||||||||||||||
Sbjct: 444 gctggacggacggacggac 462
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>emb|AJ007909.1|MMU7909 Mus musculus mRNA for erythroid differentiation regulator, partial
          Length = 715

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 132 gctggacggacggacggac 150
           |||||||||||||||||||
Sbjct: 432 gctggacggacggacggac 450
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>emb|BX119977.10| Zebrafish DNA sequence from clone CH211-198A3 in linkage group 7,
             complete sequence
          Length = 182186

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 132   gctggacggacggacggac 150
             |||||||||||||||||||
Sbjct: 16634 gctggacggacggacggac 16616
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>dbj|AK051407.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
            enriched library, clone:D130046M06 product:ERYTHROID
            DIFFERENTIATION REGULATOR (FRAGMENT) homolog [Mus
            musculus], full insert sequence
          Length = 1272

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 132  gctggacggacggacggac 150
            |||||||||||||||||||
Sbjct: 1035 gctggacggacggacggac 1053
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>emb|BX539340.7| Zebrafish DNA sequence from clone DKEY-57K2 in linkage group 2,
             complete sequence
          Length = 234470

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 132   gctggacggacggacggac 150
             |||||||||||||||||||
Sbjct: 50771 gctggacggacggacggac 50789
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>emb|BX088536.8| Zebrafish DNA sequence from clone CH211-186M20 in linkage group 14,
             complete sequence
          Length = 104242

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 133   ctggacggacggacggaca 151
             |||||||||||||||||||
Sbjct: 21401 ctggacggacggacggaca 21383
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>emb|BX324188.7| Zebrafish DNA sequence from clone DKEY-85A20 in linkage group 13,
              complete sequence
          Length = 237686

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 132    gctggacggacggacggac 150
              |||||||||||||||||||
Sbjct: 203898 gctggacggacggacggac 203916
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>emb|BX784022.6| Zebrafish DNA sequence from clone CH211-152C8 in linkage group 18,
              complete sequence
          Length = 153244

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 132    gctggacggacggacggac 150
              |||||||||||||||||||
Sbjct: 114874 gctggacggacggacggac 114892
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>gb|AC007804.6|AC007804 Drosophila melanogaster, chromosome 3R, region 90A-90B, BAC clone
             BACR29H07, complete sequence
          Length = 175440

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 134   tggacggacggacggacaa 152
             |||||||||||||||||||
Sbjct: 88057 tggacggacggacggacaa 88039
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>gb|BC058113.1| Mus musculus erythroid differentiation regulator 1, mRNA (cDNA
           clone MGC:69587 IMAGE:6820436), complete cds
          Length = 910

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 132 gctggacggacggacggac 150
           |||||||||||||||||||
Sbjct: 737 gctggacggacggacggac 755



 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 132 gctggacggacggacggac 150
           |||||||||||||||||||
Sbjct: 352 gctggacggacggacggac 370
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>gb|AC154794.2| Mus musculus BAC clone RP24-485J1 from 16, complete sequence
          Length = 179257

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 60     cttccatcttccctatctc 78
              |||||||||||||||||||
Sbjct: 166717 cttccatcttccctatctc 166735
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>gb|BC080795.1| Mus musculus erythroid differentiation regulator 1, mRNA (cDNA
           clone MGC:91007 IMAGE:5006491), complete cds
          Length = 649

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 132 gctggacggacggacggac 150
           |||||||||||||||||||
Sbjct: 361 gctggacggacggacggac 379
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>gb|BC018296.1| Mus musculus erythroid differentiation regulator 1, mRNA (cDNA
           clone MGC:5764 IMAGE:3499536), complete cds
          Length = 801

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 132 gctggacggacggacggac 150
           |||||||||||||||||||
Sbjct: 511 gctggacggacggacggac 529
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>gb|AY108018.1| Zea mays PCO079082 mRNA sequence
          Length = 590

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 132 gctggacggacggacggac 150
           |||||||||||||||||||
Sbjct: 25  gctggacggacggacggac 7
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>gb|AE003718.3| Drosophila melanogaster chromosome 3R, section 56 of 118 of the
            complete sequence
          Length = 253101

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 134  tggacggacggacggacaa 152
            |||||||||||||||||||
Sbjct: 2143 tggacggacggacggacaa 2125
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>gb|AE003705.3| Drosophila melanogaster chromosome 3R, section 43 of 118 of the
             complete sequence
          Length = 216741

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 135   ggacggacggacggacaag 153
             |||||||||||||||||||
Sbjct: 22385 ggacggacggacggacaag 22403
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>gb|AC164611.3| Mus musculus BAC clone RP23-421C2 from chromosome 8, complete sequence
          Length = 188068

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 135   ggacggacggacggacaag 153
             |||||||||||||||||||
Sbjct: 10476 ggacggacggacggacaag 10458
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>emb|CT025753.11| Mouse DNA sequence from clone RP24-340F12 on chromosome 16, complete
              sequence
          Length = 231697

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 60     cttccatcttccctatctc 78
              |||||||||||||||||||
Sbjct: 131317 cttccatcttccctatctc 131299
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>gb|CP000224.1| Drosophila melanogaster genomic scaffold 211000022280794
          Length = 474727

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 136   gacggacggacggacaagg 154
             |||||||||||||||||||
Sbjct: 74460 gacggacggacggacaagg 74442
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>emb|CT009575.8| Mouse DNA sequence from clone RP23-107N17 on chromosome 17, complete
              sequence
          Length = 226188

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 61     ttccatcttccctatctcc 79
              |||||||||||||||||||
Sbjct: 180940 ttccatcttccctatctcc 180922
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>emb|AL844193.6| Zebrafish DNA sequence from clone DKEY-28J3, complete sequence
          Length = 210900

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 129   cttgctggacggacggacggaca 151
             |||| ||||||||||||||||||
Sbjct: 52943 cttgatggacggacggacggaca 52965
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>emb|AL390798.3|CNS06C7P Human chromosome 14 DNA sequence BAC R-21O19 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 154140

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 59    gcttccatcttccctatct 77
             |||||||||||||||||||
Sbjct: 20063 gcttccatcttccctatct 20045
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>gb|AY552846.1| Meleagris gallopavo clone MNT-274 microsatellite sequences
          Length = 416

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 133 ctggacggacggacggaca 151
           |||||||||||||||||||
Sbjct: 302 ctggacggacggacggaca 320


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,245,494
Number of Sequences: 3902068
Number of extensions: 1245494
Number of successful extensions: 93245
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92916
Number of HSP's gapped (non-prelim): 329
length of query: 195
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 173
effective length of database: 17,147,199,772
effective search space: 2966465560556
effective search space used: 2966465560556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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