Clone Information

BLAST Search Result

Clone Name	rbaet119f12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SOX14_DROME (P40656) Putative transcription factor SOX-14	35	0.057
2	YD134_YEAST (Q7LHD1) Protein YDR134C precursor	33	0.17
3	BLI1_CAEEL (Q09457) Cuticle collagen bli-1 (Blistered cuticle pr...	33	0.22
4	K0226_HUMAN (Q92622) Protein KIAA0226	32	0.28
5	IF2_CAUCR (Q9AC25) Translation initiation factor IF-2	32	0.28
6	MYST3_MOUSE (Q8BZ21) Histone acetyltransferase MYST3 (EC 2.3.1.4...	32	0.48
7	LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alterna...	32	0.48
8	MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48)...	32	0.48
9	ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)	32	0.48
10	CHEB2_PSE14 (Q48GG6) Chemotaxis response regulator protein-gluta...	32	0.48
11	IF2_GLOVI (Q7NH85) Translation initiation factor IF-2	32	0.48
12	SOX_ARATH (Q9SJA7) Probable sarcosine oxidase (EC 1.5.3.1)	32	0.48
13	CHEB1_PSESM (Q884V3) Chemotaxis response regulator protein-gluta...	31	0.63
14	ATX2L_HUMAN (Q8WWM7) Ataxin-2-like protein (Ataxin-2 domain prot...	25	0.68
15	PALH_YARLI (Q9UVF6) pH-response regulator protein palH/RIM21	31	0.82
16	GON4L_RAT (Q535K8) GON-4-like protein (Protein GON4) (GON-4 homo...	31	0.82
17	ATX2L_MOUSE (Q7TQH0) Ataxin-2-like protein	25	1.1
18	LDB3_HUMAN (O75112) LIM domain-binding protein 3 (Z-band alterna...	30	1.4
19	ESCA_DROME (P25932) Protein escargot (Protein fleabag)	30	1.4
20	PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakar...	30	1.4
21	ULK1_MOUSE (O70405) Serine/threonine-protein kinase ULK1 (EC 2.7...	30	1.8
22	MYST3_HUMAN (Q92794) Histone acetyltransferase MYST3 (EC 2.3.1.4...	30	1.8
23	NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)	30	1.8
24	INO2_YEAST (P26798) Protein INO2	29	2.4
25	CN101_HUMAN (Q9NX78) Protein C14orf101	29	2.4
26	FOXGB_HUMAN (P55315) Forkhead box protein G1B (Forkhead-related ...	29	2.4
27	BRO1_EMENI (Q6XPR4) Vacuolar protein-sorting protein bro1 (BRO d...	29	2.4
28	PRG4_MOUSE (Q9JM99) Proteoglycan-4 precursor (Lubricin) (Megakar...	29	2.4
29	SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains prote...	29	3.1
30	ZCH14_MOUSE (Q8VIG0) Zinc finger CCHC domain-containing protein ...	29	3.1
31	DPOL_HHV21 (P07918) DNA polymerase (EC 2.7.7.7)	29	3.1
32	MUC1_YEAST (P08640) Mucin-like protein 1 precursor	29	3.1
33	GSHR_ECOLI (P06715) Glutathione reductase (EC 1.8.1.7) (GR) (GRase)	29	3.1
34	SLP1_SCHPO (P78972) WD-repeat-containing protein slp1	29	3.1
35	HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (E...	28	4.1
36	ZO1_HUMAN (Q07157) Tight junction protein ZO-1 (Zonula occludens...	28	4.1
37	EYA2_HUMAN (O00167) Eyes absent homolog 2 (EC 3.1.3.48)	28	4.1
38	TIF1G_HUMAN (Q9UPN9) Transcription intermediary factor 1-gamma (...	28	4.1
39	VG08_ICHV1 (Q00137) Hypothetical gene 8 membrane protein	28	4.1
40	TIF1G_MOUSE (Q99PP7) Transcription intermediary factor 1-gamma (...	28	4.1
41	PHR_HALSA (Q9HQ46) Deoxyribodipyrimidine photo-lyase (EC 4.1.99....	28	4.1
42	MARE2_HUMAN (Q15555) Microtubule-associated protein RP/EB family...	28	4.1
43	Y091_NPVAC (P41479) Hypothetical 24.1 kDa protein in LEF4-P33 in...	28	4.1
44	12KD_FRAAN (Q05349) Auxin-repressed 12.5 kDa protein	28	5.3
45	PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM ...	28	5.3
46	MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia p...	28	5.3
47	EXON_HHV11 (P04294) Alkaline exonuclease (EC 3.1.11.-)	28	5.3
48	CDAN1_HUMAN (Q8IWY9) Codanin-1	28	5.3
49	YGY4_HALSQ (P21562) Hypothetical 80.2 kDa protein in the 5'regio...	28	6.9
50	RNF13_MOUSE (O54965) RING finger protein 13	28	6.9
51	SENP1_MOUSE (P59110) Sentrin-specific protease 1 (EC 3.4.22.-) (...	28	6.9
52	NFAC1_PIG (O77638) Nuclear factor of activated T-cells, cytoplas...	28	6.9
53	ZCHC8_CHICK (Q5F3D1) Zinc finger CCHC domain-containing protein 8	28	6.9
54	RPOM_NEUCR (P38671) DNA-directed RNA polymerase, mitochondrial p...	28	6.9
55	F19A3_MOUSE (Q7TPG6) Protein FAM19A3 precursor (Chemokine-like p...	28	6.9
56	TATB_XANCP (Q8P3H9) Sec-independent protein translocase protein ...	28	6.9
57	F19A3_HUMAN (Q7Z5A8) Protein FAM19A3 precursor (Chemokine-like p...	28	6.9
58	KRUP_DROME (P07247) Protein krueppel	28	6.9
59	ENV_MLVF5 (P03390) Env polyprotein precursor [Contains: Coat pro...	28	6.9
60	AMSD_ERWAM (Q46634) Amylovoran biosynthesis glycosyl transferase...	28	6.9
61	SPEN_DROME (Q8SX83) Protein split ends	28	6.9
62	RPOC2_LOTJA (Q9BBS7) DNA-directed RNA polymerase beta'' chain (E...	28	6.9
63	SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding fact...	28	6.9
64	IF2_DESPS (Q6AJY4) Translation initiation factor IF-2	28	6.9
65	ZCH14_HUMAN (Q8WYQ9) Zinc finger CCHC domain-containing protein ...	27	9.1
66	MED12_HUMAN (Q93074) Mediator of RNA polymerase II transcription...	27	9.1
67	CEBPA_RAT (P05554) CCAAT/enhancer-binding protein alpha (C/EBP a...	27	9.1
68	MALE_PYRAB (Q9V297) Maltotriose-binding protein precursor (Malto...	27	9.1
69	HPS4_MOUSE (Q99KG7) Hermansky-Pudlak syndrome 4 protein homolog ...	27	9.1
70	SOCS1_MOUSE (O35716) Suppressor of cytokine signaling 1 (SOCS-1)...	27	9.1
71	OSBL9_HUMAN (Q96SU4) Oxysterol-binding protein-related protein 9...	27	9.1
72	MARE2_MOUSE (Q8R001) Microtubule-associated protein RP/EB family...	27	9.1
73	MARE2_CHICK (Q5ZKK1) Microtubule-associated protein RP/EB family...	27	9.1
74	GSH2_MOUSE (P31316) Homeobox protein GSH-2	27	9.1
75	PGK_MYCGA (Q7NBG7) Phosphoglycerate kinase (EC 2.7.2.3)	27	9.1
76	DNMBP_HUMAN (Q6XZF7) Dynamin-binding protein (Scaffold protein T...	27	9.1
77	SPKC_SYNY3 (P74745) Serine/threonine-protein kinase C (EC 2.7.11.1)	27	9.1
78	CENPC_HUMAN (Q03188) Centromere protein C 1 (CENP-C) (Centromere...	27	9.1
79	AGRN_RAT (P25304) Agrin precursor	27	9.1
80	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	27	9.1

>SOX14_DROME (P40656) Putative transcription factor SOX-14|
          Length = 472

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = +1

Query: 127 PFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYNDSA 294
           P P    T H   P+ P P+   +P+PAP QT    +KT      T P  V + SA
Sbjct: 42  PAPKADSTPHTLPPFSPSPSPASSPSPAPAQT-PGAQKTQSQAAITHPAAVASPSA 96

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>YD134_YEAST (Q7LHD1) Protein YDR134C precursor|
          Length = 136

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = +1

Query: 136 ICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYNDSA 294
           I QYTT   LP    P +T +PAP    T     K  +  + TQ  T Y  +A
Sbjct: 65  ITQYTTWCPLPTTEAPKNTTSPAPTEKPTEKPTEKPTQQGSSTQTVTSYTGAA 117

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>BLI1_CAEEL (Q09457) Cuticle collagen bli-1 (Blistered cuticle protein 1)|
          Length = 963

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 16/90 (17%)
 Frame = +1

Query: 106 SSIFPHSPFPICQYTTHLSLPYR-PRPNSTDAPA-PAPNQTFFSPRKTHRHHTPTQPD-- 273
           +S++   P P   Y T+  +PY  P+PN T  P  P  N+  + P ++     P QP   
Sbjct: 208 TSLYNPQPPPKTGYPTNPRVPYNPPQPNYTRQPTYPEDNRAPYKPTRSPNTPPPRQPSGG 267

Query: 274 ------------TVYNDSARRKDGPYTPND 327
                        +YN       GP  P D
Sbjct: 268 YDSDGQTPPSSPRIYNTRRPNNHGPGYPED 297



 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +1

Query: 166 PYRPR-PNSTDAPAPAPNQ--TFFSPRKTHRHHTPTQPDTVYN 285
           PY P+ P ST AP  +PN   + ++P+   +   PT P   YN
Sbjct: 188 PYPPQQPPSTSAPHSSPNNRTSLYNPQPPPKTGYPTNPRVPYN 230

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>K0226_HUMAN (Q92622) Protein KIAA0226|
          Length = 972

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
 Frame = +1

Query: 82  ESVSCTPASSIFPHSPFPICQYTTHLSLPYRPRPN------STDAPAPAPNQTFFSPRKT 243
           +S++  P+S+  P + +    Y    S  ++  PN      ST  P   P +    P+++
Sbjct: 205 QSLTALPSSTYTPPNSYAQHSYFGSFSSLHQSVPNNGSERRSTSFPLSGPPR---KPQES 261

Query: 244 HRHHTPTQPDTVY----NDSARRKDGPYTPNDLT 333
             H +P +  T+     + SA  +D P TPN+++
Sbjct: 262 RGHVSPAEDQTIQAPPVSVSALARDSPLTPNEMS 295

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>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2|
          Length = 1009

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
 Frame = +1

Query: 73  SGRESVSCTPASSIFPHSPFPICQYTTHLSLPYRPRPNSTDAPAP-APNQTFFSPRKTHR 249
           +   + +  P  +  P +P P    T   + P  PRP +    AP AP Q   +PR+  R
Sbjct: 140 AAERAAAAPPPVAQAPAAPAPAAPVTPPPAAPQAPRPVAQAPVAPSAPRQD--APRQDTR 197

Query: 250 HHTPTQPDTVYNDSARRKDGPYT 318
              P Q  T      RR D P T
Sbjct: 198 AAAPGQTRTYEPSRDRRDDRPST 220

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>MYST3_MOUSE (Q8BZ21) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)|
           (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
           3) (Monocytic leukemia zinc finger protein) (Monocytic
           leukemia zinc finger homolog)
          Length = 2003

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 7/35 (20%)
 Frame = +1

Query: 64  KGESGRESVSCTPASSIFPH-------SPFPICQY 147
           +G+ G ES+SC P  S+ PH        P PIC +
Sbjct: 177 EGKEGCESLSCLPPVSLLPHEKDKPVAEPIPICSF 211

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>LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alternatively spliced|
           PDZ-motif protein) (Protein cypher) (Protein oracle)
          Length = 723

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = +1

Query: 118 PHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYN 285
           P++P P   YT   +  Y P P  T +P+PAP  T  SP     ++TPT P   Y+
Sbjct: 424 PYTPSPAPAYTPSPAPTYTPSPAPTYSPSPAPAYT-PSPAP---NYTPT-PSAAYS 474



 Score = 31.2 bits (69), Expect = 0.63
 Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
 Frame = +1

Query: 100 PASSIFP-----HSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPT 264
           PASS  P     +SP P   YT   +  Y P P  T  P+PAP    +SP     +    
Sbjct: 408 PASSYSPSPGANYSPTP---YTPSPAPAYTPSPAPTYTPSPAPT---YSPSPAPAYTPSP 461

Query: 265 QPDTVYNDSARRKDGP 312
            P+     SA    GP
Sbjct: 462 APNYTPTPSAAYSGGP 477

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>MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)|
           (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
           3) (Monocytic leukemia zinc finger protein) (Monocytic
           leukemia zinc finger homolog)
          Length = 1998

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 7/35 (20%)
 Frame = +1

Query: 64  KGESGRESVSCTPASSIFPH-------SPFPICQY 147
           +G+ G ES+SC P  S+ PH        P PIC +
Sbjct: 177 EGKEGCESLSCLPPVSLLPHEKDKPVAEPIPICSF 211

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>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)|
          Length = 2469

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 61   IKGESGRESVSCTPASSIFPHSP--FPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSP 234
            + G +  ESV     +   P  P   P  Q T    LP +P+PNS + P P P++     
Sbjct: 2338 VPGPARSESVGSFGRAPSAPDKPPRTPRKQATPSRVLPTKPKPNSQNKPRPPPSE----Q 2393

Query: 235  RKTHRHHT 258
            RK    HT
Sbjct: 2394 RKAEPGHT 2401

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>CHEB2_PSE14 (Q48GG6) Chemotaxis response regulator protein-glutamate|
           methylesterase 2 (EC 3.1.1.61)
          Length = 387

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 19/62 (30%), Positives = 25/62 (40%)
 Frame = +1

Query: 91  SCTPASSIFPHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQP 270
           + + AS+  P +P    +     + P R  P  T APA AP          H HH P  P
Sbjct: 141 AASAASAAAPAAPTSSSRAPAPTTAPARAVPTRTAAPATAP--------AAHAHHAPAHP 192

Query: 271 DT 276
            T
Sbjct: 193 TT 194

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>IF2_GLOVI (Q7NH85) Translation initiation factor IF-2|
          Length = 925

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
 Frame = +1

Query: 127 PFPICQYTTHLSLPYRPRP-NSTDAPAPAPNQTFFSPRKTHRHHTPTQP 270
           P P  +    +  P  P P   T APAPAP  T   P +  R   P QP
Sbjct: 208 PAPAAEAPQPVRPPAPPAPAKPTPAPAPAPRPTAEQPSEPRRPQPPAQP 256

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>SOX_ARATH (Q9SJA7) Probable sarcosine oxidase (EC 1.5.3.1)|
          Length = 416

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +3

Query: 48  YY--INYKRREWAGERILYACLLHFPTQPFSHLPIHDSSLTSLQTETQLHG 194
           YY  ++   R WA  +      +HFPTQ F   P    SL S+    Q HG
Sbjct: 65  YYSMVSESTRLWAAAQSEIGYKVHFPTQQFDMGPADQQSLLSVVATCQKHG 115

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>CHEB1_PSESM (Q884V3) Chemotaxis response regulator protein-glutamate|
           methylesterase of group 1 operon (EC 3.1.1.61)
          Length = 390

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = +1

Query: 166 PYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYNDSARRK 303
           P R  P+ T APA AP          H HHTP  P T    +A+RK
Sbjct: 169 PARAVPSRTVAPAAAP--------AAHAHHTPAHPTT--TGTAKRK 204

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>ATX2L_HUMAN (Q8WWM7) Ataxin-2-like protein (Ataxin-2 domain protein)|
           (Ataxin-2-related protein)
          Length = 1075

 Score = 25.4 bits (54), Expect(2) = 0.68
 Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
 Frame = +1

Query: 127 PFPICQYTT-HLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQ 267
           P P   Y T H S P+         P PA   T   P+  H   +P Q
Sbjct: 848 PTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQ 895



 Score = 24.3 bits (51), Expect(2) = 0.68
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 51  YINYKRREWAGERILYACLLHFPTQP 128
           YI Y  +++ G+  +   + H+P+QP
Sbjct: 787 YIPYNPQQFPGQPAMMQPMAHYPSQP 812

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>PALH_YARLI (Q9UVF6) pH-response regulator protein palH/RIM21|
          Length = 632

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
 Frame = +1

Query: 148 TTHLSLPYRPRPN----STDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYNDSARRKDGPY 315
           T  L  P   RP      T APAP P ++F    +  ++H   + D  Y        G  
Sbjct: 67  TVKLQAPAVFRPQCALGGTRAPAPRPEESFPDWSEYQKYHHNDRRDPFY--------GSV 118

Query: 316 TPNDLTVAASCVVALPVL 369
           TP   T+AAS V A  +L
Sbjct: 119 TPIAYTIAASTVTAWMLL 136

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>GON4L_RAT (Q535K8) GON-4-like protein (Protein GON4) (GON-4 homolog)|
          Length = 2256

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 14/78 (17%)
 Frame = +1

Query: 64   KGESGRESVSCTPASSIFPH--------------SPFPICQYTTHLSLPYRPRPNSTDAP 201
            + ++G E VSC   SSI P               +P P    T  L       P + + P
Sbjct: 2013 RNQAGPEVVSCLGTSSIPPKEGEDQKAVANSETIAPLPETSETERL-------PGTVELP 2065

Query: 202  APAPNQTFFSPRKTHRHH 255
            AP P+    S R T R H
Sbjct: 2066 APLPSPVSLSTRDTGRRH 2083

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>ATX2L_MOUSE (Q7TQH0) Ataxin-2-like protein|
          Length = 1049

 Score = 24.6 bits (52), Expect(2) = 1.1
 Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
 Frame = +1

Query: 127 PFPICQYTT-HLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQ 267
           P P   Y T H S P+         P PA   T   P+  H   +P Q
Sbjct: 852 PTPQALYATVHQSYPHHATQLHGHQPQPATTPTGSQPQSQHAAPSPVQ 899



 Score = 24.3 bits (51), Expect(2) = 1.1
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 51  YINYKRREWAGERILYACLLHFPTQP 128
           YI Y  +++ G+  +   + H+P+QP
Sbjct: 791 YIPYNPQQFPGQPAMMQPMAHYPSQP 816

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>LDB3_HUMAN (O75112) LIM domain-binding protein 3 (Z-band alternatively spliced|
           PDZ-motif protein) (Protein cypher)
          Length = 727

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 118 PHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQT 222
           P++P P   YT   +  Y P P  T  P+PAP  T
Sbjct: 428 PYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYT 462

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>ESCA_DROME (P25932) Protein escargot (Protein fleabag)|
          Length = 470

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 27/96 (28%), Positives = 37/96 (38%)
 Frame = +1

Query: 76  GRESVSCTPASSIFPHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHH 255
           GR S    P  S   H P  + Q   H  LPY   P         P+   ++   TH HH
Sbjct: 183 GRASSVSPPMRSEIIHRPIGVRQ---HRFLPYPQMPGY-------PSLGGYT--HTHHHH 230

Query: 256 TPTQPDTVYNDSARRKDGPYTPNDLTVAASCVVALP 363
            P  P       A  ++  Y+   +T  +SC  +LP
Sbjct: 231 APISP-------AYSENSYYSMRSMTPESSCSSSLP 259

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>PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte|
           stimulating factor) (Superficial zone proteoglycan)
           [Contains: Proteoglycan-4 C-terminal part]
          Length = 1404

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
 Frame = +1

Query: 118 PHSPFPICQYTTHLSLPYRPRPNSTDAPA------PAPNQTFFSPRKTHRHHTPTQPDTV 279
           P  P P        + P  P P +T  PA      PAP     +   T +  TPT P+ +
Sbjct: 573 PKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKL 632

Query: 280 YNDSARRKDGPYTPNDL 330
              +   K  P TP +L
Sbjct: 633 -APTTPEKPAPTTPEEL 648



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 19/79 (24%), Positives = 31/79 (39%)
 Frame = +1

Query: 97  TPASSIFPHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDT 276
           T ++   P  P P        + P  P P +T  PAP   ++  +  K     TP +P  
Sbjct: 386 TKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKP-- 443

Query: 277 VYNDSARRKDGPYTPNDLT 333
               +  ++  P TP + T
Sbjct: 444 --APTTPKEPAPTTPKEPT 460

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>ULK1_MOUSE (O70405) Serine/threonine-protein kinase ULK1 (EC 2.7.11.1)|
           (Unc-51-like kinase 1) (Serine/threonine-protein kinase
           Unc51.1)
          Length = 1051

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
 Frame = +1

Query: 73  SGRESVSCTPASSIFPHSPFPICQYTTHLSLPYRPRPNSTD-----APAPAPNQTFFSPR 237
           +G ES   TP       SP P C  +   S   RP P S++      P P P Q     R
Sbjct: 393 AGLESHGRTP-------SPSPTCSSSPSPS--GRPGPFSSNRYGASVPIPVPTQVHNYQR 443

Query: 238 KTHRHHTPTQPDTVYNDSARRKDGPYTP 321
                 +PTQ  T    SA R+ G  TP
Sbjct: 444 IEQNLQSPTQQQTA-RSSAIRRSGSTTP 470

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>MYST3_HUMAN (Q92794) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)|
           (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
           3) (Runt-related transcription factor-binding protein 2)
           (Monocytic leukemia zinc finger protein) (Zinc finger
           protei
          Length = 2004

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 7/36 (19%)
 Frame = +1

Query: 61  IKGESGRESVSCTPASSIFPH-------SPFPICQY 147
           + G+   ES+SC P  S+ PH        P PIC +
Sbjct: 176 VDGKESCESLSCLPPVSLLPHEKDKPVAEPIPICSF 211

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>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +1

Query: 100 PASSIFPHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKT----HRHHTPTQ 267
           P S   P S  PI  +    SLP  P P+ + +P+P+P+    SPR T     R  +P  
Sbjct: 139 PPSPPTPRSSTPI-PHPPRRSLPSPPSPSPSPSPSPSPSP---SPRSTPIPHPRKRSPAS 194

Query: 268 P 270
           P
Sbjct: 195 P 195

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>INO2_YEAST (P26798) Protein INO2|
          Length = 304

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = +1

Query: 205 PAPNQTFFSPRKTHRH---HTPTQPDTVYNDSARRKDGP 312
           PA NQT  +P  TH H   H P QP   ++ +   K  P
Sbjct: 75  PADNQTHHAPLHTHAHYLNHNPHQPSMGFDQALGLKLSP 113

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>CN101_HUMAN (Q9NX78) Protein C14orf101|
          Length = 707

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = +3

Query: 51  YINYKRREWAGERILYACLLHFPTQPFSHLPIHDSSLTSLQTETQLHGRTRTRTQ 215
           Y+N+ R  W  +  L   L HF  + +    +  S + S  +E  L   T  RT+
Sbjct: 241 YLNHARWTWGDQTTLQGFLTHFLREEYGTFSLAKSEIGSSMSEILLSQVTNMRTE 295

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>FOXGB_HUMAN (P55315) Forkhead box protein G1B (Forkhead-related protein FKHL1)|
           (Transcription factor BF-1) (Brain factor 1) (BF1)
           (HFK1)
          Length = 477

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1

Query: 106 SSIFPHSPFPICQYTTHLSLPYRPRPNSTDAPAPAP 213
           S  FPH P P     +  S+  R   +ST  PAP P
Sbjct: 403 SYFFPHVPHPSMTSQSSTSMSARAASSSTSPPAPRP 438

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>BRO1_EMENI (Q6XPR4) Vacuolar protein-sorting protein bro1 (BRO domain-containing|
            protein 1)
          Length = 1000

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 21/79 (26%)
 Frame = +1

Query: 97   TPASSIFPHSPFPICQYT-------------------THLSLPYRPR--PNSTDAPAPAP 213
            TP S    HSP P  QY                      LS  Y P   P    + +P P
Sbjct: 846  TPVS----HSPAPYSQYVPPGAGVSYLPSQSFQQGAAAPLSEGYNPMAYPIPASSMSPPP 901

Query: 214  NQTFFSPRKTHRHHTPTQP 270
            +Q F+SP  T  + +PT P
Sbjct: 902  SQPFYSPTPTPFYTSPTPP 920

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>PRG4_MOUSE (Q9JM99) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte|
           stimulating factor) (Superficial zone proteoglycan)
           [Contains: Proteoglycan-4 C-terminal part]
          Length = 1054

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
 Frame = +1

Query: 82  ESVSCTPASSIFPHSPFPIC--QYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHH 255
           E  S TP +S    +  P+   + +  L LP  P P +   P P   +   + RK     
Sbjct: 318 EPTSTTPKNSAPTTTKKPVTTTKESKFLPLPQEPEPTTAKEPPPTTKKPEPTTRKEPEPT 377

Query: 256 TPTQPDTVYNDSARRKDGPYTPND 327
           TP +P+     +  ++  P TP +
Sbjct: 378 TPKEPE----PTTPKEPEPTTPKE 397

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>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +1

Query: 175  PRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPD-TVYNDSARRKDG 309
            PRP S    AP P     SP   H  H   +P   ++ D ARR+ G
Sbjct: 1382 PRPPSPRYDAPPPTLHHHSPHSPHSPHARHEPVLRLWGDPARRELG 1427

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>ZCH14_MOUSE (Q8VIG0) Zinc finger CCHC domain-containing protein 14 (BDG-29)|
          Length = 956

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 14/73 (19%)
 Frame = +1

Query: 94  CTPASSIFPHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFF--------------S 231
           C  +++  P S  P   + +  SLP  P P+S+ A +  P  +F+              S
Sbjct: 708 CANSNTASPSS-HPSTSFASMASLPSCPAPSSSPALSSVPESSFYSGGAGSSSPGNIPAS 766

Query: 232 PRKTHRHHTPTQP 270
            +  H HH   QP
Sbjct: 767 SQSHHHHHHHQQP 779

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>DPOL_HHV21 (P07918) DNA polymerase (EC 2.7.7.7)|
          Length = 1240

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 166 PYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQP 270
           P+ PR  +  AP P   Q F++P   H   T TQP
Sbjct: 26  PHNPRGATQTAPPPCRRQNFYNP---HLAQTGTQP 57

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>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
 Frame = +1

Query: 97  TPASSIFPHSPFPICQYTTHLSLPYRPRPN-----STDAPAPAPNQTFFSPRKTHRHHTP 261
           TP+SS    S  P+   TT  S    P P+     S+ APAP P     S   T     P
Sbjct: 487 TPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPAPTP-----SSSTTESSSAP 541

Query: 262 TQPDTVYNDSA 294
               T  + SA
Sbjct: 542 VTSSTTESSSA 552



 Score = 28.5 bits (62), Expect = 4.1
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
 Frame = +1

Query: 97  TPASSIFPHSPFPICQYTTHLSLPYRPRPN-----STDAPAPAPNQTFFSPRKTHRHHTP 261
           TP+SS    S  P+   TT  S    P P+     S+ AP P P+    S  ++     P
Sbjct: 739 TPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSS---STTESSSAPVP 795

Query: 262 TQPDTVYNDSARRKDGPYTPNDLTVAA 342
           T   +    S      P + +++T +A
Sbjct: 796 TPSSSTTESSVAPVPTPSSSSNITSSA 822

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>GSHR_ECOLI (P06715) Glutathione reductase (EC 1.8.1.7) (GR) (GRase)|
          Length = 450

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/57 (33%), Positives = 24/57 (42%)
 Frame = +3

Query: 111 HFPTQPFSHLPIHDSSLTSLQTETQLHGRTRTRTQPNLFLT*KDAPTPHTHPTRYSL 281
           + PT  FSH PI    LT  Q   Q +G  + +   + F     A T H  P R  L
Sbjct: 338 NIPTVVFSHPPIGTVGLTEPQAREQ-YGDDQVKVYKSSFTAMYTAVTTHRQPCRMKL 393

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>SLP1_SCHPO (P78972) WD-repeat-containing protein slp1|
          Length = 488

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +1

Query: 67  GESGRESVSCTPASSIFPHSPFPICQYTTHLSLPYRPRPNSTDAPA 204
           G +GR S  C+P SS   +SP  I    T  S+P    P +   PA
Sbjct: 40  GRNGRSSKRCSPKSSFIRNSP-KIDVVNTDWSIPLCGSPRNKSRPA 84

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>HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (EC 3.6.1.-)|
          Length = 1942

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +1

Query: 118  PHSPFPICQYTTHLSL-PYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTP 261
            P  P  + Q  + L+  P +P P  + A    PN  FF+    HR  +P
Sbjct: 1395 PPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNSAVAHRPQSP 1443

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>ZO1_HUMAN (Q07157) Tight junction protein ZO-1 (Zonula occludens 1 protein)|
            (Zona occludens 1 protein) (Tight junction protein 1)
          Length = 1748

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/56 (26%), Positives = 22/56 (39%)
 Frame = +1

Query: 100  PASSIFPHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQ 267
            P +S   H   P   Y TH  L    +P+ +  P PA ++ +F          P Q
Sbjct: 1150 PRASALRHEEQPAPGYDTHGRLRPEAQPHPSAGPKPAESKQYFEQYSRSYEQVPPQ 1205

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>EYA2_HUMAN (O00167) Eyes absent homolog 2 (EC 3.1.3.48)|
          Length = 538

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
 Frame = +1

Query: 115 FPHSP-FPICQYTTHLSLPYRPR--PNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYN 285
           +P  P FP  QY  +    Y P   P S+  P+P    T+     +  H+ P Q      
Sbjct: 163 YPSYPGFPQSQYPQYYGSSYNPPYVPASSICPSPLSTSTYVLQEAS--HNVPNQSSESLA 220

Query: 286 DSARRKDGPYTP 321
                 +GP TP
Sbjct: 221 GEYNTHNGPSTP 232

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>TIF1G_HUMAN (Q9UPN9) Transcription intermediary factor 1-gamma (TIF1-gamma)|
           (RET-fused gene 7 protein) (Rfg7 protein) (Tripartite
           motif protein 33)
          Length = 1127

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = +1

Query: 136 ICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYNDSARRKDG 309
           + +Y +   LP  P+P ST  P+P P+            HTP +P +  +  +R   G
Sbjct: 700 LSRYISGSHLP--PQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCG 755

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>VG08_ICHV1 (Q00137) Hypothetical gene 8 membrane protein|
          Length = 232

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +1

Query: 85  SVSCTPASSIFPHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFS-PRKTHRHHTP 261
           S S + A+SI P +P P     +    P+R R  ST+ P P P++   S P   H    P
Sbjct: 68  STSGSSAASI-PSAPTPDATRESPTGEPHRDRALSTETPTPEPSRDGGSTPEVLHVVTGP 126

Query: 262 TQP 270
            +P
Sbjct: 127 VRP 129

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>TIF1G_MOUSE (Q99PP7) Transcription intermediary factor 1-gamma (TIF1-gamma)|
           (Tripartite motif protein 33)
          Length = 1142

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = +1

Query: 136 ICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYNDSARRKDG 309
           + +Y +   LP  P+P ST  P+P P+            HTP +P +  +  +R   G
Sbjct: 715 LSRYISGSHLP--PQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCG 770

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>PHR_HALSA (Q9HQ46) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA|
           photolyase) (Photoreactivating enzyme)
          Length = 481

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +1

Query: 181 PNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYNDSARRKD 306
           P   D PA A +          R H P  PD + + S RR+D
Sbjct: 428 PELRDVPADAIHSWHELSLSERRRHAPEYPDPIVDHSQRRED 469

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>MARE2_HUMAN (Q15555) Microtubule-associated protein RP/EB family member 2|
           (APC-binding protein EB2) (End-binding protein 2) (EB2)
          Length = 327

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +1

Query: 166 PYRPRPNSTDAPAPAPNQTFFS-PRKTHRHHTPTQPDTVYNDSARRKDGPYTPNDLTVAA 342
           P   R      P P P +  F+ P+K+H  ++PT      + +A+    P  P+    A+
Sbjct: 169 PVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSAKRAS 228

Query: 343 S 345
           S
Sbjct: 229 S 229

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>Y091_NPVAC (P41479) Hypothetical 24.1 kDa protein in LEF4-P33 intergenic|
           region
          Length = 224

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/56 (32%), Positives = 22/56 (39%)
 Frame = +1

Query: 97  TPASSIFPHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPT 264
           +P S   P +P P     T    P  P P  T  P+P P     SP  +    TPT
Sbjct: 61  SPPSPTPPPTPIPPTPTPTPPPTPIPPTPTPTPPPSPIPPTPTPSPPPSPIPPTPT 116

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>12KD_FRAAN (Q05349) Auxin-repressed 12.5 kDa protein|
          Length = 111

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 21/80 (26%), Positives = 37/80 (46%)
 Frame = +1

Query: 64  KGESGRESVSCTPASSIFPHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKT 243
           +GES + ++  TP + + P +P    +     S+ +   P S  +     NQ F SP+  
Sbjct: 36  EGESSKITMPTTPTTPVTPTTPISARKDNVWRSVFH---PGSNLSSKTMGNQVFDSPQP- 91

Query: 244 HRHHTPTQPDTVYNDSARRK 303
              ++PT  D +Y+   R K
Sbjct: 92  ---NSPTVYDWMYSGETRSK 108

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>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore|
           membrane protein of 121 kDa) (P145)
          Length = 1229

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 178 RPNSTDAPAPAPNQTFFSPRKTHRHHTPTQP 270
           +P +T AP+PAP Q+F    +     +P  P
Sbjct: 666 KPQATSAPSPAPKQSFLFGTQNTSPSSPAAP 696

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>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
            (ALL1-related protein)
          Length = 5262

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/59 (30%), Positives = 24/59 (40%)
 Frame = +1

Query: 154  HLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYNDSARRKDGPYTPNDL 330
            HL +P  P+P +  +P PA   T F    T      T  D      A    GP +P +L
Sbjct: 1828 HLRIP--PQPGALGSPPPAAAPTIFIGSPTTPAGLSTSADGFLKPPAGSVPGPDSPGEL 1884

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>EXON_HHV11 (P04294) Alkaline exonuclease (EC 3.1.11.-)|
          Length = 626

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/69 (26%), Positives = 25/69 (36%)
 Frame = +1

Query: 118 PHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYNDSAR 297
           P  P P     T    P  P P +T A  P+ +     PR  H   T  +     + +  
Sbjct: 34  PKRPRPNSLPLTTTFRPLPPPPQTTSAVDPSSHSPVNPPRDQHATDTADEKPRAASPALS 93

Query: 298 RKDGPYTPN 324
              GP TP+
Sbjct: 94  DASGPPTPD 102

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>CDAN1_HUMAN (Q8IWY9) Codanin-1|
          Length = 1226

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +1

Query: 88  VSCTPASSIFPHSPFPICQYTTHLSLPYRPRPNS-TDAPA 204
           +SC P+S     SP P C  T  L  P   R  S TD PA
Sbjct: 252 ISCVPSSKQLQQSPTPTCP-TPELGSPLPSRTGSLTDEPA 290

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>YGY4_HALSQ (P21562) Hypothetical 80.2 kDa protein in the 5'region of gyrA and|
           gyrB (ORF 4)
          Length = 744

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 4/27 (14%)
 Frame = +1

Query: 244 HRHHTPTQP----DTVYNDSARRKDGP 312
           HR   PT P    D+VY+DSA R++ P
Sbjct: 703 HRRRRPTDPRFVGDSVYHDSAFRRERP 729

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>RNF13_MOUSE (O54965) RING finger protein 13|
          Length = 381

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +1

Query: 202 APAPNQTFFSPRKTHRHHTPTQPDTVYNDSARRKDGPYTPNDLTVAASCVVALPVLGVRD 381
           A A  Q+F S  ++H HH  T+     +D     D     N++T     VV L   G +D
Sbjct: 316 ASARTQSFGSLSESHSHHNMTESSDYEDDDNEETDSSDADNEIT-DHIVVVQLQPNGEQD 374

Query: 382 FS 387
           ++
Sbjct: 375 YN 376

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>SENP1_MOUSE (P59110) Sentrin-specific protease 1 (EC 3.4.22.-)|
           (Sentrin/SUMO-specific protease SENP1)
          Length = 640

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
 Frame = +1

Query: 199 PAPAPN------QTFFSPRKTHRHHTPTQPDTVYND 288
           PAP+P+      ++  SP+KT R H  T  +TV  +
Sbjct: 154 PAPSPSWSGSCRRSLLSPKKTQRRHFSTAEETVQEE 189

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>NFAC1_PIG (O77638) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT|
           transcription complex cytosolic component) (NF-ATc1)
           (NF-ATc) (NFATmac)
          Length = 822

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
 Frame = +1

Query: 61  IKGESGRESVSCTPASSIFPHSPFPICQY-------TTHLSLPYRPRP 183
           +K E   E +  TP +S FP   FP  Q+         +LS+P  P P
Sbjct: 340 LKVEPAAEDLGATPPTSDFPPEEFPPFQHIRKGAFCDQYLSVPQHPYP 387

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>ZCHC8_CHICK (Q5F3D1) Zinc finger CCHC domain-containing protein 8|
          Length = 613

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/37 (43%), Positives = 16/37 (43%)
 Frame = +1

Query: 166 PYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDT 276
           P  P P     P P P  T   P  T R  TPTQP T
Sbjct: 361 PLPPGPPVISTPPPLPQGT---PPLTPRSLTPTQPST 394

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>RPOM_NEUCR (P38671) DNA-directed RNA polymerase, mitochondrial precursor (EC|
            2.7.7.6)
          Length = 1423

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +3

Query: 108  LHFPTQPFSHLPIH-DSSLTSLQTETQLHGRTRTRTQPNL 224
            L  PT+  SHLPIH D +   LQ    L G T    Q NL
Sbjct: 886  LEDPTKYVSHLPIHQDGTCNGLQHYAALGGDTWGAQQVNL 925

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>F19A3_MOUSE (Q7TPG6) Protein FAM19A3 precursor (Chemokine-like protein TAFA-3)|
          Length = 132

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
 Frame = -3

Query: 322 WECTVRPCVALSRCKLY--LVGWVCGVG 245
           W C + PC+    CK+   L GW C  G
Sbjct: 95  WWCQMEPCLLGEECKVLPDLSGWSCSSG 122

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>TATB_XANCP (Q8P3H9) Sec-independent protein translocase protein tatB homolog|
          Length = 195

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 20/62 (32%), Positives = 26/62 (41%)
 Frame = +1

Query: 118 PHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYNDSAR 297
           PH+P P        + P  P P  T  PAP  + T  S + T   H PT   T  + S +
Sbjct: 136 PHTPVPAPAPVVAQAQPMAPAPKQTLVPAPHGSLT--STQVT--THAPTASATASSTSPQ 191

Query: 298 RK 303
            K
Sbjct: 192 EK 193

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>F19A3_HUMAN (Q7Z5A8) Protein FAM19A3 precursor (Chemokine-like protein TAFA-3)|
          Length = 133

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
 Frame = -3

Query: 322 WECTVRPCVALSRCKLY--LVGWVCGVG 245
           W C + PC+    CK+   L GW C  G
Sbjct: 96  WWCQMEPCLPGEECKVLPDLSGWSCSSG 123

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>KRUP_DROME (P07247) Protein krueppel|
          Length = 502

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 23/99 (23%), Positives = 33/99 (33%), Gaps = 24/99 (24%)
 Frame = +1

Query: 97  TPASSIFPHSPFPIC----------QYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTH 246
           T A+++FPH+P  +              THL  P     +    P  +      SP  T 
Sbjct: 91  TLANTLFPHNPAALFGAWAAQQSLPPQGTHLHSPPASPHSPLSTPLGSGKHPLNSPNSTP 150

Query: 247 RHHTP--------------TQPDTVYNDSARRKDGPYTP 321
           +HH P              T+     ND      GP +P
Sbjct: 151 QHHEPAKKARKLSVKKEFQTEISMSVNDMYHTSGGPISP 189

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>ENV_MLVF5 (P03390) Env polyprotein precursor [Contains: Coat protein GP70;|
           Spike protein p15E; R protein]
          Length = 675

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = +1

Query: 118 PHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQP 270
           P  P P+      LSLP   RPN    PA +P  +  +P       TPTQP
Sbjct: 270 PIGPNPVL--ADQLSLP---RPNPLPKPAKSPPASNSTPTLISPSPTPTQP 315

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>AMSD_ERWAM (Q46634) Amylovoran biosynthesis glycosyl transferase amsD (EC|
           2.-.-.-)
          Length = 351

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/73 (24%), Positives = 31/73 (42%)
 Frame = +1

Query: 61  IKGESGRESVSCTPASSIFPHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRK 240
           I    G + V+ T +S +  H+ + +  Y+ +   PY P  N      P  +   F   +
Sbjct: 11  ISNSGGTDRVASTLSSLLSNHN-YDVTLYSLNSGEPYYPVDNKVSIRQPKSSMRLFKLFE 69

Query: 241 THRHHTPTQPDTV 279
             R+   T+PD V
Sbjct: 70  FIRYAKNTRPDGV 82

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>SPEN_DROME (Q8SX83) Protein split ends|
          Length = 5560

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
 Frame = +1

Query: 181  PNSTDAPAPAPN-----QTFFSPRKTHRHHTPTQPDTVYNDSARRKDGPYTPNDLTVAAS 345
            P+  D+  P+       Q+  SP K+  +++PT  +T   D    +  P   N+ T   S
Sbjct: 3425 PDEADSSGPSLKIDETVQSSSSPEKSISNNSPTPRETANIDIPNVESQPKLSNESTPQPS 3484

Query: 346  CVVALPVL 369
             +  LP L
Sbjct: 3485 VITKLPFL 3492

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>RPOC2_LOTJA (Q9BBS7) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)|
           (PEP) (Plastid-encoded RNA polymerase beta'' subunit)
           (RNA polymerase beta'' subunit)
          Length = 1332

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -1

Query: 159 EMSRVLANGKRAVWENGG-GRRTRYALPPTLAFYNLYSIIQGGDINRKYIV 10
           E  R  +NGK    EN     RTR+  P  L + +LY  I+  DI    I+
Sbjct: 350 EYVRSPSNGKIKFNENSAYPTRTRHGHPAFLCYIDLYVTIESNDIMHNVII 400

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>SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding factor-B)|
            (Transcription factor GATA-B) (dGATA-B) (Protein serpent)
          Length = 1264

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/67 (23%), Positives = 26/67 (38%)
 Frame = +1

Query: 85   SVSCTPASSIFPHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPT 264
            S S +P++    H   P  Q    L       PNS    +P   Q     +     H+P+
Sbjct: 948  STSLSPSAMSHQHQTHPHQQQQQQLCSGLDMSPNSNYQMSPLNMQQHQQQQSCSMQHSPS 1007

Query: 265  QPDTVYN 285
             P +++N
Sbjct: 1008 TPTSIFN 1014

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>IF2_DESPS (Q6AJY4) Translation initiation factor IF-2|
          Length = 939

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +1

Query: 166 PYRPRPNSTDAPA-PAPNQTFFSPRKTHRHHTPTQPDTVYNDSARRKD 306
           P RP  N +  P+ P+PN++   P K     TP Q D+       R+D
Sbjct: 255 PTRPPVNRSPRPSTPSPNRSAGGPPKPAAPATPAQDDSRNRKKKGRRD 302

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>ZCH14_HUMAN (Q8WYQ9) Zinc finger CCHC domain-containing protein 14 (BDG-29)|
          Length = 949

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 15/74 (20%)
 Frame = +1

Query: 94  CTPASSIFPHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFS-------------- 231
           C  +++  P S  P   +    +LP  P P+S+ A +  P  +F+S              
Sbjct: 701 CANSNTASPSS-HPSTSFANMATLPSCPAPSSSPALSSVPESSFYSSSGGGGSTGNIPAS 759

Query: 232 -PRKTHRHHTPTQP 270
            P   H HH    P
Sbjct: 760 NPNHHHHHHHQQPP 773

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>MED12_HUMAN (Q93074) Mediator of RNA polymerase II transcription subunit 12|
            (Thyroid hormone receptor-associated protein complex 230
            kDa component) (Trap230) (Activator-recruited cofactor
            240 kDa component) (ARC240) (CAG repeat protein 45)
            (OPA-containin
          Length = 2212

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
 Frame = +1

Query: 175  PRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYND--SARRKDGPY---TPNDL 330
            P P  TD P  AP  T    +K+ +    +QP T   D      + GPY    P DL
Sbjct: 1799 PEPPKTDKPGAAPPSTEERKKKSTKGKKRSQPATKTEDYGMGPGRSGPYGVTVPPDL 1855

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>CEBPA_RAT (P05554) CCAAT/enhancer-binding protein alpha (C/EBP alpha)|
          Length = 358

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
 Frame = +1

Query: 97  TPASSIFPHSPFPI--CQYTTHLSLPYRPRPNSTDAPAPAP 213
           +PA    PH  F I  C  TT    P  P P  T  P+P P
Sbjct: 193 SPAHLAAPHLQFQIAHCGQTTMHLQPGHPTPPPTPVPSPHP 233

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>MALE_PYRAB (Q9V297) Maltotriose-binding protein precursor|
           (Maltodextrin-binding protein) (MMBP)
          Length = 453

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = +3

Query: 162 TSLQTETQLHGRTRTRTQPNLFLT*KDAPTPHTHPTRYSLQRLSATQGRT 311
           T  QTETQ   +T+T T      T + +PT  T PT+ + Q  + T+  T
Sbjct: 27  TQTQTETQTPEKTQTPT------TTQPSPTTTTSPTQTTSQTPTETETHT 70

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>HPS4_MOUSE (Q99KG7) Hermansky-Pudlak syndrome 4 protein homolog (Light-ear|
           protein) (Le protein)
          Length = 671

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 151 THLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRH 252
           +H +LP   R   +  P+P+ ++T F P  + RH
Sbjct: 465 SHSALPRSSRSPDSPGPSPSADRTGFKPSPSGRH 498

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>SOCS1_MOUSE (O35716) Suppressor of cytokine signaling 1 (SOCS-1) (JAK-binding|
           protein) (JAB) (STAT-induced STAT inhibitor 1) (SSI-1)
          Length = 212

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +1

Query: 166 PYRPRPNSTDAPAPAPNQTFFSPRKTH 246
           P RPRP     PAPAP  T F   ++H
Sbjct: 37  PVRPRPCPA-VPAPAPGDTHFRTFRSH 62

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>OSBL9_HUMAN (Q96SU4) Oxysterol-binding protein-related protein 9 (OSBP-related|
           protein 9) (ORP-9)
          Length = 736

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 13/81 (16%)
 Frame = +1

Query: 88  VSCTPASSIFPHSPFPICQYTTH-LSLPY-----------RPRPNSTDAPAPAPNQTFFS 231
           +S  P+ ++ P  P  +C+      SLP             P PNST +    P+ +  S
Sbjct: 213 ISTMPSQTVLPPEPVQLCKSEQRPSSLPVGPVLATLGHHQTPTPNSTGSGHSPPSSSLTS 272

Query: 232 PRKTHRHHTP-TQPDTVYNDS 291
           P  +H + +P T P+  Y+ S
Sbjct: 273 P--SHVNLSPNTVPEFSYSSS 291

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>MARE2_MOUSE (Q8R001) Microtubule-associated protein RP/EB family member 2|
           (APC-binding protein EB2) (End-binding protein 2) (EB2)
          Length = 326

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +1

Query: 166 PYRPRPNSTDAPAPAPNQTFFS-PRKTHRHHTPTQPDTVYNDSARRKDGPYTPNDLTVAA 342
           P   R      P P P +  F+ P+K+H  ++PT      + +++    P  P+    A+
Sbjct: 168 PVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPASKPGSTPSRPSSAKRAS 227

Query: 343 S 345
           S
Sbjct: 228 S 228

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>MARE2_CHICK (Q5ZKK1) Microtubule-associated protein RP/EB family member 2|
          Length = 338

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +1

Query: 166 PYRPRPNSTDAPAPAPNQTFFS-PRKTHRHHTPTQPDTVYNDSARRKDGPYTPNDLTVAA 342
           P   R      P P P +  F+ P+K+H  ++PT      + +++    P  P+    AA
Sbjct: 169 PVEARQGQDALPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPASKPGSTPSRPSSAKKAA 228

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>GSH2_MOUSE (P31316) Homeobox protein GSH-2|
          Length = 305

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/52 (26%), Positives = 21/52 (40%)
 Frame = +1

Query: 202 APAPNQTFFSPRKTHRHHTPTQPDTVYNDSARRKDGPYTPNDLTVAASCVVA 357
           +PAP    F PR +H HH    P   ++    ++ G         AA+   A
Sbjct: 110 SPAPGDAQFCPRVSHAHHHHHPPQHHHHHHQPQQPGSAAAAAAAAAAAAAAA 161

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>PGK_MYCGA (Q7NBG7) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 413

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 138 NGKRAVWENGGGRRTRYALPPTLAFYNLYSIIQGGD 31
           NG   V+EN    R  Y +   ++  + YS+I GGD
Sbjct: 336 NGPLGVFENPNYERGSYEIAKAISESDSYSVIGGGD 371

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>DNMBP_HUMAN (Q6XZF7) Dynamin-binding protein (Scaffold protein Tuba)|
          Length = 1577

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = +3

Query: 81  GERILYACLLHFPTQPFSHLPIHDSSLTSLQ---TETQLHGRT 200
           GER L+ C+  F +Q   +LP+H   L  L    T   L GR+
Sbjct: 67  GER-LFVCICEFTSQELDNLPLHRGDLVILDGIPTAGWLQGRS 108

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>SPKC_SYNY3 (P74745) Serine/threonine-protein kinase C (EC 2.7.11.1)|
          Length = 535

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
 Frame = +1

Query: 91  SCTPASSIFPHSPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQP 270
           S  P  ++F  +P PI         P  P P  T +P+P+P +T  SP  T    TP +P
Sbjct: 390 SLEPRPNLF-ETPSPI-------PTPATPSPEPTPSPSPSP-ETTSSP--TEDTITPMEP 438

Query: 271 DTVYNDSARRKDGPYTPN-DLTVAASCVVALPV 366
           +   ++ A   +   +P+  ++   S  +++PV
Sbjct: 439 EPSLDEPAPIPEPKPSPSPTISPQPSPTISIPV 471

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>CENPC_HUMAN (Q03188) Centromere protein C 1 (CENP-C) (Centromere autoantigen C)|
          Length = 943

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
 Frame = +1

Query: 202 APAPNQTFFSPRKTHRHHTPTQPDTVYNDSARRKDGPY---TPNDLTV 336
           +PA +   F  RK+   H    P T+ ND    K  P     P+D TV
Sbjct: 333 SPAESTALFQGRKSREKHHNILPKTLANDKHSHKPHPVETSQPSDKTV 380

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>AGRN_RAT (P25304) Agrin precursor|
          Length = 1959

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
 Frame = +1

Query: 58   IIKGESGRESVSCTPASSIFPHSPFPICQYTTHLSLPYRPRPNSTDAPAP---APNQTFF 228
            +  G S   +   TP   +    PFP      H SLP  P   + D P P   +P+ T  
Sbjct: 868  VTPGASPTSASMTTPRHILSKTLPFP------HNSLPLSPGSTTHDWPTPLPISPHTTVS 921

Query: 229  SPRKT 243
             PR T
Sbjct: 922  IPRST 926

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = +1

Query: 127 PFPICQYTTHLSLP--YRPRPNSTDAPAPAPNQTFFSPR-KTHRHHTPT 264
           P PI   +  +  P  Y P P +   P P+P      P+  THRH  PT
Sbjct: 188 PTPIYSPSPQVQPPPTYSPPPPTHVQPTPSPPSRGHQPQPPTHRHAPPT 236


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,448,587
Number of Sequences: 219361
Number of extensions: 1046992
Number of successful extensions: 4162
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 3639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4074
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result