>gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0570A02,
              complete sequence
          Length = 146541

 Score =  280 bits (141), Expect = 1e-72
 Identities = 147/149 (98%)
 Strand = Plus / Minus

                                                                          
Query: 1      actagtaagcagcgcacagatcgcatatcatttgacttacagcatacacattaattcttc 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112183 actagtaagcagcgcacagatcgcatatcatttgacttacagcatacacattaattcttc 112124

                                                                          
Query: 61     aagtctcaacttggattacagcgagattaacgtgcgctcctccctaacacctttacgtca 120
              |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 112123 aagtctcaacttggattacagcgagattaacgtgcgctcctccctaacacctctacgtca 112064

                                           
Query: 121    catcccgtagttaaccggacgtaaagaga 149
              ||||||||||||||||||||||| |||||
Sbjct: 112063 catcccgtagttaaccggacgtagagaga 112035

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  280 bits (141), Expect = 1e-72
 Identities = 147/149 (98%)
 Strand = Plus / Minus

                                                                            
Query: 1        actagtaagcagcgcacagatcgcatatcatttgacttacagcatacacattaattcttc 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14032106 actagtaagcagcgcacagatcgcatatcatttgacttacagcatacacattaattcttc 14032047

                                                                            
Query: 61       aagtctcaacttggattacagcgagattaacgtgcgctcctccctaacacctttacgtca 120
                |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 14032046 aagtctcaacttggattacagcgagattaacgtgcgctcctccctaacacctctacgtca 14031987

                                             
Query: 121      catcccgtagttaaccggacgtaaagaga 149
                ||||||||||||||||||||||| |||||
Sbjct: 14031986 catcccgtagttaaccggacgtagagaga 14031958

>dbj|AK068459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151C17, full
            insert sequence
          Length = 3464

 Score =  280 bits (141), Expect = 1e-72
 Identities = 147/149 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1    actagtaagcagcgcacagatcgcatatcatttgacttacagcatacacattaattcttc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1740 actagtaagcagcgcacagatcgcatatcatttgacttacagcatacacattaattcttc 1681

                                                                        
Query: 61   aagtctcaacttggattacagcgagattaacgtgcgctcctccctaacacctttacgtca 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1680 aagtctcaacttggattacagcgagattaacgtgcgctcctccctaacacctctacgtca 1621

                                         
Query: 121  catcccgtagttaaccggacgtaaagaga 149
            ||||||||||||||||||||||| |||||
Sbjct: 1620 catcccgtagttaaccggacgtagagaga 1592

>dbj|AK059697.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-C04, full
            insert sequence
          Length = 1565

 Score =  280 bits (141), Expect = 1e-72
 Identities = 147/149 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1    actagtaagcagcgcacagatcgcatatcatttgacttacagcatacacattaattcttc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1541 actagtaagcagcgcacagatcgcatatcatttgacttacagcatacacattaattcttc 1482

                                                                        
Query: 61   aagtctcaacttggattacagcgagattaacgtgcgctcctccctaacacctttacgtca 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1481 aagtctcaacttggattacagcgagattaacgtgcgctcctccctaacacctctacgtca 1422

                                         
Query: 121  catcccgtagttaaccggacgtaaagaga 149
            ||||||||||||||||||||||| |||||
Sbjct: 1421 catcccgtagttaaccggacgtagagaga 1393

>gb|AY017989.1| Oryza sativa microsatellite MRG0314 containing (AG)X19, closest to
           marker Y2820R, genomic sequence
          Length = 238

 Score =  196 bits (99), Expect = 1e-47
 Identities = 105/107 (98%)
 Strand = Plus / Plus

                                                                       
Query: 43  catacacattaattcttcaagtctcaacttggattacagcgagattaacgtgcgctcctc 102
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   catacacattaattcttcaagtctcaacttggattacagcgagattaacgtgcgctcctc 60

                                                          
Query: 103 cctaacacctttacgtcacatcccgtagttaaccggacgtaaagaga 149
           |||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 61  cctaacacctctacgtcacatcccgtagttaaccggacgtagagaga 107

>gb|AY022144.1| Oryza sativa microsatellite MRG4469 containing (TC)X19, closest to
           marker Y2820R, genomic sequence
          Length = 238

 Score =  194 bits (98), Expect = 5e-47
 Identities = 104/106 (98%)
 Strand = Plus / Minus

                                                                       
Query: 44  atacacattaattcttcaagtctcaacttggattacagcgagattaacgtgcgctcctcc 103
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 atacacattaattcttcaagtctcaacttggattacagcgagattaacgtgcgctcctcc 179

                                                         
Query: 104 ctaacacctttacgtcacatcccgtagttaaccggacgtaaagaga 149
           ||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 178 ctaacacctctacgtcacatcccgtagttaaccggacgtagagaga 133

>gb|AY916493.1| Oryza sativa (japonica cultivar-group) cathepsin B-like cysteine
            protease mRNA, complete cds
          Length = 1475

 Score =  109 bits (55), Expect = 2e-21
 Identities = 61/63 (96%)
 Strand = Plus / Minus

                                                                        
Query: 87   ttaacgtgcgctcctccctaacacctttacgtcacatcccgtagttaaccggacgtaaag 146
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 1475 ttaacgtgcgctcctccctaacacctctacgtcacatcccgtagttaaccggacgtagag 1416

               
Query: 147  aga 149
            |||
Sbjct: 1415 aga 1413

>emb|BX927297.12| Zebrafish DNA sequence from clone DKEY-238M4 in linkage group 16,
             complete sequence
          Length = 132039

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 37    ttacagcatacacattaattct 58
             ||||||||||||||||||||||
Sbjct: 76017 ttacagcatacacattaattct 75996

>gb|AC018375.8| Homo sapiens, clone RP11-3P24, complete sequence
          Length = 149951

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 102   ccctaacacctttacgtcaca 122
             |||||||||||||||||||||
Sbjct: 33691 ccctaacacctttacgtcaca 33711

>gb|AC090893.5| Homo sapiens chromosome 11, clone RP11-390G21, complete sequence
          Length = 191524

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 102   ccctaacacctttacgtcaca 122
             |||||||||||||||||||||
Sbjct: 80473 ccctaacacctttacgtcaca 80453

>gb|AC107401.5| Homo sapiens BAC clone RP11-813N20 from 4, complete sequence
          Length = 104079

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    attaattcttcaagtctcaa 69
             ||||||||||||||||||||
Sbjct: 56750 attaattcttcaagtctcaa 56769

>gb|AC182428.2| Pan troglodytes BAC clone CH251-637G21 from chromosome 4, complete
             sequence
          Length = 210098

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    attaattcttcaagtctcaa 69
             ||||||||||||||||||||
Sbjct: 17258 attaattcttcaagtctcaa 17277

>gb|AC111000.3| Homo sapiens BAC clone RP13-644M16 from 4, complete sequence
          Length = 156578

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    attaattcttcaagtctcaa 69
             ||||||||||||||||||||
Sbjct: 19307 attaattcttcaagtctcaa 19326

>gb|AC084661.1|CBRG46O12 Caenorhabditis briggsae cosmid G46O12, complete sequence
          Length = 43197

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    ttcttcaagtctcaacttgg 74
             ||||||||||||||||||||
Sbjct: 27601 ttcttcaagtctcaacttgg 27582

>dbj|AK116268.1| Ciona intestinalis cDNA, clone:citb028l21, full insert sequence
          Length = 1536

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 31 tttgacttacagcatacaca 50
          ||||||||||||||||||||
Sbjct: 97 tttgacttacagcatacaca 78

>gb|AC153010.3| Mus musculus BAC clone RP23-325H1 from chromosome 15, complete sequence
          Length = 230097

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     tcatttgacttacagcata 46
              |||||||||||||||||||
Sbjct: 211070 tcatttgacttacagcata 211088

>gb|AC142474.4| Mus musculus BAC clone RP24-362N7 from chromosome 15, complete sequence
          Length = 172879

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    tcatttgacttacagcata 46
             |||||||||||||||||||
Sbjct: 80402 tcatttgacttacagcata 80420

>emb|AL139239.18| Human DNA sequence from clone RP11-19C6 on chromosome 10 Contains the 5'
              end of the CRTAC1 gene for cartilage acidic protein 1 and
              two CpG islands, complete sequence
          Length = 161235

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 44     atacacattaattcttcaa 62
              |||||||||||||||||||
Sbjct: 151371 atacacattaattcttcaa 151389

>gb|AC093298.3| Homo sapiens chromosome 5 clone RP11-543L14, complete sequence
          Length = 198687

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 54     attcttcaagtctcaactt 72
              |||||||||||||||||||
Sbjct: 146193 attcttcaagtctcaactt 146211

>gb|AC146706.8| Medicago truncatula clone mth2-108g5, complete sequence
          Length = 106753

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 47    cacattaattcttcaagtctcaa 69
             |||||||||| ||||||||||||
Sbjct: 65316 cacattaattattcaagtctcaa 65338

>gb|AC010157.12| Homo sapiens chromosome 10 clone RP11-202D18, complete sequence
          Length = 160310

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     acattaattcttcaagtct 66
              |||||||||||||||||||
Sbjct: 148192 acattaattcttcaagtct 148210

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 85      gattaacgtgcgctcctcc 103
               |||||||||||||||||||
Sbjct: 5805665 gattaacgtgcgctcctcc 5805647

>gb|AC079602.15| Homo sapiens 12 BAC RP11-216P16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172008

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    atatcatttgacttacagc 43
             |||||||||||||||||||
Sbjct: 28840 atatcatttgacttacagc 28858

>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0701E03
          Length = 183245

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 85     gattaacgtgcgctcctcc 103
              |||||||||||||||||||
Sbjct: 121194 gattaacgtgcgctcctcc 121176

>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0537F07
          Length = 147724

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 85   gattaacgtgcgctcctcc 103
            |||||||||||||||||||
Sbjct: 6440 gattaacgtgcgctcctcc 6422

>emb|Z98941.2|HS204E5 Human DNA sequence from clone XX-204E5 on chromosome 12, complete
             sequence
          Length = 129192

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 25    atatcatttgacttacagc 43
             |||||||||||||||||||
Sbjct: 70975 atatcatttgacttacagc 70957


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 842,418
Number of Sequences: 3902068
Number of extensions: 842418
Number of successful extensions: 54684
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54617
Number of HSP's gapped (non-prelim): 67
length of query: 149
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 128
effective length of database: 17,151,101,840
effective search space: 2195341035520
effective search space used: 2195341035520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)