>ref|NM_188605.1| Oryza sativa (japonica cultivar-group), Ozsa8208 predicted mRNA
          Length = 996

 Score =  168 bits (85), Expect = 9e-39
 Identities = 172/201 (85%)
 Strand = Plus / Minus

                                                                       
Query: 186 cgagcagcggcacgaacttgagcatgacttggacggcgttcttggcggcgatgtcaatga 245
           |||| ||||| ||||| ||||||||||| | ||||||||||| |||||||||| | | ||
Sbjct: 952 cgaggagcgggacgaagttgagcatgacgtcgacggcgttctgggcggcgatggcgagga 893

                                                                       
Query: 246 aggtgctggcctcgttcccgagcgcggagcctcccccggcgaggtcggagagcgagcgga 305
           |   || ||||||||| ||||||| |||||| || || |||||||||||||| |||||||
Sbjct: 892 actcgccggcctcgttgccgagcgaggagccgccgccagcgaggtcggagagggagcgga 833

                                                                       
Query: 306 tggtgaggaacggcaccccctgcgtgtgcgccacgagggccacggcagcgctctccatct 365
           ||||||||||||| ||  | |||  |||||||||||| |||||||| |||||||||||||
Sbjct: 832 tggtgaggaacgggacggcgtgctggtgcgccacgagcgccacggcggcgctctccatct 773

                                
Query: 366 ccacgggggtgcacccgaact 386
           |||| || |||||||||||||
Sbjct: 772 ccaccggcgtgcacccgaact 752

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  168 bits (85), Expect = 9e-39
 Identities = 172/201 (85%)
 Strand = Plus / Plus

                                                                           
Query: 186     cgagcagcggcacgaacttgagcatgacttggacggcgttcttggcggcgatgtcaatga 245
               |||| ||||| ||||| ||||||||||| | ||||||||||| |||||||||| | | ||
Sbjct: 7184527 cgaggagcgggacgaagttgagcatgacgtcgacggcgttctgggcggcgatggcgagga 7184586

                                                                           
Query: 246     aggtgctggcctcgttcccgagcgcggagcctcccccggcgaggtcggagagcgagcgga 305
               |   || ||||||||| ||||||| |||||| || || |||||||||||||| |||||||
Sbjct: 7184587 actcgccggcctcgttgccgagcgaggagccgccgccagcgaggtcggagagggagcgga 7184646

                                                                           
Query: 306     tggtgaggaacggcaccccctgcgtgtgcgccacgagggccacggcagcgctctccatct 365
               ||||||||||||| ||  | |||  |||||||||||| |||||||| |||||||||||||
Sbjct: 7184647 tggtgaggaacgggacggcgtgctggtgcgccacgagcgccacggcggcgctctccatct 7184706

                                    
Query: 366     ccacgggggtgcacccgaact 386
               |||| || |||||||||||||
Sbjct: 7184707 ccaccggcgtgcacccgaact 7184727

>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485D09
          Length = 150594

 Score =  168 bits (85), Expect = 9e-39
 Identities = 172/201 (85%)
 Strand = Plus / Plus

                                                                         
Query: 186   cgagcagcggcacgaacttgagcatgacttggacggcgttcttggcggcgatgtcaatga 245
             |||| ||||| ||||| ||||||||||| | ||||||||||| |||||||||| | | ||
Sbjct: 79175 cgaggagcgggacgaagttgagcatgacgtcgacggcgttctgggcggcgatggcgagga 79234

                                                                         
Query: 246   aggtgctggcctcgttcccgagcgcggagcctcccccggcgaggtcggagagcgagcgga 305
             |   || ||||||||| ||||||| |||||| || || |||||||||||||| |||||||
Sbjct: 79235 actcgccggcctcgttgccgagcgaggagccgccgccagcgaggtcggagagggagcgga 79294

                                                                         
Query: 306   tggtgaggaacggcaccccctgcgtgtgcgccacgagggccacggcagcgctctccatct 365
             ||||||||||||| ||  | |||  |||||||||||| |||||||| |||||||||||||
Sbjct: 79295 tggtgaggaacgggacggcgtgctggtgcgccacgagcgccacggcggcgctctccatct 79354

                                  
Query: 366   ccacgggggtgcacccgaact 386
             |||| || |||||||||||||
Sbjct: 79355 ccaccggcgtgcacccgaact 79375

>gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_C10,
              complete sequence
          Length = 138209

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                          
Query: 268    cgcggagcctcccccggcgaggtcggagagcgagcggatggtgaggaacggcaccccctg 327
              ||||||||| || |||||||||||||||||||| || |||| || ||||||| |||||||
Sbjct: 111726 cgcggagccgccgccggcgaggtcggagagcgaccgtatggcgatgaacggcgccccctg 111785

               
Query: 328    c 328
              |
Sbjct: 111786 c 111786

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                           
Query: 268     cgcggagcctcccccggcgaggtcggagagcgagcggatggtgaggaacggcaccccctg 327
               ||||||||| || |||||||||||||||||||| || |||| || ||||||| |||||||
Sbjct: 7675331 cgcggagccgccgccggcgaggtcggagagcgaccgtatggcgatgaacggcgccccctg 7675390

                
Query: 328     c 328
               |
Sbjct: 7675391 c 7675391

>dbj|AK101642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055L05, full
            insert sequence
          Length = 1387

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                        
Query: 268  cgcggagcctcccccggcgaggtcggagagcgagcggatggtgaggaacggcaccccctg 327
            ||||||||| || |||||||||||||||||||| || |||| || ||||||| |||||||
Sbjct: 1142 cgcggagccgccgccggcgaggtcggagagcgaccgtatggcgatgaacggcgccccctg 1083

             
Query: 328  c 328
            |
Sbjct: 1082 c 1082

>dbj|AK064229.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-H04, full
            insert sequence
          Length = 1470

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                        
Query: 268  cgcggagcctcccccggcgaggtcggagagcgagcggatggtgaggaacggcaccccctg 327
            ||||||||| || |||||||||||||||||||| || |||| || ||||||| |||||||
Sbjct: 1225 cgcggagccgccgccggcgaggtcggagagcgaccgtatggcgatgaacggcgccccctg 1166

             
Query: 328  c 328
            |
Sbjct: 1165 c 1165

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 145     gtccgcggccgcgccgtcgtcc 166
               ||||||||||||||||||||||
Sbjct: 1696642 gtccgcggccgcgccgtcgtcc 1696663

>gb|BC095614.1| Danio rerio NADH dehydrogenase (ubiquinone) Fe-S protein 5, mRNA
           (cDNA clone MGC:111955 IMAGE:7248997), complete cds
          Length = 541

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 115 tggacaagtggctgctggctca 136
           ||||||||||||||||||||||
Sbjct: 110 tggacaagtggctgctggctca 131

>ref|NM_001020633.1| Danio rerio NADH dehydrogenase (ubiquinone) Fe-S protein 5
           (ndufs5), mRNA
          Length = 541

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 115 tggacaagtggctgctggctca 136
           ||||||||||||||||||||||
Sbjct: 110 tggacaagtggctgctggctca 131

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 145     gtccgcggccgcgccgtcgtcc 166
               ||||||||||||||||||||||
Sbjct: 3031532 gtccgcggccgcgccgtcgtcc 3031553

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 145     gtccgcggccgcgccgtcgtcc 166
               ||||||||||||||||||||||
Sbjct: 2180357 gtccgcggccgcgccgtcgtcc 2180378

>emb|CR753876.17| Zebrafish DNA sequence from clone DKEYP-116A7 in linkage group 19,
             complete sequence
          Length = 118451

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 115   tggacaagtggctgctggctca 136
             ||||||||||||||||||||||
Sbjct: 57921 tggacaagtggctgctggctca 57900

>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 279     ccccggcgaggtcggagagcg 299
               |||||||||||||||||||||
Sbjct: 1023950 ccccggcgaggtcggagagcg 1023930

>gb|AC125446.12| Mus musculus chromosome 14, clone RP24-501J23, complete sequence
          Length = 159722

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1      ggctcatcaactgtgatttga 21
              |||||||||||||||||||||
Sbjct: 140859 ggctcatcaactgtgatttga 140879

>gb|AF328738.1|AF328738 Agelaius phoeniceus cosmid Rwcos3, partial sequence
          Length = 45375

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 265   gagcgcggagcctcccccggc 285
             |||||||||||||||||||||
Sbjct: 16121 gagcgcggagcctcccccggc 16101

>ref|XM_469921.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1369

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 cggcgaggtcggagagcgag 301
           ||||||||||||||||||||
Sbjct: 391 cggcgaggtcggagagcgag 372

>gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Syntenic To Homo sapiens
              22q11.2 DGCR Region, complete sequence
          Length = 262062

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 305    atggtgaggaacggcaccccctgc 328
              |||||||||||||| |||||||||
Sbjct: 206897 atggtgaggaacgggaccccctgc 206874

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 282      cggcgaggtcggagagcgag 301
                ||||||||||||||||||||
Sbjct: 32498522 cggcgaggtcggagagcgag 32498541

>gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, complete sequence
          Length = 202128

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 305    atggtgaggaacggcaccccctgc 328
              |||||||||||||| |||||||||
Sbjct: 193483 atggtgaggaacgggaccccctgc 193460

>gb|AY224542.1| Oryza sativa (japonica cultivar-group) isolate 23484 heavy
           meromyosin-like protein mRNA, complete cds
          Length = 1071

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 cggcgaggtcggagagcgag 301
           ||||||||||||||||||||
Sbjct: 391 cggcgaggtcggagagcgag 372

>ref|XM_534485.2| PREDICTED: Canis familiaris similar to thrombospondin type I
            domain-containing 1 isoform 1 (LOC477293), mRNA
          Length = 2824

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 144  tgtccgcggccgcgccgtcg 163
            ||||||||||||||||||||
Sbjct: 1777 tgtccgcggccgcgccgtcg 1758

>gb|AC134384.6| Mus musculus strain C57BL/6J clone rp23-393d21, complete sequence
          Length = 227620

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 305    atggtgaggaacggcaccccctgc 328
              |||||||||||||| |||||||||
Sbjct: 210073 atggtgaggaacgggaccccctgc 210096

>gb|AC134383.11| Mus musculus strain C57BL/6J clone rp23-348k4, complete sequence
          Length = 227587

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 305    atggtgaggaacggcaccccctgc 328
              |||||||||||||| |||||||||
Sbjct: 210040 atggtgaggaacgggaccccctgc 210063

>emb|BX063779.1|CNS09LDJ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC45DC05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 930

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 188 agcagcggcacgaacttgagcatg 211
           |||||||| |||||||||||||||
Sbjct: 646 agcagcggaacgaacttgagcatg 669

>gb|AC163199.8| Mus musculus 6 BAC RP23-333F8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 233589

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 336    ccacgagggccacggcagcg 355
              ||||||||||||||||||||
Sbjct: 131205 ccacgagggccacggcagcg 131186

>gb|AC008019.60| Mus musculus strain 129S6/SvEvTac chromosome 16 clone rp21-519i24,
             complete sequence
          Length = 189707

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 305   atggtgaggaacggcaccccctgc 328
             |||||||||||||| |||||||||
Sbjct: 81926 atggtgaggaacgggaccccctgc 81903

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 154     cgcgccgtcgtccatctcct 173
               ||||||||||||||||||||
Sbjct: 1294753 cgcgccgtcgtccatctcct 1294772

>gb|AE012392.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 300
            of 460 of the complete genome
          Length = 10825

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 154  cgcgccgtcgtccatctcct 173
            ||||||||||||||||||||
Sbjct: 5403 cgcgccgtcgtccatctcct 5384

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 154     cgcgccgtcgtccatctcct 173
               ||||||||||||||||||||
Sbjct: 1603085 cgcgccgtcgtccatctcct 1603104

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 282      cggcgaggtcggagagcgag 301
                ||||||||||||||||||||
Sbjct: 32589032 cggcgaggtcggagagcgag 32589051

>gb|AC133574.15| Mus musculus strain C57BL/6J clone rp23-35b9, complete sequence
          Length = 168432

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 305    atggtgaggaacggcaccccctgc 328
              |||||||||||||| |||||||||
Sbjct: 125413 atggtgaggaacgggaccccctgc 125390

>gb|AC087096.11| Oryza sativa chromosome 3 BAC OSJNBa0087O09 genomic sequence, complete
             sequence
          Length = 119134

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   cggcgaggtcggagagcgag 301
             ||||||||||||||||||||
Sbjct: 31971 cggcgaggtcggagagcgag 31990

>dbj|AK071787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110P10, full
           insert sequence
          Length = 1524

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 cggcgaggtcggagagcgag 301
           ||||||||||||||||||||
Sbjct: 546 cggcgaggtcggagagcgag 527

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 154     cgcgccgtcgtccatctcct 173
               ||||||||||||||||||||
Sbjct: 1318531 cgcgccgtcgtccatctcct 1318550


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,516,439
Number of Sequences: 3902068
Number of extensions: 2516439
Number of successful extensions: 44774
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44200
Number of HSP's gapped (non-prelim): 568
length of query: 415
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 393
effective length of database: 17,147,199,772
effective search space: 6738849510396
effective search space used: 6738849510396
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)