| Clone Name | rbaet119e08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY120886.1| Hordeum vulgare RNase S-like protein mRNA, complete cds Length = 905 Score = 622 bits (314), Expect = e-175 Identities = 341/350 (97%) Strand = Plus / Minus Query: 123 gcatataggaaagacatagcacaatataatggtccagagttcaggccacagtagcaggta 182 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 870 gcatataggaaaaacatagcacaatataatggtccagagttcaggccacaatagcaggta 811 Query: 183 gtttcagttgaggcaccggccgagcgggtggctcttaggcctcggtgggcaaggtgatct 242 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 810 gtttcagttgaggcatcggccgagcgggtggctcttaggcctcggtgggcaacgtgatct 751 Query: 243 tggcggacgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcgg 302 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 tggcgggcgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcgg 691 Query: 303 ggcagcgcaacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgc 362 ||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 690 ggcagtgcaacttgggcagcttggggcagtcgatgaagatctggccgtccttgtcgacgc 631 Query: 363 agaggtagatctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccg 422 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 630 agaggtagatctggtagagctgcttcttgccgaacggcccgtccctgcactgcacccccg 571 Query: 423 gcattactcccagcttctggttcaccgcccatttgatgtgctccgtgttg 472 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 gcattactcccagcttctggttcaccgcccatttgatgtgctccgtgttg 521
>gb|BT009061.1| Triticum aestivum clone wds1c.pk001.m19.f:fis, full insert mRNA sequence Length = 1062 Score = 353 bits (178), Expect = 3e-94 Identities = 274/306 (89%) Strand = Plus / Minus Query: 164 caggccacagtagcaggtagtttcagttgaggcaccggccgagcgggtggctcttaggcc 223 ||||||||||||| | ||| | ||| |||||| |||| || ||||||| ||| ||||| Sbjct: 834 caggccacagtagtacgtactctcaagtgaggcgccggtcggccgggtgggtctcaggcc 775 Query: 224 tcggtgggcaaggtgatcttggcggacgatgtggcgttgagcatccaggtgtggaaggga 283 || |||||||| |||||||||| | ||||||||||||||||||||| ||||||||||| Sbjct: 774 tcagtgggcaacatgatcttggcaggcgatgtggcgttgagcatccacgtgtggaagggg 715 Query: 284 tggaagaggacctcctcggggcagcgcaacttgggcagcttggggcagtcgatgaaggtc 343 ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||| Sbjct: 714 tggaagaggacctcctcagggcaatgcagtttgggcagcttggggcagtcgatgaaggtc 655 Query: 344 ttgccgtccttgtcgacgcagaggtagatctggtagagctgcttcttgccgaacggcccg 403 | ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 654 tcgccgttcttgtcgacgcagaggtagatctggtagagctgcttcttgccgaatggcccg 595 Query: 404 tccttgcactgcacccccggcattactcccagcttctggttcaccgcccatttgatgtgc 463 ||| ||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||| Sbjct: 594 tccctgcactgcaccccgggcatcactccaagcttctggttcaccgcccacttgatgtgc 535 Query: 464 tccgtg 469 |||||| Sbjct: 534 tccgtg 529 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 11 taatagaactgtttattcatatacttcacgtatta 45 ||||| ||||||| ||||||||||||||||||||| Sbjct: 1031 taataaaactgttcattcatatacttcacgtatta 997
>gb|AF495872.1| Triticum aestivum S-like RNase mRNA, complete cds Length = 901 Score = 339 bits (171), Expect = 5e-90 Identities = 252/279 (90%) Strand = Plus / Minus Query: 191 tgaggcaccggccgagcgggtggctcttaggcctcggtgggcaaggtgatcttggcggac 250 |||||| ||||||| ||||||| ||| | ||||| |||||||| |||||||||| | | Sbjct: 797 tgaggcgccggccggccgggtgggtctcacgcctcagtgggcaacatgatcttggcaggc 738 Query: 251 gatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcgc 310 |||||||||||||||||||| |||||||| || ||||||||||||||||| ||||| || Sbjct: 737 gatgtggcgttgagcatccacgtgtggaacgggtggaagaggacctcctcagggcaatgc 678 Query: 311 aacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggtag 370 | ||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 677 agtttgggcagcttggggcagtcgatgatggtctcgccgttcttgtcgacgcagaggtag 618 Query: 371 atctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccggcattact 430 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||| Sbjct: 617 atctggtagagctgcttcttgccgaacggcccgtccctgcactgcaccccaggcatcact 558 Query: 431 cccagcttctggttcaccgcccatttgatgtgctccgtg 469 || |||||||||||||||||||| ||||||||||||||| Sbjct: 557 ccaagcttctggttcaccgcccacttgatgtgctccgtg 519
>gb|AY056038.1| Oryza sativa RNase S-like protein mRNA, complete cds Length = 999 Score = 172 bits (87), Expect = 7e-40 Identities = 180/211 (85%) Strand = Plus / Minus Query: 250 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 309 |||||||| ||||||||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct: 731 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 672 Query: 310 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 369 | |||||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 671 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 612 Query: 370 gatctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccggcattac 429 ||||| ||| | ||||||||| || || ||||||||| |||||||||| || || | || Sbjct: 611 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactgcactcctggtgtcac 552 Query: 430 tcccagcttctggttcaccgcccatttgatg 460 ||||||||||||||||| ||||| |||||| Sbjct: 551 acccagcttctggttcactgcccacttgatg 521
>gb|AF439449.1|AF439449 Oryza sativa RNase S-like protein gene, complete cds Length = 1909 Score = 172 bits (87), Expect = 7e-40 Identities = 180/211 (85%) Strand = Plus / Minus Query: 250 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 309 |||||||| ||||||||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct: 1642 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 1583 Query: 310 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 369 | |||||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 1582 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 1523 Query: 370 gatctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccggcattac 429 ||||| ||| | ||||||||| || || ||||||||| |||||||||| || || | || Sbjct: 1522 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactgcactcctggtgtcac 1463 Query: 430 tcccagcttctggttcaccgcccatttgatg 460 ||||||||||||||||| ||||| |||||| Sbjct: 1462 acccagcttctggttcactgcccacttgatg 1432
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 172 bits (87), Expect = 7e-40 Identities = 180/211 (85%) Strand = Plus / Plus Query: 250 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 309 |||||||| ||||||||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct: 20854870 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 20854929 Query: 310 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 369 | |||||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 20854930 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 20854989 Query: 370 gatctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccggcattac 429 ||||| ||| | ||||||||| || || ||||||||| |||||||||| || || | || Sbjct: 20854990 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactgcactcctggtgtcac 20855049 Query: 430 tcccagcttctggttcaccgcccatttgatg 460 ||||||||||||||||| ||||| |||||| Sbjct: 20855050 acccagcttctggttcactgcccacttgatg 20855080
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 172 bits (87), Expect = 7e-40 Identities = 180/211 (85%) Strand = Plus / Plus Query: 250 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 309 |||||||| ||||||||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct: 47096 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 47155 Query: 310 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 369 | |||||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 47156 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 47215 Query: 370 gatctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccggcattac 429 ||||| ||| | ||||||||| || || ||||||||| |||||||||| || || | || Sbjct: 47216 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactgcactcctggtgtcac 47275 Query: 430 tcccagcttctggttcaccgcccatttgatg 460 ||||||||||||||||| ||||| |||||| Sbjct: 47276 acccagcttctggttcactgcccacttgatg 47306
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 172 bits (87), Expect = 7e-40 Identities = 180/211 (85%) Strand = Plus / Plus Query: 250 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 309 |||||||| ||||||||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct: 129899 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 129958 Query: 310 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 369 | |||||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 129959 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 130018 Query: 370 gatctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccggcattac 429 ||||| ||| | ||||||||| || || ||||||||| |||||||||| || || | || Sbjct: 130019 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactgcactcctggtgtcac 130078 Query: 430 tcccagcttctggttcaccgcccatttgatg 460 ||||||||||||||||| ||||| |||||| Sbjct: 130079 acccagcttctggttcactgcccacttgatg 130109
>dbj|AK119186.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G06, full insert sequence Length = 930 Score = 172 bits (87), Expect = 7e-40 Identities = 180/211 (85%) Strand = Plus / Minus Query: 250 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 309 |||||||| ||||||||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct: 772 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 713 Query: 310 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 369 | |||||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 712 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 653 Query: 370 gatctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccggcattac 429 ||||| ||| | ||||||||| || || ||||||||| |||||||||| || || | || Sbjct: 652 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactgcactcctggtgtcac 593 Query: 430 tcccagcttctggttcaccgcccatttgatg 460 ||||||||||||||||| ||||| |||||| Sbjct: 592 acccagcttctggttcactgcccacttgatg 562
>dbj|AK104888.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B11, full insert sequence Length = 997 Score = 172 bits (87), Expect = 7e-40 Identities = 180/211 (85%) Strand = Plus / Minus Query: 250 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 309 |||||||| ||||||||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct: 768 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 709 Query: 310 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 369 | |||||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 708 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 649 Query: 370 gatctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccggcattac 429 ||||| ||| | ||||||||| || || ||||||||| |||||||||| || || | || Sbjct: 648 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactgcactcctggtgtcac 589 Query: 430 tcccagcttctggttcaccgcccatttgatg 460 ||||||||||||||||| ||||| |||||| Sbjct: 588 acccagcttctggttcactgcccacttgatg 558
>dbj|AK104599.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G01, full insert sequence Length = 1065 Score = 172 bits (87), Expect = 7e-40 Identities = 180/211 (85%) Strand = Plus / Minus Query: 250 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 309 |||||||| ||||||||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct: 768 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 709 Query: 310 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 369 | |||||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 708 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 649 Query: 370 gatctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccggcattac 429 ||||| ||| | ||||||||| || || ||||||||| |||||||||| || || | || Sbjct: 648 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactgcactcctggtgtcac 589 Query: 430 tcccagcttctggttcaccgcccatttgatg 460 ||||||||||||||||| ||||| |||||| Sbjct: 588 acccagcttctggttcactgcccacttgatg 558
>dbj|AK104553.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-E10, full insert sequence Length = 1068 Score = 172 bits (87), Expect = 7e-40 Identities = 180/211 (85%) Strand = Plus / Minus Query: 250 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 309 |||||||| ||||||||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct: 768 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 709 Query: 310 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 369 | |||||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 708 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 649 Query: 370 gatctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccggcattac 429 ||||| ||| | ||||||||| || || ||||||||| |||||||||| || || | || Sbjct: 648 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactgcactcctggtgtcac 589 Query: 430 tcccagcttctggttcaccgcccatttgatg 460 ||||||||||||||||| ||||| |||||| Sbjct: 588 acccagcttctggttcactgcccacttgatg 558
>dbj|AK104509.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G12, full insert sequence Length = 1069 Score = 172 bits (87), Expect = 7e-40 Identities = 180/211 (85%) Strand = Plus / Minus Query: 250 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 309 |||||||| ||||||||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct: 772 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 713 Query: 310 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 369 | |||||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 712 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 653 Query: 370 gatctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccggcattac 429 ||||| ||| | ||||||||| || || ||||||||| |||||||||| || || | || Sbjct: 652 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactgcactcctggtgtcac 593 Query: 430 tcccagcttctggttcaccgcccatttgatg 460 ||||||||||||||||| ||||| |||||| Sbjct: 592 acccagcttctggttcactgcccacttgatg 562
>dbj|AK104656.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C11, full insert sequence Length = 1069 Score = 172 bits (87), Expect = 7e-40 Identities = 180/211 (85%) Strand = Plus / Minus Query: 250 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 309 |||||||| ||||||||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct: 772 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 713 Query: 310 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 369 | |||||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 712 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 653 Query: 370 gatctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccggcattac 429 ||||| ||| | ||||||||| || || ||||||||| |||||||||| || || | || Sbjct: 652 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactgcactcctggtgtcac 593 Query: 430 tcccagcttctggttcaccgcccatttgatg 460 ||||||||||||||||| ||||| |||||| Sbjct: 592 acccagcttctggttcactgcccacttgatg 562
>dbj|AK104454.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A06, full insert sequence Length = 1068 Score = 172 bits (87), Expect = 7e-40 Identities = 180/211 (85%) Strand = Plus / Minus Query: 250 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 309 |||||||| ||||||||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct: 768 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 709 Query: 310 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 369 | |||||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 708 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 649 Query: 370 gatctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccggcattac 429 ||||| ||| | ||||||||| || || ||||||||| |||||||||| || || | || Sbjct: 648 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactgcactcctggtgtcac 589 Query: 430 tcccagcttctggttcaccgcccatttgatg 460 ||||||||||||||||| ||||| |||||| Sbjct: 588 acccagcttctggttcactgcccacttgatg 558
>dbj|AK104221.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E03, full insert sequence Length = 1069 Score = 172 bits (87), Expect = 7e-40 Identities = 180/211 (85%) Strand = Plus / Minus Query: 250 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 309 |||||||| ||||||||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct: 772 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 713 Query: 310 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 369 | |||||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 712 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 653 Query: 370 gatctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccggcattac 429 ||||| ||| | ||||||||| || || ||||||||| |||||||||| || || | || Sbjct: 652 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactgcactcctggtgtcac 593 Query: 430 tcccagcttctggttcaccgcccatttgatg 460 ||||||||||||||||| ||||| |||||| Sbjct: 592 acccagcttctggttcactgcccacttgatg 562
>dbj|AK098949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057M18, full insert sequence Length = 1052 Score = 172 bits (87), Expect = 7e-40 Identities = 180/211 (85%) Strand = Plus / Minus Query: 250 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 309 |||||||| ||||||||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct: 772 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 713 Query: 310 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 369 | |||||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 712 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 653 Query: 370 gatctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccggcattac 429 ||||| ||| | ||||||||| || || ||||||||| |||||||||| || || | || Sbjct: 652 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactgcactcctggtgtcac 593 Query: 430 tcccagcttctggttcaccgcccatttgatg 460 ||||||||||||||||| ||||| |||||| Sbjct: 592 acccagcttctggttcactgcccacttgatg 562
>dbj|AK061438.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B06, full insert sequence Length = 1072 Score = 172 bits (87), Expect = 7e-40 Identities = 180/211 (85%) Strand = Plus / Minus Query: 250 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 309 |||||||| ||||||||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct: 772 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 713 Query: 310 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 369 | |||||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 712 gaggttgggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 653 Query: 370 gatctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccggcattac 429 ||||| ||| | ||||||||| || || ||||||||| |||||||||| || || | || Sbjct: 652 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactgcactcctggtgtcac 593 Query: 430 tcccagcttctggttcaccgcccatttgatg 460 ||||||||||||||||| ||||| |||||| Sbjct: 592 acccagcttctggttcactgcccacttgatg 562
>gb|AY061961.1| Oryza sativa drought-induced S-like ribonuclease mRNA, complete cds Length = 1050 Score = 165 bits (83), Expect = 2e-37 Identities = 179/211 (84%) Strand = Plus / Minus Query: 250 cgatgtggcgttgagcatccaggtgtggaagggatggaagaggacctcctcggggcagcg 309 |||||||| ||||||||||||||||||||| ||||||||||| ||||| | ||||||| Sbjct: 772 cgatgtggtgttgagcatccaggtgtggaacggatggaagagcacctcggcagggcagct 713 Query: 310 caacttgggcagcttggggcagtcgatgaaggtcttgccgtccttgtcgacgcagaggta 369 | || ||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 712 gaggttaggcaggacagggcagtcgatgaagctcttggcgtccttgtcgacgcagaggta 653 Query: 370 gatctggtagagctgcttcttgccgaacggcccgtccttgcactgcacccccggcattac 429 ||||| ||| | ||||||||| || || ||||||||| |||||||||| || || | || Sbjct: 652 gatctcgtacaactgcttcttcccaaatggcccgtccctgcactgcactcctggtgtcac 593 Query: 430 tcccagcttctggttcaccgcccatttgatg 460 ||||||||||||||||| ||||| |||||| Sbjct: 592 acccagcttctggttcactgcccacttgatg 562
>emb|BX537351.16| Zebrafish DNA sequence from clone DKEYP-84B10 in linkage group 17, complete sequence Length = 161005 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 41 tattattttttacatatatatta 63 ||||||||||||||||||||||| Sbjct: 78868 tattattttttacatatatatta 78846 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 99 atattattttttacttctatattagcat 126 |||||||||||||| | ||||||||||| Sbjct: 78869 atattattttttacatatatattagcat 78842
>emb|AL953908.7| Zebrafish DNA sequence from clone CH211-202A12, complete sequence Length = 193129 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 40 gtattattttttacatatatatt 62 ||||||||||||||||||||||| Sbjct: 178695 gtattattttttacatatatatt 178717
>gb|AY517470.1| Triticum aestivum S-like RNase (WRN2) mRNA, complete cds Length = 850 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 355 gtcgacgcagaggtagatctggtagagctg 384 ||||||||||| ||||| |||||||||||| Sbjct: 628 gtcgacgcagaagtagagctggtagagctg 599
>gb|AE014816.1| Plasmodium falciparum 3D7 chromosome 14 section 1 of 13 of the complete sequence Length = 250029 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 41 tattattttttacatatatattattg 66 |||||||||||||| ||||||||||| Sbjct: 119715 tattattttttacacatatattattg 119690
>emb|AL929356.1|PFA929356 Plasmodium falciparum strain 3D7, chromosome 9; segment 2/5 Length = 335050 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 41 tattattttttacatatatattattg 66 ||||| |||||||||||||||||||| Sbjct: 244060 tattaatttttacatatatattattg 244085
>emb|AL360354.1|VYIVD10 Plasmodium vivax telomeric YAC clone, complete finished sequence Length = 155711 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 tattattttttacatatatatt 62 |||||||||||||||||||||| Sbjct: 35532 tattattttttacatatatatt 35511
>gb|AC026827.6| Homo sapiens chromosome 8, clone RP11-678C14, complete sequence Length = 186183 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 aaacccatattattttttactt 114 |||||||||||||||||||||| Sbjct: 66802 aaacccatattattttttactt 66823
>gb|AY107950.1| Zea mays PCO076023 mRNA sequence Length = 1046 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 355 gtcgacgcagaggtagatctggtagagctg 384 ||||||||||| ||||| |||||||||||| Sbjct: 802 gtcgacgcagaagtagagctggtagagctg 773
>gb|AC133175.4| Mus musculus BAC clone RP24-62B8 from chromosome 10, complete sequence Length = 180058 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 41 tattattttttacatatatatt 62 |||||||||||||||||||||| Sbjct: 122147 tattattttttacatatatatt 122168
>gb|AF000940.1|AF000940 Hordeum vulgare ribonuclease gene, complete cds Length = 1583 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 355 gtcgacgcagaggtagatctggtagagctg 384 ||||||||||| ||||| |||||||||||| Sbjct: 1481 gtcgacgcagaagtagagctggtagagctg 1452
>dbj|AP004286.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1425B2, complete sequence Length = 175274 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 aaacccatattattttttactt 114 |||||||||||||||||||||| Sbjct: 98490 aaacccatattattttttactt 98511
>gb|AC116877.18| Mus musculus chromosome 18, clone RP24-429E21, complete sequence Length = 188544 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 41 tattattttttacatatatattatt 65 |||||||||||| |||||||||||| Sbjct: 137251 tattattttttaaatatatattatt 137227
>gb|AC116799.9| Mus musculus chromosome 18, clone RP24-333N14, complete sequence Length = 164940 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 41 tattattttttacatatatattatt 65 |||||||||||| |||||||||||| Sbjct: 150904 tattattttttaaatatatattatt 150928
>gb|AC164589.6| Mus musculus chromosome 8, clone RP24-363C11, complete sequence Length = 197883 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 ccccaaacccatattattttt 109 ||||||||||||||||||||| Sbjct: 134756 ccccaaacccatattattttt 134736
>ref|XM_535606.2| PREDICTED: Canis familiaris similar to Ras-GTPase activating protein SH3 domain-binding protein 2 isoform a, transcript variant 1 (LOC478429), mRNA Length = 4345 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 gggatggaagaggacctcctc 300 ||||||||||||||||||||| Sbjct: 1579 gggatggaagaggacctcctc 1599
>ref|XM_843397.1| PREDICTED: Canis familiaris similar to Ras-GTPase activating protein SH3 domain-binding protein 2 isoform a, transcript variant 2 (LOC478429), mRNA Length = 4247 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 gggatggaagaggacctcctc 300 ||||||||||||||||||||| Sbjct: 1481 gggatggaagaggacctcctc 1501
>ref|XM_851100.1| PREDICTED: Canis familiaris similar to Ras-GTPase activating protein SH3 domain-binding protein 2 isoform a, transcript variant 9 (LOC478429), mRNA Length = 4324 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 gggatggaagaggacctcctc 300 ||||||||||||||||||||| Sbjct: 1558 gggatggaagaggacctcctc 1578
>ref|XM_851054.1| PREDICTED: Canis familiaris similar to Ras-GTPase activating protein SH3 domain-binding protein 2 isoform a, transcript variant 8 (LOC478429), mRNA Length = 4324 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 gggatggaagaggacctcctc 300 ||||||||||||||||||||| Sbjct: 1558 gggatggaagaggacctcctc 1578
>ref|XM_851019.1| PREDICTED: Canis familiaris similar to Ras-GTPase activating protein SH3 domain-binding protein 2 isoform a, transcript variant 7 (LOC478429), mRNA Length = 4318 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 gggatggaagaggacctcctc 300 ||||||||||||||||||||| Sbjct: 1552 gggatggaagaggacctcctc 1572
>ref|XM_850977.1| PREDICTED: Canis familiaris similar to Ras-GTPase activating protein SH3 domain-binding protein 2 isoform a, transcript variant 6 (LOC478429), mRNA Length = 3662 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 gggatggaagaggacctcctc 300 ||||||||||||||||||||| Sbjct: 896 gggatggaagaggacctcctc 916
>ref|XM_850902.1| PREDICTED: Canis familiaris similar to Ras-GTPase activating protein SH3 domain-binding protein 2 isoform a, transcript variant 4 (LOC478429), mRNA Length = 4246 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 gggatggaagaggacctcctc 300 ||||||||||||||||||||| Sbjct: 1480 gggatggaagaggacctcctc 1500
>ref|XM_850861.1| PREDICTED: Canis familiaris similar to Ras-GTPase activating protein SH3 domain-binding protein 2 isoform a, transcript variant 3 (LOC478429), mRNA Length = 3619 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 gggatggaagaggacctcctc 300 ||||||||||||||||||||| Sbjct: 853 gggatggaagaggacctcctc 873
>gb|AC124686.3| Mus musculus BAC clone RP24-422F20 from chromosome 10, complete sequence Length = 194018 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 ttattttttacttctatatta 122 ||||||||||||||||||||| Sbjct: 22497 ttattttttacttctatatta 22477
>gb|AC098878.3| Mus musculus BAC clone RP23-2G23 from 4, complete sequence Length = 209021 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 tattattttttacatatatat 61 ||||||||||||||||||||| Sbjct: 151973 tattattttttacatatatat 151953
>emb|X56851.1|PFPFMDR1 P.falciparum pfmdr1 gene Length = 8633 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 tattattttttacatatatat 61 ||||||||||||||||||||| Sbjct: 5769 tattattttttacatatatat 5749
>emb|AL593844.4| Human DNA sequence from clone RP11-406O16 on chromosome 6 Contains the 3' part of a novel gene, complete sequence Length = 157929 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 41 tattattttttacatatatattatt 65 |||||||||||||||||||| |||| Sbjct: 42801 tattattttttacatatatagtatt 42777
>gb|AE014838.1| Plasmodium falciparum 3D7 chromosome 11 section 3 of 8 of the complete sequence Length = 250029 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 gtattattttttacatatata 60 ||||||||||||||||||||| Sbjct: 66189 gtattattttttacatatata 66209
>emb|AL929353.1|PFA929353 Plasmodium falciparum strain 3D7, chromosome 5, segment 3/4 Length = 343050 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 tattattttttacatatatat 61 ||||||||||||||||||||| Sbjct: 303144 tattattttttacatatatat 303124
>emb|AL583924.1|MLEPRTN8 Mycobacterium leprae strain TN complete genome; segment 8/10 Length = 342300 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tgaaggtcttgccgtccttgt 356 ||||||||||||||||||||| Sbjct: 111079 tgaaggtcttgccgtccttgt 111059
>emb|AL008609.1|MLCB1788 Mycobacterium leprae cosmid B1788 Length = 39228 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tgaaggtcttgccgtccttgt 356 ||||||||||||||||||||| Sbjct: 15681 tgaaggtcttgccgtccttgt 15661
>emb|AL844848.12| Mouse DNA sequence from clone RP23-247N5 on chromosome 4 Contains part of the Ptprd gene for receptor type protein tyrosine phosphatase D and a CpG island, complete sequence Length = 199012 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 tattattttttacatatatat 61 ||||||||||||||||||||| Sbjct: 109330 tattattttttacatatatat 109310
>emb|BX548160.13| Zebrafish DNA sequence from clone DKEY-25G11 in linkage group 11, complete sequence Length = 237930 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 ttattttttacatatatatta 63 ||||||||||||||||||||| Sbjct: 115990 ttattttttacatatatatta 116010
>gb|AC016113.9| Homo sapiens, clone RP11-26P22, complete sequence Length = 185419 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 agaactgtttattcatatacttcac 39 |||| |||||||||||||||||||| Sbjct: 101208 agaagtgtttattcatatacttcac 101232
>gb|AC011748.7| Homo sapiens BAC clone RP11-441M4 from 2, complete sequence Length = 127037 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tttagacataatagaactgtt 23 ||||||||||||||||||||| Sbjct: 20678 tttagacataatagaactgtt 20658
>gb|AC151976.3| Mus musculus BAC clone RP24-446O20 from 10, complete sequence Length = 174449 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 ttattttttacttctatatta 122 ||||||||||||||||||||| Sbjct: 22220 ttattttttacttctatatta 22240
>emb|AL928997.8| Zebrafish DNA sequence from clone CH211-125O15 in linkage group 18, complete sequence Length = 169038 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 attattttttacttctatattagca 125 |||||||||||||| |||||||||| Sbjct: 92610 attattttttacttatatattagca 92634
>gb|AC099723.16| Mus musculus chromosome 8, clone RP23-369P21, complete sequence Length = 184770 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 ccccaaacccatattattttt 109 ||||||||||||||||||||| Sbjct: 119219 ccccaaacccatattattttt 119199
>ref|NM_100845.2| Arabidopsis thaliana cysteine-type peptidase AT1G09730 mRNA, complete cds Length = 3305 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 attttttacatatatattat 64 |||||||||||||||||||| Sbjct: 3202 attttttacatatatattat 3221
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 cgatgaaggtcttgccgtccttgt 356 ||||||||| |||||||||||||| Sbjct: 813684 cgatgaaggacttgccgtccttgt 813707
>gb|AC157556.12| Mus musculus chromosome 1, clone RP24-267A19, complete sequence Length = 198267 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ccaaacccatattatttttt 110 |||||||||||||||||||| Sbjct: 47467 ccaaacccatattatttttt 47448
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 tcttgccgtccttgtcgacg 361 |||||||||||||||||||| Sbjct: 3366785 tcttgccgtccttgtcgacg 3366766
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 ccagcttctggttcaccgcc 451 |||||||||||||||||||| Sbjct: 619856 ccagcttctggttcaccgcc 619875
>gb|AC142210.1| Solanum demissum chromosome 11 BAC PGEC589 genomic sequence, complete sequence Length = 91755 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 attattttttacatatatat 61 |||||||||||||||||||| Sbjct: 10787 attattttttacatatatat 10806
>gb|AF481231.1| Cucumis sativus PEPCK (Pepck) gene, complete cds Length = 8646 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 tattattttttacatatatattat 64 |||||||||||| ||||||||||| Sbjct: 5047 tattattttttatatatatattat 5024
>gb|AY217738.1| Eimeria tenella chloroplast, complete genome Length = 34750 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 attttttacatatatattat 64 |||||||||||||||||||| Sbjct: 20773 attttttacatatatattat 20754
>gb|AC132448.3| Mus musculus BAC clone RP23-180B23 from chromosome 8, complete sequence Length = 211388 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ttattttttacatatatatt 62 |||||||||||||||||||| Sbjct: 39172 ttattttttacatatatatt 39191
>gb|AC124198.2| Mus musculus BAC clone RP23-306E4 from 8, complete sequence Length = 172546 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ttattttttacatatatatt 62 |||||||||||||||||||| Sbjct: 169857 ttattttttacatatatatt 169876
>gb|AC126782.23| Medicago truncatula clone mth2-14p11, complete sequence Length = 135659 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 tattattttttacatatatattat 64 |||||||||||||| ||||||||| Sbjct: 9729 tattattttttacacatatattat 9752
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 ccagcttctggttcaccgcc 451 |||||||||||||||||||| Sbjct: 276582 ccagcttctggttcaccgcc 276601
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 ccagcttctggttcaccgcc 451 |||||||||||||||||||| Sbjct: 276639 ccagcttctggttcaccgcc 276658
>emb|BX548053.7| Zebrafish DNA sequence from clone DKEY-189G17 in linkage group 9, complete sequence Length = 210830 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ttcacgtattattttttaca 54 |||||||||||||||||||| Sbjct: 196888 ttcacgtattattttttaca 196907
>emb|BX927203.12| Zebrafish DNA sequence from clone CH211-225B11 in linkage group 5, complete sequence Length = 135925 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 attttttacatatatattat 64 |||||||||||||||||||| Sbjct: 35309 attttttacatatatattat 35290
>gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194006 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tacatatatattattggggg 70 |||||||||||||||||||| Sbjct: 150177 tacatatatattattggggg 150158
>gb|AC117379.3| Homo sapiens 3 BAC RP11-392C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181191 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 tttttacttctatattagcatata 129 |||||||||||||||| ||||||| Sbjct: 143166 tttttacttctatatttgcatata 143143
>gb|AC090751.9| Homo sapiens chromosome 15, clone RP11-331H13, complete sequence Length = 207888 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ttattttttacatatatatt 62 |||||||||||||||||||| Sbjct: 129839 ttattttttacatatatatt 129820
>dbj|AK155395.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630224A13 product:unclassifiable, full insert sequence Length = 3919 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gtattattttttacatatat 59 |||||||||||||||||||| Sbjct: 1197 gtattattttttacatatat 1178
>gb|AC087844.6| Homo sapiens chromosome 15, clone CTD-2534H21, complete sequence Length = 177730 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ttattttttacatatatatt 62 |||||||||||||||||||| Sbjct: 29669 ttattttttacatatatatt 29650
>emb|BX547939.11| Zebrafish DNA sequence from clone CH211-201M19 in linkage group 19, complete sequence Length = 215708 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ttttacatatatattattgg 67 |||||||||||||||||||| Sbjct: 98392 ttttacatatatattattgg 98373
>gb|AC159193.2| Mus musculus BAC clone RP24-68E20 from chromosome 12, complete sequence Length = 243976 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ttattttttacatatatatt 62 |||||||||||||||||||| Sbjct: 242034 ttattttttacatatatatt 242053
>gb|AC148989.4| Mus musculus BAC clone RP24-445D7 from chromosome 7, complete sequence Length = 194576 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 attagcatataggaaagaca 138 |||||||||||||||||||| Sbjct: 39520 attagcatataggaaagaca 39501
>gb|AC013290.4|AC013290 Homo sapiens, clone RP11-115P21, complete sequence Length = 139635 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 attttttacatatatattat 64 |||||||||||||||||||| Sbjct: 36238 attttttacatatatattat 36219
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 ttcacgtattattttttacatata 58 |||||||||||||||||| ||||| Sbjct: 7191500 ttcacgtattattttttatatata 7191477
>gb|BC094488.1| Xenopus laevis cDNA clone IMAGE:6945881, partial cds Length = 3439 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ttttttacatatatattatt 65 |||||||||||||||||||| Sbjct: 2185 ttttttacatatatattatt 2204
>gb|AC153515.8| Mus musculus 10 BAC RP23-425D13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209920 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 aagggatggaagaggacctcctcg 301 |||||| ||||||||||||||||| Sbjct: 94376 aagggacggaagaggacctcctcg 94353
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 aggtcttgccgtccttgtcg 358 |||||||||||||||||||| Sbjct: 2954542 aggtcttgccgtccttgtcg 2954523 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 aggtcttgccgtccttgtcg 358 |||||||||||||||||||| Sbjct: 173335 aggtcttgccgtccttgtcg 173316
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 ttcacgtattattttttacatata 58 |||||||||||||||||| ||||| Sbjct: 31984 ttcacgtattattttttatatata 31961
>dbj|AB090308.2| Bombyx mori Bmtitin1, Bmtitin2, Bmmiple, Bmsyx6, BmPM-Scl, Bmtkz, BmubcD4 genes, partial and complete cds Length = 159777 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ttttttacatatatattatt 65 |||||||||||||||||||| Sbjct: 104210 ttttttacatatatattatt 104229
>emb|AJ239127.1|GMA239127 Glycine max msg gene, exons 1-2 Length = 3994 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ttattttttacatatatatt 62 |||||||||||||||||||| Sbjct: 2171 ttattttttacatatatatt 2190
>emb|AL772314.9| Zebrafish DNA sequence from clone DKEY-89B17 in linkage group 19, complete sequence Length = 185640 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 acgtattattttttacatatatat 61 ||||||||||||||||||| |||| Sbjct: 121781 acgtattattttttacataaatat 121758
>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete sequence Length = 315108 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tacatatatattattggggg 70 |||||||||||||||||||| Sbjct: 81718 tacatatatattattggggg 81737
>gb|AC004713.1|AC004713 Drosophila melanogaster, chromosome 3L, region 62B8-62B11, P1 clone DS04710, complete sequence Length = 72327 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tacatatatattattggggg 70 |||||||||||||||||||| Sbjct: 53242 tacatatatattattggggg 53261
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 335 atgaaggtcttgccgtccttgtcg 358 |||||||||||||| ||||||||| Sbjct: 2018415 atgaaggtcttgccctccttgtcg 2018392
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 ccagcttctggttcaccgcc 451 |||||||||||||||||||| Sbjct: 4484875 ccagcttctggttcaccgcc 4484894 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tgaaggtcttgccgtccttg 355 |||||||||||||||||||| Sbjct: 1701862 tgaaggtcttgccgtccttg 1701881
>gb|AC002981.1|AC002981 Homo sapiens Xp22 BAC GS279A12 (Genome Systems) complete sequence Length = 153568 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 ttattttttacttctatatt 121 |||||||||||||||||||| Sbjct: 143068 ttattttttacttctatatt 143087
>gb|AC124516.4| Mus musculus BAC clone RP23-387C9 from 12, complete sequence Length = 236774 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ttattttttacatatatatt 62 |||||||||||||||||||| Sbjct: 17589 ttattttttacatatatatt 17608
>gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1, complete sequence Length = 146505 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 attttttacatatatattat 64 |||||||||||||||||||| Sbjct: 34656 attttttacatatatattat 34637
>gb|AD000004.1|MSGY224 Mycobacterium tuberculosis sequence from clone y224 Length = 40051 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 ccagcttctggttcaccgcc 451 |||||||||||||||||||| Sbjct: 4474 ccagcttctggttcaccgcc 4493
>emb|AL513356.8| Mouse DNA sequence from clone RP23-193O17 on chromosome X, complete sequence Length = 216238 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gtattattttttacatatat 59 |||||||||||||||||||| Sbjct: 70048 gtattattttttacatatat 70029 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,214,247 Number of Sequences: 3902068 Number of extensions: 5214247 Number of successful extensions: 110912 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 110341 Number of HSP's gapped (non-prelim): 571 length of query: 474 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 452 effective length of database: 17,147,199,772 effective search space: 7750534296944 effective search space used: 7750534296944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)