ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet119e07 |
|---|---|
| Clone Library Name | barley_pub |
>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic| 7S globulin high-kDa subunit; Basic 7S globulin low-kDa subunit] Length = 427 Score = 34.7 bits (78), Expect = 0.098 Identities = 14/29 (48%), Positives = 22/29 (75%) Frame = -1 Query: 279 VVIGGHTMEDNLLEFDLQRARLGFSSSLL 193 + +G +E+NL+ FDL R+R+GFS+S L Sbjct: 383 ITLGARQLEENLVVFDLARSRVGFSTSSL 411 Score = 34.7 bits (78), Expect = 0.098 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Frame = -3 Query: 424 AIKVNGRAV-PLNASLLAIDKQGGGGTKLSTVAPYTVLETSIHKAVTDV 281 +I++N +V PLN I GGT +ST P+ VL+ S+++A T V Sbjct: 260 SIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQV 308
>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:| Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin 2 low-kDa subunit] Length = 433 Score = 32.3 bits (72), Expect = 0.49 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = -1 Query: 279 VVIGGHTMEDNLLEFDLQRARLGFSSSLL 193 V +G +E+ L+ FDL R+R+GFS+S L Sbjct: 389 VTLGTRQLEEKLMVFDLARSRVGFSTSSL 417
>SASH1_HUMAN (O94885) SAM and SH3 domain-containing protein 1 (Proline-glutamate| repeat-containing protein) Length = 1247 Score = 32.3 bits (72), Expect = 0.49 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 8/39 (20%) Frame = +3 Query: 213 RASPAADRTPAGCPPSCAPR--------SPPTSVTALWM 305 R SPA+ +P+ CPP+ APR SPP++ W+ Sbjct: 1023 RGSPASPTSPSDCPPALAPRPLSGQAPGSPPSTRPPPWL 1061
>SOX4_HUMAN (Q06945) Transcription factor SOX-4| Length = 474 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +3 Query: 138 PFHLLSTQGGSCCRSSAGTAGRS*TRASPAADRTPA 245 P L +G C + +GRS +SPAA R+PA Sbjct: 321 PLGLYEEEGAGCSPDAPSLSGRSSAASSPAAGRSPA 356
>EPAS1_RAT (Q9JHS1) Endothelial PAS domain-containing protein 1 (EPAS-1)| (Hypoxia-inducible factor 2 alpha) (HIF-2 alpha) (HIF2 alpha) Length = 874 Score = 30.0 bits (66), Expect = 2.4 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Frame = -2 Query: 239 SSICSGRGS-GSAPPCCSGRRPATTSALGRQQMEWHPD 129 S+I GS GS PPCC +S GR W PD Sbjct: 604 STIFFDAGSKGSLPPCCGQASTPLSSMGGRSNTPWPPD 641
>EPAS1_HUMAN (Q99814) Endothelial PAS domain-containing protein 1 (EPAS-1)| (Member of PAS protein 2) (MOP2) (Hypoxia-inducible factor 2 alpha) (HIF-2 alpha) (HIF2 alpha) (HIF-1 alpha-like factor) (HLF) Length = 870 Score = 30.0 bits (66), Expect = 2.4 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Frame = -2 Query: 239 SSICSGRGS-GSAPPCCSGRRPATTSALGRQQMEWHPD 129 SSI GS S PPCC +S GR +W PD Sbjct: 605 SSIFFDAGSKASLPPCCGQASTPLSSMGGRSNTQWPPD 642
>YJIV_ECOLI (P39393) Hypothetical protein yjiV| Length = 906 Score = 30.0 bits (66), Expect = 2.4 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Frame = +2 Query: 194 SREELNPSLARCR---SNSSRLSSIVCPPITTDVRDRLVDGGLQHGVGRHRAE 343 S+E+ LA+ R S+ ++ + + TD+ DR+V+GG + H A+ Sbjct: 560 SQEDYAEGLAKARDWVSHDPLIAQLRSENVWTDINDRVVEGGFYYRTAEHSAQ 612
>HXD3_MOUSE (P09027) Homeobox protein Hox-D3 (Hox-4.1) (MH-19)| Length = 417 Score = 29.6 bits (65), Expect = 3.2 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 3/76 (3%) Frame = +3 Query: 75 NFDCNLNNASTHIIFCNPIRMPFHLLSTQGGSCCRSSAGTAGRS*TRASPA---ADRTPA 245 + D + +++ I P+R P H + GSC R G + P +++ P Sbjct: 42 SLDSDYPSSACSIQSSAPLRAPAHKGAELNGSCMRPGTGNSQGGGGGNQPPGLNSEQQPP 101 Query: 246 GCPPSCAPRSPPTSVT 293 PP P PP+S T Sbjct: 102 QPPPPPPPTLPPSSPT 117
>ADCY5_CANFA (P30803) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase| type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5) (Ca(2+)-inhibitable adenylyl cyclase) Length = 1265 Score = 29.6 bits (65), Expect = 3.2 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Frame = -3 Query: 280 GGDRGAHDGGQPAGVRSAAGEARVQLLPA--VPADDLQQL 167 GGDRGA DG PAG A A +Q+ + P+D L++L Sbjct: 194 GGDRGARDGDGPAG-PGACCRALLQIFRSKKFPSDKLERL 232
>PHF1_HUMAN (O43189) PHD finger protein 1 (PHF1 protein)| Length = 567 Score = 29.3 bits (64), Expect = 4.1 Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 5/117 (4%) Frame = +3 Query: 42 PKQNPGGNTQTNFDCNLNNASTHIIFCNPIRM--PFHLLSTQGGSCCRSSAGTAGRS*TR 215 P +P + Q + N + +PIRM FH SA TAG S Sbjct: 419 PSPSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFH-----------PSASTAGTSGDS 467 Query: 216 ASPAADRTPAGCP---PSCAPRSPPTSVTALWMEVSSTV*GATVLSLVXXXXCLSMA 377 P DR+P P+ P+S P S+TA VSS G S C S++ Sbjct: 468 GPP--DRSPLELHIGFPTDIPKSAPHSMTASSSSVSSPSPGLPRRSAPPSPLCRSLS 522
>DBPA_XENLA (Q5PQD5) DNA-binding protein A (Cold shock domain-containing| protein A) Length = 361 Score = 29.3 bits (64), Expect = 4.1 Identities = 16/36 (44%), Positives = 17/36 (47%) Frame = +3 Query: 180 SSAGTAGRS*TRASPAADRTPAGCPPSCAPRSPPTS 287 S AG A T AA PA PP AP+SP S Sbjct: 2 SEAGEATTGGTTLPQAAADAPAAAPPDPAPKSPAAS 37
>DBPA_RAT (Q62764) DNA-binding protein A (Cold shock domain-containing| protein A) (Muscle Y-box protein YB2) (Y-box-binding protein-A) (RYB-A) Length = 361 Score = 29.3 bits (64), Expect = 4.1 Identities = 16/36 (44%), Positives = 17/36 (47%) Frame = +3 Query: 180 SSAGTAGRS*TRASPAADRTPAGCPPSCAPRSPPTS 287 S AG A T AA PA PP AP+SP S Sbjct: 2 SEAGEATTGGTTLPQAAADAPAAAPPDPAPKSPAAS 37
>DBPA_MOUSE (Q9JKB3) DNA-binding protein A (Cold shock domain-containing| protein A) (Y-box protein 3) Length = 361 Score = 29.3 bits (64), Expect = 4.1 Identities = 16/36 (44%), Positives = 17/36 (47%) Frame = +3 Query: 180 SSAGTAGRS*TRASPAADRTPAGCPPSCAPRSPPTS 287 S AG A T AA PA PP AP+SP S Sbjct: 2 SEAGEATTGGTTLPQAAADAPAAAPPDPAPKSPAAS 37
>RL18_ENTFA (Q839E8) 50S ribosomal protein L18| Length = 118 Score = 29.3 bits (64), Expect = 4.1 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = -3 Query: 388 ASLLAIDKQGGGGTKLSTVAPY--TVLETSIHKAVTDVGGDRGAH 260 AS A+DK+ GGTK T A V E + K + V DRG + Sbjct: 54 ASASALDKEISGGTKTETAAAVGKLVAERAAEKGIKKVVFDRGGY 98
>EPAS1_MOUSE (P97481) Endothelial PAS domain-containing protein 1 (EPAS-1)| (Hypoxia-inducible factor 2 alpha) (HIF-2 alpha) (HIF2 alpha) (HIF-1 alpha-like factor) (MHLF) (HIF-related factor) (HRF) Length = 874 Score = 29.3 bits (64), Expect = 4.1 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Frame = -2 Query: 239 SSICSGRGS-GSAPPCCSGRRPATTSALGRQQMEWHPD 129 SSI GS GS PCC +S GR +W PD Sbjct: 604 SSIFFDAGSKGSLSPCCGQASTPLSSMGGRSNTQWPPD 641
>SOX4_MOUSE (Q06831) Transcription factor SOX-4| Length = 440 Score = 29.3 bits (64), Expect = 4.1 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 7/73 (9%) Frame = +3 Query: 138 PFHLLSTQGGSCCRSSAGTAGRS*TRASPAADRTPAG-------CPPSCAPRSPPTSVTA 296 P L G C +GRS +SPAA R+PA S AP S P+ ++ Sbjct: 289 PLGLYEDGGPGCSPDGRSLSGRSSAASSPAASRSPADHRGYASLRAASPAPSSAPSHASS 348 Query: 297 LWMEVSSTV*GAT 335 SS+ G++ Sbjct: 349 SLSSSSSSSSGSS 361
>CAD17_RAT (P55281) Cadherin-17 precursor (Liver-intestine-cadherin)| (LI-cadherin) Length = 827 Score = 29.3 bits (64), Expect = 4.1 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 2/86 (2%) Frame = -3 Query: 427 TAIKVNGR--AVPLNASLLAIDKQGGGGTKLSTVAPYTVLETSIHKAVTDVGGDRGAHDG 254 TA NG+ A PL + ID T LS V TV E ++ + G AHD Sbjct: 310 TAKDENGKPLAYPLEIRVKVIDINDNPPTCLSQV---TVFEVQENEVLGSSIGIFAAHDM 366 Query: 253 GQPAGVRSAAGEARVQLLPAVPADDL 176 + + S V P VP+D+L Sbjct: 367 DEANNINSILKYRLVDQTPKVPSDEL 392
>COL13_CAEEL (P20631) Cuticle collagen 13 precursor| Length = 316 Score = 28.9 bits (63), Expect = 5.4 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = +3 Query: 156 TQGGSCCRSSAGTAGRS*TRASPAADRTPAGCPPSCAPRSP 278 + GGSCC +G AG + SP D P AP +P Sbjct: 117 SSGGSCCSCGSGAAGPA---GSPGQDGAPGNDGAPGAPGNP 154
>COL12_CAEEL (P20630) Cuticle collagen 12 precursor| Length = 316 Score = 28.9 bits (63), Expect = 5.4 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = +3 Query: 156 TQGGSCCRSSAGTAGRS*TRASPAADRTPAGCPPSCAPRSP 278 + GGSCC +G AG + SP D P AP +P Sbjct: 117 SSGGSCCSCGSGAAGPA---GSPGQDGAPGNDGAPGAPGNP 154
>KEFG_YERPE (Q8ZJC5) Glutathione-regulated potassium-efflux system ancillary| protein kefG Length = 183 Score = 28.9 bits (63), Expect = 5.4 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +2 Query: 263 CPPITTDVRDRLVDGGLQHGVGRHRAELGAAAALLVDGQQRGVQRHG 403 CP + + DR++ G +GVG H +++ G+Q G R G Sbjct: 76 CPALLKEWLDRVLARGFANGVGGHALTGKHWRSVITTGEQEGTYRIG 122
>KEFG_YERPS (Q664Q4) Glutathione-regulated potassium-efflux system ancillary| protein kefG Length = 182 Score = 28.9 bits (63), Expect = 5.4 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +2 Query: 263 CPPITTDVRDRLVDGGLQHGVGRHRAELGAAAALLVDGQQRGVQRHG 403 CP + + DR++ G +GVG H +++ G+Q G R G Sbjct: 75 CPALLKEWLDRVLARGFANGVGGHALTGKHWRSVITTGEQEGTYRIG 121
>D103A_PANTR (Q95JD2) Beta-defensin 103A precursor (Defensin, beta 103A)| (Defensin, beta 103) (Beta-defensin 3) (DEFB-3) (BD-3) (cBD-3) Length = 67 Score = 28.9 bits (63), Expect = 5.4 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Frame = +3 Query: 30 LFKQPKQNPGG--NTQTNFDCNLNNASTHIIFCNPIRMPFHLLSTQGGSCCR 179 LF P GG NT + C + ++ C P ST+G CCR Sbjct: 13 LFLVPVPGHGGIINTLQKYYCRVRGGRCAVLTCLPKEEQIGKCSTRGRKCCR 64
>D103A_HUMAN (P81534) Beta-defensin 103A precursor (Beta-defensin 3) (DEFB-3)| (BD-3) (hBD-3) (HBD3) (Defensin-like protein) Length = 67 Score = 28.9 bits (63), Expect = 5.4 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Frame = +3 Query: 30 LFKQPKQNPGG--NTQTNFDCNLNNASTHIIFCNPIRMPFHLLSTQGGSCCR 179 LF P GG NT + C + ++ C P ST+G CCR Sbjct: 13 LFLVPVPGHGGIINTLQKYYCRVRGGRCAVLSCLPKEEQIGKCSTRGRKCCR 64
>PGCA_BOVIN (P13608) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2364 Score = 28.5 bits (62), Expect = 7.1 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = +1 Query: 109 ISSSAIPSGCHSICCLPKAEVVAGRLPEQQGGAEPEP 219 + S++P P+AEV A PE GGA P Sbjct: 1924 VEVSSVPESSGETSAYPEAEVGASAAPEASGGASGSP 1960
>DPOLA_LEIDO (O00874) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)| Length = 1339 Score = 28.5 bits (62), Expect = 7.1 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +1 Query: 130 SGCHSICCLPKAEVVAGRLPEQQGGAEPEPRPLQIELQQ 246 SG +I LP A+ A +L + GA+P P+P Q L Q Sbjct: 48 SGDLTIPQLPSAKKAAKKLRKPPSGAKPTPKPKQQTLAQ 86
>HIPK2_HUMAN (Q9H2X6) Homeodomain-interacting protein kinase 2 (EC 2.7.11.1)| (hHIPk2) Length = 1198 Score = 28.5 bits (62), Expect = 7.1 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = +3 Query: 144 HLLSTQGGSCCRSSAGTAGRS*TRASPAADRTPAGCPPSCAPRSPPTSVTALWMEVSST 320 H S + S C S+ A S R+ + TP C + + TSVT W +V+S+ Sbjct: 807 HQSSVRNVSTCEVSSSQAISSPQRSKRVKENTPPRCAMVHSSPACSTSVTCGWGDVASS 865
>CXGS_CONGE (P15472) Conotoxin GS (CGS)| Length = 34 Score = 28.5 bits (62), Expect = 7.1 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = -2 Query: 230 CSGRGSGSAPPCCSGRR 180 CSGRGS P CC G R Sbjct: 2 CSGRGSRCPPQCCMGLR 18
>KIC1_YEAST (P38692) Serine/threonine-protein kinase KIC1 (EC 2.7.11.1) (Kinase| that interacts with CDC31) (N-rich kinase 1) Length = 1080 Score = 28.1 bits (61), Expect = 9.2 Identities = 21/68 (30%), Positives = 28/68 (41%) Frame = +1 Query: 37 NSQNKTQGETHKQILTAI*TTQAHISSSAIPSGCHSICCLPKAEVVAGRLPEQQGGAEPE 216 N+ K T +A +T A IS IPSG L A A + G P Sbjct: 956 NTTIKANSTTIATSSSAAASTTAPISQQTIPSGTQFNHILSSAATAANSVNSLGFGMCPP 1015 Query: 217 PRPLQIEL 240 P+ LQ+E+ Sbjct: 1016 PQSLQMEM 1023
>DEND_HUMAN (O94850) Dendrin| Length = 657 Score = 28.1 bits (61), Expect = 9.2 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = +3 Query: 165 GSCCRSSAGTAGRS*TRASPAADRTPAGCPPSCAPRS 275 GS A G + T +PA T A C P APRS Sbjct: 274 GSDSHPQAKATGSAGTEIAPAGSATAAPCAPHPAPRS 310
>FUR11_DROME (P26016) Furin-like protease 1, isoforms 1/1-X/2 precursor (EC| 3.4.21.75) (Furin-1) (Kex2-like endoprotease 1) (dKLIP-1) Length = 1269 Score = 28.1 bits (61), Expect = 9.2 Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 8/105 (7%) Frame = +3 Query: 9 NRSISC*LFK-----QPKQNPGGNTQTNFDCNLNN--ASTHIIFCNPIRMPFHL-LSTQG 164 N + C LFK Q KQ G + + N + A T +F ++ + L Sbjct: 77 NFNFDCNLFKTSFLTQHKQKRSGKSSSKSKSNRSRPLAKTKAVFLLALQFSAVVFLCNIN 136 Query: 165 GSCCRSSAGTAGRS*TRASPAADRTPAGCPPSCAPRSPPTSVTAL 299 S TA S +SPAA + PP+ A PP +AL Sbjct: 137 VGFVAGSVATAASSAGGSSPAAPSSAPSSPPTVAVPPPPPPSSAL 181
>CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = -3 Query: 298 KAVTDVGGDRGAHDGGQPAGVRSAAGEARVQLLPAVPADDLQQLPP 161 + +T + GD+G G R GE Q LP P D Q+ PP Sbjct: 471 RGITGIVGDKGEK------GARGLDGEPGPQGLPGAPGDQGQRGPP 510
>TROAP_HUMAN (Q12815) Trophinin-associated protein (Tastin) (Trophinin-assisting| protein) Length = 778 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = -2 Query: 209 SAPPCCSGRRPATTSALGRQQMEWHP 132 S PPCCS PATTS + Q HP Sbjct: 657 SLPPCCSQWAPATTSLIFSSQ---HP 679
>OPSG_CAVPO (Q9R024) Green-sensitive opsin (Green cone photoreceptor pigment)| Length = 364 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = -2 Query: 164 ALGRQQMEWHPDGIAEDDMCACVVQIAVKICLCVSPWVLFWLF 36 A+ +QQ E AE ++ VV + + CLC P+ F F Sbjct: 248 AVAKQQKESESTQKAEKEVTRMVVVMVLAYCLCWGPYAFFACF 290
>OPSR_CANFA (O18914) Red-sensitive opsin (Red cone photoreceptor pigment)| (Fragment) Length = 273 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = -2 Query: 164 ALGRQQMEWHPDGIAEDDMCACVVQIAVKICLCVSPWVLFWLF 36 A+ +QQ E AE ++ VV + + CLC P+ F F Sbjct: 201 AVAKQQKESESTQKAEKEVTRMVVVMVLAYCLCWGPYTFFACF 243
>AXUD1_HUMAN (Q96S65) Axin-1 up-regulated gene 1 protein (TGF-beta-induced| apoptosis protein 3) (TAIP-3) (URAX1 protein) Length = 589 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +1 Query: 109 ISSSAIPSGCHSICCLPKAEVVAGRLPEQQGGAEPEPRP 225 +SSS+ SGC S C P + V E++G + P P Sbjct: 19 VSSSSSSSGCQSRSCSPSSSVSRAWDSEEEGPWDQMPLP 57
>FUR1C_DROME (P30430) Furin-like protease 1, isoform 1-CRR precursor (EC| 3.4.21.75) (Furin-1) (Kex2-like endoprotease 1) (dKLIP-1) Length = 1101 Score = 28.1 bits (61), Expect = 9.2 Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 8/105 (7%) Frame = +3 Query: 9 NRSISC*LFK-----QPKQNPGGNTQTNFDCNLNN--ASTHIIFCNPIRMPFHL-LSTQG 164 N + C LFK Q KQ G + + N + A T +F ++ + L Sbjct: 77 NFNFDCNLFKTSFLTQHKQKRSGKSSSKSKSNRSRPLAKTKAVFLLALQFSAVVFLCNIN 136 Query: 165 GSCCRSSAGTAGRS*TRASPAADRTPAGCPPSCAPRSPPTSVTAL 299 S TA S +SPAA + PP+ A PP +AL Sbjct: 137 VGFVAGSVATAASSAGGSSPAAPSSAPSSPPTVAVPPPPPPSSAL 181
>CAD17_MOUSE (Q9R100) Cadherin-17 precursor (Liver-intestine-cadherin)| (LI-cadherin) (BILL-cadherin) (P130) Length = 827 Score = 28.1 bits (61), Expect = 9.2 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 2/86 (2%) Frame = -3 Query: 427 TAIKVNGR--AVPLNASLLAIDKQGGGGTKLSTVAPYTVLETSIHKAVTDVGGDRGAHDG 254 TA NG+ A PL + ID T LS P TV E ++ + + G AHD Sbjct: 310 TAKDENGKPLAYPLEIYVKVIDINDNPPTCLS---PVTVFEVQENEPLGNSIGIFEAHDM 366 Query: 253 GQPAGVRSAAGEARVQLLPAVPADDL 176 + + S V P VP+D L Sbjct: 367 DEANNINSILKYKLVDQTPKVPSDGL 392 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,960,253 Number of Sequences: 219361 Number of extensions: 1346304 Number of successful extensions: 5960 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 5391 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5949 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
