ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet119e07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 167 4e-38
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 167 4e-38
3dbj|AK070554.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 4e-38
4dbj|AK122177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
5dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
6dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
7dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
8ref|NM_190069.1| Oryza sativa (japonica cultivar-group), predic... 50 0.006
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
10dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
11dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
12gb|AC012049.8| Homo sapiens chromosome 10 clone RP11-76F22, comp... 44 0.37
13gb|AC022537.8| Homo sapiens chromosome 10 clone RP11-40C11, comp... 44 0.37
14dbj|AB007850.1| Athalia rosae mRNA for vitellogenin, complete cds 44 0.37
15ref|NM_001031296.1| Gallus gallus splicing factor, arginine/seri... 42 1.5
16gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
17gb|AE009101.1| Agrobacterium tumefaciens str. C58 circular chrom... 42 1.5
18emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.5
19emb|BX640428.1| Bordetella parapertussis strain 12822, complete ... 42 1.5
20emb|BX640414.1| Bordetella pertussis strain Tohama I, complete g... 42 1.5
21emb|AJ720592.1| Gallus gallus mRNA for hypothetical protein, clo... 42 1.5
22gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 42 1.5
23emb|CR389009.1| Gallus gallus finished cDNA, clone ChEST177c22 42 1.5
24dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.5
25emb|X05768.1|RVCYC Rhodopseudomonas viridis gene for the cytochr... 42 1.5
26ref|XM_464952.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
27ref|XM_468621.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
28gb|AY023295.1| Oryza sativa microsatellite MRG5620 containing (G... 40 5.8
29gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 5.8
30gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 5.8
31gb|AC146701.9| Mus musculus chromosome 10, clone RP24-142C15, co... 40 5.8
32gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.8
33gb|AC132461.3| Mus musculus chromosome 5 clone RP23-33C9, comple... 40 5.8
34emb|CT009746.6| Zebrafish DNA sequence from clone CH73-236M19 in... 40 5.8
35gb|AC111096.15| Mus musculus chromosome 3, clone RP23-174B18, co... 40 5.8
36gb|AC113433.8| Oryza sativa chromosome 3 BAC OSJNBb0108E08 genom... 40 5.8
37gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 5.8
38gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 5.8
39emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O... 40 5.8
40emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.8
41gb|BC075800.1| Homo sapiens protein kinase, cAMP-dependent, regu... 40 5.8
42emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 40 5.8
43dbj|AK128639.1| Homo sapiens cDNA FLJ46798 fis, clone TRACH30316... 40 5.8
44gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 5.8
45dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
46dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
47dbj|D90334.2| Homo sapiens HGF gene for hepatocyte growth factor... 40 5.8
48gb|AY246560.1| Homo sapiens hepatocyte growth factor (hepapoieti... 40 5.8
49dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 5.8
50dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.8
51dbj|AP005694.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
52dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
53ref|XM_317601.2| Anopheles gambiae str. PEST ENSANGP00000010004 ... 40 5.8
54gb|AC004960.1|AC004960 Homo sapiens PAC clone RP5-1098B1 from 7q... 40 5.8
55emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.8
56gb|AC112685.16| Mus musculus chromosome 3, clone RP23-340E10, co... 40 5.8
57gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 5.8
58gb|AC170751.2| Mus musculus BAC clone CH25-484K21 from chromosom... 40 5.8
59emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on ch... 40 5.8
60emb|AL626784.11| Mouse DNA sequence from clone RP23-392J14 on ch... 40 5.8 
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score =  167 bits (84), Expect = 4e-38
 Identities = 126/140 (90%)
 Strand = Plus / Minus

                                                                         
Query: 283   cgtccgtgaccgccttgtggatggaggtctccagcacggtgtagggcgccaccgtgctga 342
             |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| |
Sbjct: 89417 cgtcggtgaccgccttgtggatggaggtctccagcacggtgtagggggtcaccgtgctca 89358

                                                                         
Query: 343   gcttggtgccgccgccgccctgcttgtcgatggccagcagcgaggcgttcagcggcacgg 402
             |||||||||| ||  | |||| ||||| |||||| |||||||  | ||||||||||||||
Sbjct: 89357 gcttggtgccacccactcccttcttgttgatggcaagcagcgtcgtgttcagcggcacgg 89298

                                 
Query: 403   cgcggccgttcaccttgatg 422
             ||||||||||||||||||||
Sbjct: 89297 cgcggccgttcaccttgatg 89278



 Score =  141 bits (71), Expect = 2e-30
 Identities = 128/147 (87%)
 Strand = Plus / Minus

                                                                         
Query: 283   cgtccgtgaccgccttgtggatggaggtctccagcacggtgtagggcgccaccgtgctga 342
             |||| ||||||||||||| |||||||||||||||||||||||| || | || | |||| |
Sbjct: 96296 cgtcggtgaccgccttgtagatggaggtctccagcacggtgtaaggggacaacatgctca 96237

                                                                         
Query: 343   gcttggtgccgccgccgccctgcttgtcgatggccagcagcgaggcgttcagcggcacgg 402
             |||||||||||||  | ||   |||| |||||||||||||||  |||||||| |||||||
Sbjct: 96236 gcttggtgccgcccactccgctcttggcgatggccagcagcgtcgcgttcaggggcacgg 96177

                                        
Query: 403   cgcggccgttcaccttgatggccgtca 429
             |||||||||||||||||||| ||||||
Sbjct: 96176 cgcggccgttcaccttgatgcccgtca 96150



 Score =  129 bits (65), Expect = 8e-27
 Identities = 122/141 (86%)
 Strand = Plus / Minus

                                                                         
Query: 289   tgaccgccttgtggatggaggtctccagcacggtgtagggcgccaccgtgctgagcttgg 348
             |||||||||||| |||||||||||||||||||||||| || | | ||||||| ||| |||
Sbjct: 91907 tgaccgccttgtagatggaggtctccagcacggtgtaaggagacgccgtgctcagcgtgg 91848

                                                                         
Query: 349   tgccgccgccgccctgcttgtcgatggccagcagcgaggcgttcagcggcacggcgcggc 408
             |||||||  |||| | ||||||||| ||||  ||||  |||||||| |||||| ||||||
Sbjct: 91847 tgccgcctacgccattcttgtcgattgccaagagcgtcgcgttcagtggcacgtcgcggc 91788

                                  
Query: 409   cgttcaccttgatggccgtca 429
             |||||||||||||| ||||||
Sbjct: 91787 cgttcaccttgatgcccgtca 91767



 Score =  129 bits (65), Expect = 8e-27
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                         
Query: 161   aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 220
             ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |
Sbjct: 89775 aggcgaaagttgttgcaggtcgtttgccggaacaggagggaggagctgaaccccagccgc 89716

                                                                         
Query: 221   gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 280
             |  | |  ||| || |||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 89715 gatcccaccaggtcaaactccagcaggttgtcctccatcatgtgaccgccgatcaccacc 89656

                  
Query: 281   gacgt 285
             |||||
Sbjct: 89655 gacgt 89651



 Score =  125 bits (63), Expect = 1e-25
 Identities = 120/139 (86%)
 Strand = Plus / Minus

                                                                          
Query: 291    accgccttgtggatggaggtctccagcacggtgtagggcgccaccgtgctgagcttggtg 350
              ||||||| |||||||||  ||||||||||||||||||| | ||||||||| |||||||||
Sbjct: 103349 accgcctggtggatggatctctccagcacggtgtagggggacaccgtgcttagcttggtg 103290

                                                                          
Query: 351    ccgccgccgccctgcttgtcgatggccagcagcgaggcgttcagcggcacggcgcggccg 410
              |||||  | || | ||||||||||||||||||||  ||||| | |||||||| | |||||
Sbjct: 103289 ccgcccactcctttcttgtcgatggccagcagcgtcgcgtttaccggcacggtgtggccg 103230

                                 
Query: 411    ttcaccttgatggccgtca 429
              || ||||||||| ||||||
Sbjct: 103229 ttaaccttgatgcccgtca 103211



 Score =  123 bits (62), Expect = 5e-25
 Identities = 107/122 (87%)
 Strand = Plus / Minus

                                                                         
Query: 161   aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 220
             ||||| ||||||||||||||||||||||| ||| | ||| |||||||||| || |||| |
Sbjct: 92274 aggcgaaagttgttgcaggtcgtctgccgcaacgggaggtaggagctgaaacccagccgc 92215

                                                                         
Query: 221   gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 280
             | || || ||| || |||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 92214 gacccctccaggtcaaactccagcaggttgtcctccatcatgtgcccgccgatcaccacc 92155

               
Query: 281   ga 282
             ||
Sbjct: 92154 ga 92153



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 109/129 (84%)
 Strand = Plus / Minus

                                                                         
Query: 158   ccaaggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagc 217
             |||||| | ||| ||||||||||||||||| | ||| | ||| ||||| |||| || |||
Sbjct: 96657 ccaaggtgaaagctgttgcaggtcgtctgcagcaacgggaggtaggaggtgaaacccagc 96598

                                                                         
Query: 218   ctcgcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcacc 277
             |  | || || ||| ||||||||||||||||||||||||||| |||| || |||||||||
Sbjct: 96597 cgtgacccctccaggtcgaactccagcaggttgtcctccatcatgtgtccgccgatcacc 96538

                      
Query: 278   accgacgtc 286
             |||||||||
Sbjct: 96537 accgacgtc 96529



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 48/51 (94%)
 Strand = Plus / Minus

                                                                 
Query: 236    aactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtc 286
              |||||||||||||||||||||||| ||||||| |||||||| |||||||||
Sbjct: 103640 aactccagcaggttgtcctccatcatgtgcccaccgatcacaaccgacgtc 103590
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  167 bits (84), Expect = 4e-38
 Identities = 126/140 (90%)
 Strand = Plus / Minus

                                                                            
Query: 283      cgtccgtgaccgccttgtggatggaggtctccagcacggtgtagggcgccaccgtgctga 342
                |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| |
Sbjct: 19488705 cgtcggtgaccgccttgtggatggaggtctccagcacggtgtagggggtcaccgtgctca 19488646

                                                                            
Query: 343      gcttggtgccgccgccgccctgcttgtcgatggccagcagcgaggcgttcagcggcacgg 402
                |||||||||| ||  | |||| ||||| |||||| |||||||  | ||||||||||||||
Sbjct: 19488645 gcttggtgccacccactcccttcttgttgatggcaagcagcgtcgtgttcagcggcacgg 19488586

                                    
Query: 403      cgcggccgttcaccttgatg 422
                ||||||||||||||||||||
Sbjct: 19488585 cgcggccgttcaccttgatg 19488566



 Score =  141 bits (71), Expect = 2e-30
 Identities = 128/147 (87%)
 Strand = Plus / Minus

                                                                            
Query: 283      cgtccgtgaccgccttgtggatggaggtctccagcacggtgtagggcgccaccgtgctga 342
                |||| ||||||||||||| |||||||||||||||||||||||| || | || | |||| |
Sbjct: 19495584 cgtcggtgaccgccttgtagatggaggtctccagcacggtgtaaggggacaacatgctca 19495525

                                                                            
Query: 343      gcttggtgccgccgccgccctgcttgtcgatggccagcagcgaggcgttcagcggcacgg 402
                |||||||||||||  | ||   |||| |||||||||||||||  |||||||| |||||||
Sbjct: 19495524 gcttggtgccgcccactccgctcttggcgatggccagcagcgtcgcgttcaggggcacgg 19495465

                                           
Query: 403      cgcggccgttcaccttgatggccgtca 429
                |||||||||||||||||||| ||||||
Sbjct: 19495464 cgcggccgttcaccttgatgcccgtca 19495438



 Score =  129 bits (65), Expect = 8e-27
 Identities = 122/141 (86%)
 Strand = Plus / Minus

                                                                            
Query: 289      tgaccgccttgtggatggaggtctccagcacggtgtagggcgccaccgtgctgagcttgg 348
                |||||||||||| |||||||||||||||||||||||| || | | ||||||| ||| |||
Sbjct: 19491195 tgaccgccttgtagatggaggtctccagcacggtgtaaggagacgccgtgctcagcgtgg 19491136

                                                                            
Query: 349      tgccgccgccgccctgcttgtcgatggccagcagcgaggcgttcagcggcacggcgcggc 408
                |||||||  |||| | ||||||||| ||||  ||||  |||||||| |||||| ||||||
Sbjct: 19491135 tgccgcctacgccattcttgtcgattgccaagagcgtcgcgttcagtggcacgtcgcggc 19491076

                                     
Query: 409      cgttcaccttgatggccgtca 429
                |||||||||||||| ||||||
Sbjct: 19491075 cgttcaccttgatgcccgtca 19491055



 Score =  129 bits (65), Expect = 8e-27
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                            
Query: 161      aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 220
                ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |
Sbjct: 19489063 aggcgaaagttgttgcaggtcgtttgccggaacaggagggaggagctgaaccccagccgc 19489004

                                                                            
Query: 221      gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 280
                |  | |  ||| || |||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 19489003 gatcccaccaggtcaaactccagcaggttgtcctccatcatgtgaccgccgatcaccacc 19488944

                     
Query: 281      gacgt 285
                |||||
Sbjct: 19488943 gacgt 19488939



 Score =  125 bits (63), Expect = 1e-25
 Identities = 120/139 (86%)
 Strand = Plus / Minus

                                                                            
Query: 291      accgccttgtggatggaggtctccagcacggtgtagggcgccaccgtgctgagcttggtg 350
                ||||||| |||||||||  ||||||||||||||||||| | ||||||||| |||||||||
Sbjct: 19502637 accgcctggtggatggatctctccagcacggtgtagggggacaccgtgcttagcttggtg 19502578

                                                                            
Query: 351      ccgccgccgccctgcttgtcgatggccagcagcgaggcgttcagcggcacggcgcggccg 410
                |||||  | || | ||||||||||||||||||||  ||||| | |||||||| | |||||
Sbjct: 19502577 ccgcccactcctttcttgtcgatggccagcagcgtcgcgtttaccggcacggtgtggccg 19502518

                                   
Query: 411      ttcaccttgatggccgtca 429
                || ||||||||| ||||||
Sbjct: 19502517 ttaaccttgatgcccgtca 19502499



 Score =  123 bits (62), Expect = 5e-25
 Identities = 107/122 (87%)
 Strand = Plus / Minus

                                                                            
Query: 161      aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 220
                ||||| ||||||||||||||||||||||| ||| | ||| |||||||||| || |||| |
Sbjct: 19491562 aggcgaaagttgttgcaggtcgtctgccgcaacgggaggtaggagctgaaacccagccgc 19491503

                                                                            
Query: 221      gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 280
                | || || ||| || |||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 19491502 gacccctccaggtcaaactccagcaggttgtcctccatcatgtgcccgccgatcaccacc 19491443

                  
Query: 281      ga 282
                ||
Sbjct: 19491442 ga 19491441



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 109/129 (84%)
 Strand = Plus / Minus

                                                                            
Query: 158      ccaaggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagc 217
                |||||| | ||| ||||||||||||||||| | ||| | ||| ||||| |||| || |||
Sbjct: 19495945 ccaaggtgaaagctgttgcaggtcgtctgcagcaacgggaggtaggaggtgaaacccagc 19495886

                                                                            
Query: 218      ctcgcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcacc 277
                |  | || || ||| ||||||||||||||||||||||||||| |||| || |||||||||
Sbjct: 19495885 cgtgacccctccaggtcgaactccagcaggttgtcctccatcatgtgtccgccgatcacc 19495826

                         
Query: 278      accgacgtc 286
                |||||||||
Sbjct: 19495825 accgacgtc 19495817



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 48/51 (94%)
 Strand = Plus / Minus

                                                                   
Query: 236      aactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtc 286
                |||||||||||||||||||||||| ||||||| |||||||| |||||||||
Sbjct: 19502928 aactccagcaggttgtcctccatcatgtgcccaccgatcacaaccgacgtc 19502878



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 394      gcggcacggcgcggccgttca 414
                |||||||||||||||||||||
Sbjct: 27896417 gcggcacggcgcggccgttca 27896437
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>dbj|AK070554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061A08, full
           insert sequence
          Length = 1474

 Score =  167 bits (84), Expect = 4e-38
 Identities = 126/140 (90%)
 Strand = Plus / Minus

                                                                       
Query: 283 cgtccgtgaccgccttgtggatggaggtctccagcacggtgtagggcgccaccgtgctga 342
           |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| |
Sbjct: 985 cgtcggtgaccgccttgtggatggaggtctccagcacggtgtagggggtcaccgtgctca 926

                                                                       
Query: 343 gcttggtgccgccgccgccctgcttgtcgatggccagcagcgaggcgttcagcggcacgg 402
           |||||||||| ||  | |||| ||||| |||||| |||||||  | ||||||||||||||
Sbjct: 925 gcttggtgccacccactcccttcttgttgatggcaagcagcgtcgtgttcagcggcacgg 866

                               
Query: 403 cgcggccgttcaccttgatg 422
           ||||||||||||||||||||
Sbjct: 865 cgcggccgttcaccttgatg 846



 Score =  129 bits (65), Expect = 8e-27
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                        
Query: 161  aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 220
            ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |
Sbjct: 1343 aggcgaaagttgttgcaggtcgtttgccggaacaggagggaggagctgaaccccagccgc 1284

                                                                        
Query: 221  gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 280
            |  | |  ||| || |||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 1283 gatcccaccaggtcaaactccagcaggttgtcctccatcatgtgaccgccgatcaccacc 1224

                 
Query: 281  gacgt 285
            |||||
Sbjct: 1223 gacgt 1219
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>dbj|AK122177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148M15, full
            insert sequence
          Length = 1741

 Score =  125 bits (63), Expect = 1e-25
 Identities = 120/139 (86%)
 Strand = Plus / Minus

                                                                        
Query: 291  accgccttgtggatggaggtctccagcacggtgtagggcgccaccgtgctgagcttggtg 350
            ||||||| |||||||||  ||||||||||||||||||| | ||||||||| |||||||||
Sbjct: 1228 accgcctggtggatggatctctccagcacggtgtagggggacaccgtgcttagcttggtg 1169

                                                                        
Query: 351  ccgccgccgccctgcttgtcgatggccagcagcgaggcgttcagcggcacggcgcggccg 410
            |||||  | || | ||||||||||||||||||||  ||||| | |||||||| | |||||
Sbjct: 1168 ccgcccactcctttcttgtcgatggccagcagcgtcgcgtttaccggcacggtgtggccg 1109

                               
Query: 411  ttcaccttgatggccgtca 429
            || ||||||||| ||||||
Sbjct: 1108 ttaaccttgatgcccgtca 1090



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 48/51 (94%)
 Strand = Plus / Minus

                                                               
Query: 236  aactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtc 286
            |||||||||||||||||||||||| ||||||| |||||||| |||||||||
Sbjct: 1519 aactccagcaggttgtcctccatcatgtgcccaccgatcacaaccgacgtc 1469
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                            
Query: 287      cgtgaccgccttgtggatggaggtctccagcacggtgtagggcgccaccgtgctgagctt 346
                ||||||||||| ||||||||||||||||||||||||||||||||  |||||||| |||||
Sbjct: 15505718 cgtgaccgcctcgtggatggaggtctccagcacggtgtagggcgagaccgtgctcagctt 15505659

                       
Query: 347      ggtgccg 353
                |||||||
Sbjct: 15505658 ggtgccg 15505652



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                 
Query: 233      tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
                |||||| |||||||| | ||||||||| |||| || |||||||||||||
Sbjct: 15506035 tcgaacaccagcaggatctcctccatcatgtggccgccgatcaccaccg 15505987



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 378      agcagcgaggcgttcagcggcacggcgcggccgttcacc 416
                |||||||  ||||||||||||||||||||| ||| ||||
Sbjct: 15505645 agcagcgtcgcgttcagcggcacggcgcggtcgtccacc 15505607
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>dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0689B09
          Length = 144932

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                         
Query: 287   cgtgaccgccttgtggatggaggtctccagcacggtgtagggcgccaccgtgctgagctt 346
             ||||||||||| ||||||||||||||||||||||||||||||||  |||||||| |||||
Sbjct: 26573 cgtgaccgcctcgtggatggaggtctccagcacggtgtagggcgagaccgtgctcagctt 26514

                    
Query: 347   ggtgccg 353
             |||||||
Sbjct: 26513 ggtgccg 26507



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 233   tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
             |||||| |||||||| | ||||||||| |||| || |||||||||||||
Sbjct: 26890 tcgaacaccagcaggatctcctccatcatgtggccgccgatcaccaccg 26842



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 378   agcagcgaggcgttcagcggcacggcgcggccgttcacc 416
             |||||||  ||||||||||||||||||||| ||| ||||
Sbjct: 26500 agcagcgtcgcgttcagcggcacggcgcggtcgtccacc 26462
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>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1299_A11
          Length = 160099

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                          
Query: 287    cgtgaccgccttgtggatggaggtctccagcacggtgtagggcgccaccgtgctgagctt 346
              ||||||||||| ||||||||||||||||||||||||||||||||  |||||||| |||||
Sbjct: 155010 cgtgaccgcctcgtggatggaggtctccagcacggtgtagggcgagaccgtgctcagctt 154951

                     
Query: 347    ggtgccg 353
              |||||||
Sbjct: 154950 ggtgccg 154944



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                               
Query: 233    tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
              |||||| |||||||| | ||||||||| |||| || |||||||||||||
Sbjct: 155327 tcgaacaccagcaggatctcctccatcatgtggccgccgatcaccaccg 155279



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                     
Query: 378    agcagcgaggcgttcagcggcacggcgcggccgttcacc 416
              |||||||  ||||||||||||||||||||| ||| ||||
Sbjct: 154937 agcagcgtcgcgttcagcggcacggcgcggtcgtccacc 154899
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>ref|NM_190069.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1269

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 233  tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
            |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 1181 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 1133
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                 
Query: 233      tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
                |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 41126162 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 41126210
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>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504E02
          Length = 137468

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 233   tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
             |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 23217 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 23265
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>dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-C07, full
            insert sequence
          Length = 1405

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 233  tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
            |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 1102 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 1054
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>gb|AC012049.8| Homo sapiens chromosome 10 clone RP11-76F22, complete sequence
          Length = 142656

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 25     gttgattattcaaacagccaaa 46
              ||||||||||||||||||||||
Sbjct: 119629 gttgattattcaaacagccaaa 119650
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>gb|AC022537.8| Homo sapiens chromosome 10 clone RP11-40C11, complete sequence
          Length = 154939

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 25    gttgattattcaaacagccaaa 46
             ||||||||||||||||||||||
Sbjct: 70617 gttgattattcaaacagccaaa 70638
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>dbj|AB007850.1| Athalia rosae mRNA for vitellogenin, complete cds
          Length = 5783

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 399  acggcgcggccgttcaccttgatggc 424
            |||||||| |||||||||||||||||
Sbjct: 4898 acggcgcgtccgttcaccttgatggc 4873
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>ref|NM_001031296.1| Gallus gallus splicing factor, arginine/serine-rich 11 (SFRS11), mRNA
          Length = 2625

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 40   agccaaaacaaaacccagggggaaa 64
            ||||||||||||||||| |||||||
Sbjct: 2034 agccaaaacaaaacccacggggaaa 2010
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>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02,
              complete sequence
          Length = 157106

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 394    gcggcacggcgcggccgttca 414
              |||||||||||||||||||||
Sbjct: 126834 gcggcacggcgcggccgttca 126854
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>gb|AE009101.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 127
            of 256 of the complete sequence
          Length = 12643

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 317  cacggtgtagggcgccaccgt 337
            |||||||||||||||||||||
Sbjct: 7000 cacggtgtagggcgccaccgt 6980
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>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16
          Length = 348642

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 352    cgccgccgccctgcttgtcga 372
              |||||||||||||||||||||
Sbjct: 317495 cgccgccgccctgcttgtcga 317515
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>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 352    cgccgccgccctgcttgtcga 372
              |||||||||||||||||||||
Sbjct: 267410 cgccgccgccctgcttgtcga 267390
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>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 352    cgccgccgccctgcttgtcga 372
              |||||||||||||||||||||
Sbjct: 293153 cgccgccgccctgcttgtcga 293133
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>emb|AJ720592.1| Gallus gallus mRNA for hypothetical protein, clone 20o8
          Length = 2625

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 40   agccaaaacaaaacccagggggaaa 64
            ||||||||||||||||| |||||||
Sbjct: 2034 agccaaaacaaaacccacggggaaa 2010
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 317     cacggtgtagggcgccaccgt 337
               |||||||||||||||||||||
Sbjct: 1402073 cacggtgtagggcgccaccgt 1402053
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>emb|CR389009.1| Gallus gallus finished cDNA, clone ChEST177c22
          Length = 759

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 40  agccaaaacaaaacccagggggaaa 64
           ||||||||||||||||| |||||||
Sbjct: 194 agccaaaacaaaacccacggggaaa 170
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 378   agcagcgaggcgttcagcggc 398
             |||||||||||||||||||||
Sbjct: 94864 agcagcgaggcgttcagcggc 94884
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>emb|X05768.1|RVCYC Rhodopseudomonas viridis gene for the cytochrome c subunit of the
           photosynthetic reaction centre
          Length = 1085

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 373 tggccagcagcgaggcgttcagcgg 397
           ||||| |||||||||||||||||||
Sbjct: 948 tggccggcagcgaggcgttcagcgg 924
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>ref|XM_464952.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3558

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 72   acaaattttgactgcaatct 91
            ||||||||||||||||||||
Sbjct: 1744 acaaattttgactgcaatct 1763
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>ref|XM_468621.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 350 gccgccgccgccctgcttgt 369
           ||||||||||||||||||||
Sbjct: 654 gccgccgccgccctgcttgt 635
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>gb|AY023295.1| Oryza sativa microsatellite MRG5620 containing (GGC)X10, genomic
           sequence
          Length = 230

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 350 gccgccgccgccctgcttgt 369
           ||||||||||||||||||||
Sbjct: 112 gccgccgccgccctgcttgt 93
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   cggcgcggccgttcaccttg 419
             ||||||||||||||||||||
Sbjct: 10904 cggcgcggccgttcaccttg 10923
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 365     cttgtcgatggccagcagcg 384
               ||||||||||||||||||||
Sbjct: 2089555 cttgtcgatggccagcagcg 2089574
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>gb|AC146701.9| Mus musculus chromosome 10, clone RP24-142C15, complete sequence
          Length = 121683

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 121155 aaacacacaaacaaattttg 121136



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 116267 aaacacacaaacaaattttg 116248



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 113475 aaacacacaaacaaattttg 113456



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 108605 aaacacacaaacaaattttg 108586



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 104518 aaacacacaaacaaattttg 104499
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 350      gccgccgccgccctgcttgt 369
                ||||||||||||||||||||
Sbjct: 16676839 gccgccgccgccctgcttgt 16676820
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>gb|AC132461.3| Mus musculus chromosome 5 clone RP23-33C9, complete sequence
          Length = 196803

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    gcaagcacacatatcatctt 118
             ||||||||||||||||||||
Sbjct: 56902 gcaagcacacatatcatctt 56921
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>emb|CT009746.6| Zebrafish DNA sequence from clone CH73-236M19 in linkage group 18,
             complete sequence
          Length = 30929

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    gggggaaacacacaaacaaa 76
             ||||||||||||||||||||
Sbjct: 14594 gggggaaacacacaaacaaa 14613
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>gb|AC111096.15| Mus musculus chromosome 3, clone RP23-174B18, complete sequence
          Length = 209936

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 156    acccaaggcggaagttgttgcagg 179
              ||||||||| ||||||||||||||
Sbjct: 191105 acccaaggctgaagttgttgcagg 191128
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>gb|AC113433.8| Oryza sativa chromosome 3 BAC OSJNBb0108E08 genomic sequence, complete
             sequence
          Length = 129167

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   gccgccgccgccctgcttgt 369
             ||||||||||||||||||||
Sbjct: 27632 gccgccgccgccctgcttgt 27613
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 346     tggtgccgccgccgccctgc 365
               ||||||||||||||||||||
Sbjct: 2090483 tggtgccgccgccgccctgc 2090464
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 345    ttggtgccgccgccgccctgcttg 368
              |||||||||||||||||| |||||
Sbjct: 759998 ttggtgccgccgccgcccggcttg 760021
to top
>emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O16 on chromosome 22, complete
             sequence
          Length = 50502

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   cagggaggagctgaacccga 215
             ||||||||||||||||||||
Sbjct: 38983 cagggaggagctgaacccga 38964
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 400     cggcgcggccgttcaccttg 419
               ||||||||||||||||||||
Sbjct: 1370188 cggcgcggccgttcaccttg 1370207
to top
>gb|BC075800.1| Homo sapiens protein kinase, cAMP-dependent, regulatory, type II,
           beta, mRNA (cDNA clone MGC:87711 IMAGE:30331962),
           complete cds
          Length = 3745

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 225 gctgcagatcgaactccagcaggt 248
           |||||||| |||||||||||||||
Sbjct: 317 gctgcagagcgaactccagcaggt 294
to top
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 347   ggtgccgccgccgccctgcttgtcgatg 374
             |||||||||||||||| || ||||||||
Sbjct: 17520 ggtgccgccgccgccccgcatgtcgatg 17547
to top
>dbj|AK128639.1| Homo sapiens cDNA FLJ46798 fis, clone TRACH3031660, highly  similar
           to cAMP-dependent protein kinase type II-beta regulatory
           chain
          Length = 3470

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 225 gctgcagatcgaactccagcaggt 248
           |||||||| |||||||||||||||
Sbjct: 127 gctgcagagcgaactccagcaggt 104
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 400     cggcgcggccgttcaccttg 419
               ||||||||||||||||||||
Sbjct: 1263157 cggcgcggccgttcaccttg 1263138
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 350      gccgccgccgccctgcttgt 369
                ||||||||||||||||||||
Sbjct: 16670472 gccgccgccgccctgcttgt 16670453
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 29       attattcaaacagccaaaacaaaaccca 56
                ||||| ||||||||||||| ||||||||
Sbjct: 23775776 attatccaaacagccaaaaaaaaaccca 23775803



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 72       acaaattttgactgcaatct 91
                ||||||||||||||||||||
Sbjct: 10505544 acaaattttgactgcaatct 10505563
to top
>dbj|D90334.2| Homo sapiens HGF gene for hepatocyte growth factor, complete cds
          Length = 11451

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    attattcaaacagccaaaacaaaa 52
             |||||||||||||||||| |||||
Sbjct: 10145 attattcaaacagccaaaccaaaa 10122
to top
>gb|AY246560.1| Homo sapiens hepatocyte growth factor (hepapoietin A; scatter factor)
             (HGF) gene, complete cds
          Length = 73491

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    attattcaaacagccaaaacaaaa 52
             |||||||||||||||||| |||||
Sbjct: 71267 attattcaaacagccaaaccaaaa 71244
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 355     cgccgccctgcttgtcgatggcca 378
               |||||||||||||||||| |||||
Sbjct: 1590641 cgccgccctgcttgtcgacggcca 1590664
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 326     gggcgccaccgtgctgagcttggtgccg 353
               ||||||||||||||||| | ||||||||
Sbjct: 3628952 gggcgccaccgtgctgaacgtggtgccg 3628925
to top
>dbj|AP005694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0063E14
          Length = 174415

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    acaaattttgactgcaatct 91
             ||||||||||||||||||||
Sbjct: 86712 acaaattttgactgcaatct 86731
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>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1058_F07
          Length = 95841

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 29    attattcaaacagccaaaacaaaaccca 56
             ||||| ||||||||||||| ||||||||
Sbjct: 86360 attatccaaacagccaaaaaaaaaccca 86387
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>ref|XM_317601.2| Anopheles gambiae str. PEST ENSANGP00000010004 (ENSANGG00000007515),
            partial mRNA
          Length = 3033

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 365  cttgtcgatggccagcagcgaggc 388
            |||||||| |||||||||||||||
Sbjct: 1857 cttgtcgacggccagcagcgaggc 1834
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>gb|AC004960.1|AC004960 Homo sapiens PAC clone RP5-1098B1 from 7q11.23-q21, complete sequence
          Length = 143834

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    attattcaaacagccaaaacaaaa 52
             |||||||||||||||||| |||||
Sbjct: 47574 attattcaaacagccaaaccaaaa 47597
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 365     cttgtcgatggccagcagcg 384
               ||||||||||||||||||||
Sbjct: 1844986 cttgtcgatggccagcagcg 1845005
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>gb|AC112685.16| Mus musculus chromosome 3, clone RP23-340E10, complete sequence
          Length = 248750

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 156   acccaaggcggaagttgttgcagg 179
             ||||||||| ||||||||||||||
Sbjct: 12934 acccaaggctgaagttgttgcagg 12957
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 365     cttgtcgatggccagcagcg 384
               ||||||||||||||||||||
Sbjct: 4868585 cttgtcgatggccagcagcg 4868566
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>gb|AC170751.2| Mus musculus BAC clone CH25-484K21 from chromosome 10, complete
             sequence
          Length = 105368

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 33049 aaacacacaaacaaattttg 33068



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 28962 aaacacacaaacaaattttg 28981



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 24092 aaacacacaaacaaattttg 24111



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 21300 aaacacacaaacaaattttg 21319



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 16412 aaacacacaaacaaattttg 16431
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>emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on chromosome 11, complete
             sequence
          Length = 149561

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   actccagcaggttgtcctcc 256
             ||||||||||||||||||||
Sbjct: 28862 actccagcaggttgtcctcc 28881
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>emb|AL626784.11| Mouse DNA sequence from clone RP23-392J14 on chromosome 4, complete
             sequence
          Length = 211585

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    tcaaacagccaaaacaaaac 53
             ||||||||||||||||||||
Sbjct: 19090 tcaaacagccaaaacaaaac 19071


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,972,829
Number of Sequences: 3902068
Number of extensions: 4972829
Number of successful extensions: 97435
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95929
Number of HSP's gapped (non-prelim): 1501
length of query: 429
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 407
effective length of database: 17,147,199,772
effective search space: 6978910307204
effective search space used: 6978910307204
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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