>gb|AC129332.6| Mus musculus BAC clone RP23-91I19 from chromosome 9, complete sequence
          Length = 219117

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 241   aggtccacggttacatgctgcatgc 265
             |||||||||||||| ||||||||||
Sbjct: 34228 aggtccacggttacctgctgcatgc 34252

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 260      gcatgcacaagaatatacaat 280
                |||||||||||||||||||||
Sbjct: 22582770 gcatgcacaagaatatacaat 22582790

>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1097D05
          Length = 144879

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 260   gcatgcacaagaatatacaat 280
             |||||||||||||||||||||
Sbjct: 98507 gcatgcacaagaatatacaat 98527

>gb|AC153978.5| Mus musculus 10 BAC RP24-217I1 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 172497

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 219   cagagaagctaaccaaaagga 239
             |||||||||||||||||||||
Sbjct: 47349 cagagaagctaaccaaaagga 47329

>gb|AY462110.1| Pleurotus djamor PDSTE3.3 mating-type pheromone receptor (STE3.3) gene,
             STE3.3-B21 allele, complete cds; putative PDphb1 mating
             pheromone precursor (phb1) gene, phb1-B21 allele, complete
             cds; reductase AKOR1 (AKOR1), reductase AKOR2 (AKOR2),
             beta-1,3 exoglucanase precursor-like protein (UPB1),
             hypothetical protein PDUPB2 (UPB2) genes, complete cds;
             mitochondrial ribosome small subunit component RPS19
             (RPS19)gene, complete cds, nuclear gene for mitochondrial
             product; and p21 activated kinase-like protein (CLA4)
             genes, complete cds; and 4-nitrobenzyl alcohol
             dehydrogenase-like protein (CHODH) gene, partial cds
          Length = 38261

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 342   actacctatcatctatggat 361
             ||||||||||||||||||||
Sbjct: 21137 actacctatcatctatggat 21118

>ref|XM_785251.1| PREDICTED: Strongylocentrotus purpuratus similar to THAP domain
           containing 9 (LOC585422), mRNA
          Length = 1686

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 36  aaagtatacacattacacac 55
           ||||||||||||||||||||
Sbjct: 282 aaagtatacacattacacac 301

>emb|BX248585.1| Blochmannia floridanus complete genome; segment 2/3
          Length = 267050

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 366   tctatgattgatggattagctaaa 389
             |||||||||||||||||| |||||
Sbjct: 61225 tctatgattgatggattatctaaa 61248

>emb|AL663022.4|OSJN00222 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0054D14,
             complete sequence
          Length = 160587

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 118   tccaaacactgcctgacacgaccagaaa 145
             |||||||||||| ||| |||||||||||
Sbjct: 71141 tccaaacactgcttgagacgaccagaaa 71114

>emb|AL772295.5| Zebrafish DNA sequence from clone CH211-14A17 in linkage group 2 Contains
              a novel gene for a protein similar to apoptotic chromatin
              condensation inducer in the nucleus (ACINUS), two novel
              genes, a novel gene for a protein with  a short chain
              dehydrogenase domain, a novel homeodomain gene, two novel
              genes for proteins with a zona pellucida-like domain, a
              novel ubiquitin-like gene, a novel gene similar to AP1G2
              (adaptor-related protein complex 1, gamma 2 subunit), a
              novel gene similar to SLC7A8 (solute carrier family 7
              (cationic amino acid transporter, y+ system), member 8), a
              novel gene similar to human and mouse SKB1 homolog (S.
              pombe), a gene for a novel proteasome, the psmb5 gene for
              proteasome (prosome, macropain) subunit, beta type, 5 and
              two CpG islands, complete sequence
          Length = 194351

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    agaaactcaccacagctaca 160
              ||||||||||||||||||||
Sbjct: 118950 agaaactcaccacagctaca 118969

>emb|AL662986.3|OSJN00187 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087H01,
             complete sequence
          Length = 166906

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 118   tccaaacactgcctgacacgaccagaaa 145
             |||||||||||| ||| |||||||||||
Sbjct: 65178 tccaaacactgcttgagacgaccagaaa 65205

>gb|AC162891.6| Mus musculus chromosome 1, clone RP24-263F3, complete sequence
          Length = 148545

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 261   catgcacaagaatatacaatggcc 284
             ||||||||||||| ||||||||||
Sbjct: 32737 catgcacaagaatttacaatggcc 32760

>emb|BX324001.6| Zebrafish DNA sequence from clone CH211-209D21 in linkage group 2,
             complete sequence
          Length = 147684

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   agaaactcaccacagctaca 160
             ||||||||||||||||||||
Sbjct: 74704 agaaactcaccacagctaca 74685

>ref|XM_623434.1| PREDICTED: Apis mellifera similar to CG9068-PA (LOC551038), mRNA
          Length = 2646

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 tctattatctcctctccgat 195
           ||||||||||||||||||||
Sbjct: 27  tctattatctcctctccgat 8

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 118      tccaaacactgcctgacacgaccagaaa 145
                |||||||||||| ||| |||||||||||
Sbjct: 15054680 tccaaacactgcttgagacgaccagaaa 15054653



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 118      tccaaacactgcctgacacgaccagaaa 145
                |||||||||||| ||| |||||||||||
Sbjct: 14332258 tccaaacactgcttgagacgaccagaaa 14332285

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 260      gcatgcacaagaatatacaa 279
                ||||||||||||||||||||
Sbjct: 17956254 gcatgcacaagaatatacaa 17956235

>gb|AC073485.3| Homo sapiens BAC clone RP11-798J16 from 2, complete sequence
          Length = 140811

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     cattgaaacgtatatgcata 20
             ||||||||||||||||||||
Sbjct: 81923 cattgaaacgtatatgcata 81942

>dbj|AP004022.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1126_B06
          Length = 99637

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 260   gcatgcacaagaatatacaa 279
             ||||||||||||||||||||
Sbjct: 90887 gcatgcacaagaatatacaa 90868

>dbj|AP005285.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1003_F04
          Length = 139563

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 260   gcatgcacaagaatatacaa 279
             ||||||||||||||||||||
Sbjct: 17848 gcatgcacaagaatatacaa 17829

>gb|AC167139.9| Mus musculus chromosome 1, clone RP23-397C14, complete sequence
          Length = 198105

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 261   catgcacaagaatatacaatggcc 284
             ||||||||||||| ||||||||||
Sbjct: 18125 catgcacaagaatttacaatggcc 18102

>gb|AC026187.4| Homo sapiens chromosome 3 clone RP11-306H5 map 3p, complete sequence
          Length = 184087

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   ttaatctattatctcctctc 191
             ||||||||||||||||||||
Sbjct: 38467 ttaatctattatctcctctc 38448


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,789,907
Number of Sequences: 3902068
Number of extensions: 2789907
Number of successful extensions: 49853
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49618
Number of HSP's gapped (non-prelim): 235
length of query: 411
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 389
effective length of database: 17,147,199,772
effective search space: 6670260711308
effective search space used: 6670260711308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)