>gb|U08135.1|HVU08135 Hordeum vulgare photosystem-I PSI-F subunit precursor mRNA,
           complete cds
          Length = 990

 Score =  188 bits (95), Expect = 2e-45
 Identities = 101/103 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tatacaggattgggttcagtttcttaaatacaagagaggttccatttgtccatgatccta 60
           |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 922 tatacaagattgggttcagtttcttaaatacaagagaggttccatttctccatgatccta 863

                                                      
Query: 61  tcagctcctacaccaagcccacacagatcgacaccacaagccc 103
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 tcagctcctacaccaagcccacacagatcgacaccacaagccc 820

>ref|NM_184976.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1038

 Score = 54.0 bits (27), Expect = 8e-05
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 20  tttcttaaatacaagagaggttccatttgtccatgatcctatcagctcctacacc 74
           |||||||| ||||| |||  |||||||  |||||||||||||||||| |||||||
Sbjct: 921 tttcttaagtacaacagatcttccattcctccatgatcctatcagcttctacacc 867

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 8e-05
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                       
Query: 20       tttcttaaatacaagagaggttccatttgtccatgatcctatcagctcctacacc 74
                |||||||| ||||| |||  |||||||  |||||||||||||||||| |||||||
Sbjct: 31969219 tttcttaagtacaacagatcttccattcctccatgatcctatcagcttctacacc 31969273

>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete
             sequence
          Length = 144306

 Score = 54.0 bits (27), Expect = 8e-05
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                    
Query: 20    tttcttaaatacaagagaggttccatttgtccatgatcctatcagctcctacacc 74
             |||||||| ||||| |||  |||||||  |||||||||||||||||| |||||||
Sbjct: 61171 tttcttaagtacaacagatcttccattcctccatgatcctatcagcttctacacc 61225

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 8e-05
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                       
Query: 20       tttcttaaatacaagagaggttccatttgtccatgatcctatcagctcctacacc 74
                |||||||| ||||| |||  |||||||  |||||||||||||||||| |||||||
Sbjct: 32059731 tttcttaagtacaacagatcttccattcctccatgatcctatcagcttctacacc 32059785

>dbj|AK069791.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031N02, full
           insert sequence
          Length = 967

 Score = 54.0 bits (27), Expect = 8e-05
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 20  tttcttaaatacaagagaggttccatttgtccatgatcctatcagctcctacacc 74
           |||||||| ||||| |||  |||||||  |||||||||||||||||| |||||||
Sbjct: 890 tttcttaagtacaacagatcttccattcctccatgatcctatcagcttctacacc 836

>dbj|AK060493.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-D02, full
           insert sequence
          Length = 997

 Score = 54.0 bits (27), Expect = 8e-05
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 20  tttcttaaatacaagagaggttccatttgtccatgatcctatcagctcctacacc 74
           |||||||| ||||| |||  |||||||  |||||||||||||||||| |||||||
Sbjct: 920 tttcttaagtacaacagatcttccattcctccatgatcctatcagcttctacacc 866

>dbj|AK059890.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C12, full
           insert sequence
          Length = 990

 Score = 54.0 bits (27), Expect = 8e-05
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 20  tttcttaaatacaagagaggttccatttgtccatgatcctatcagctcctacacc 74
           |||||||| ||||| |||  |||||||  |||||||||||||||||| |||||||
Sbjct: 913 tttcttaagtacaacagatcttccattcctccatgatcctatcagcttctacacc 859

>gb|AF093634.1|AF093634 Oryza sativa photosystem-1 F subunit precursor (PSI-F) mRNA,
           complete cds
          Length = 996

 Score = 54.0 bits (27), Expect = 8e-05
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 20  tttcttaaatacaagagaggttccatttgtccatgatcctatcagctcctacacc 74
           |||||||| ||||| |||  |||||||  |||||||||||||||||| |||||||
Sbjct: 901 tttcttaagtacaacagatcttccattcctccatgatcctatcagcttctacacc 847

>gb|AC094571.8| Rattus norvegicus 20 BAC CH230-4L21 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 230137

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    tcttaaatacaagagaggtt 41
             ||||||||||||||||||||
Sbjct: 82654 tcttaaatacaagagaggtt 82673

>gb|AC105282.5| Homo sapiens chromosome 18, clone RP11-452F20, complete sequence
          Length = 167258

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    ggttcagtttcttaaataca 32
             ||||||||||||||||||||
Sbjct: 17437 ggttcagtttcttaaataca 17456

>gb|AC010679.6| Homo sapiens BAC clone RP11-128O11 from 2, complete sequence
          Length = 188937

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 48     gtccatgatcctatcagctcctac 71
              ||||||||||| ||||||||||||
Sbjct: 179568 gtccatgatccaatcagctcctac 179591

>gb|AC163450.5| Mus musculus chromosome 1, clone RP23-209F20, complete sequence
          Length = 182102

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 35     agaggttccatttgtccat 53
              |||||||||||||||||||
Sbjct: 130546 agaggttccatttgtccat 130564

>emb|Z98743.1|HS181C9 Human DNA sequence from clone RP1-181C9 on chromosome 22q13.2-13.33,
             complete sequence
          Length = 92472

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 66    tcctacaccaagcccacac 84
             |||||||||||||||||||
Sbjct: 61213 tcctacaccaagcccacac 61231

>emb|AL139288.15| Human DNA sequence from clone RP5-915N17 on chromosome 1q42.11-42.3,
              complete sequence
          Length = 151563

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 19     gtttcttaaatacaagaga 37
              |||||||||||||||||||
Sbjct: 131814 gtttcttaaatacaagaga 131796

>emb|AL137251.5| Human DNA sequence from clone RP1-141N5 on chromosome 6 Contains the 3'
             end of the gene for KIAA1913 protein, complete sequence
          Length = 122354

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    ccatgatcctatcagctcc 68
             |||||||||||||||||||
Sbjct: 97398 ccatgatcctatcagctcc 97380

>emb|AL031433.4|HS171N11 Human DNA sequence from clone RP1-171N11 on chromosome 6q23 Contains
             the 5' end of a novel gene, the gene for UC28 protein
             (UROC28) and a CpG island, complete sequence
          Length = 129227

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    catgatcctatcagctcct 69
             |||||||||||||||||||
Sbjct: 79262 catgatcctatcagctcct 79244

>gb|AC120797.9| Mus musculus chromosome 18, clone RP24-81D18, complete sequence
          Length = 210631

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 57     cctatcagctcctacacca 75
              |||||||||||||||||||
Sbjct: 132618 cctatcagctcctacacca 132636

>gb|S82598.1| interleukin-8=neutrophil and T-lymphocyte chemotactic and
           activating factor [cattle, alveolar macrophages, mRNA,
           643 nt]
          Length = 643

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 71  caccaagcccacacagatc 89
           |||||||||||||||||||
Sbjct: 414 caccaagcccacacagatc 396

>gb|AC083909.20|AC083909 Mus musculus 1 BAC RP23-424A2 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 204857

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 35    agaggttccatttgtccat 53
             |||||||||||||||||||
Sbjct: 32254 agaggttccatttgtccat 32272


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 879,684
Number of Sequences: 3902068
Number of extensions: 879684
Number of successful extensions: 57579
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57528
Number of HSP's gapped (non-prelim): 51
length of query: 103
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 82
effective length of database: 17,151,101,840
effective search space: 1406390350880
effective search space used: 1406390350880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)