>ref|XM_467094.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1158

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 102/119 (85%), Gaps = 6/119 (5%)
 Strand = Plus / Minus

                                                                        
Query: 199  cgtcgggcatgacgacgacgagcccttcgtctccgc--ccgc----cacgattctgtagg 252
            |||||||||| |||||||||||||||||||||||||  ||||    |||||| ||| |||
Sbjct: 1114 cgtcgggcatcacgacgacgagcccttcgtctccgccaccgccggtcacgatgctgcagg 1055

                                                                       
Query: 253  acacatgcacgggcttgtcgtccctgatagccagctcctccagccccagctcgccccac 311
            | |||||||||||||||  | ||||||   |||||||||||||||||||||||| ||||
Sbjct: 1054 agacatgcacgggcttgctgcccctgagcaccagctcctccagccccagctcgctccac 996

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 102/119 (85%), Gaps = 6/119 (5%)
 Strand = Plus / Plus

                                                                            
Query: 199      cgtcgggcatgacgacgacgagcccttcgtctccgcc--cgcc----acgattctgtagg 252
                |||||||||| ||||||||||||||||||||||||||  ||||    ||||| ||| |||
Sbjct: 26368606 cgtcgggcatcacgacgacgagcccttcgtctccgccaccgccggtcacgatgctgcagg 26368665

                                                                           
Query: 253      acacatgcacgggcttgtcgtccctgatagccagctcctccagccccagctcgccccac 311
                | |||||||||||||||  | ||||||   |||||||||||||||||||||||| ||||
Sbjct: 26368666 agacatgcacgggcttgctgcccctgagcaccagctcctccagccccagctcgctccac 26368724

>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:P0491E01
          Length = 136150

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 102/119 (85%), Gaps = 6/119 (5%)
 Strand = Plus / Plus

                                                                          
Query: 199    cgtcgggcatgacgacgacgagcccttcgtctccgcc--cgcc----acgattctgtagg 252
              |||||||||| ||||||||||||||||||||||||||  ||||    ||||| ||| |||
Sbjct: 100958 cgtcgggcatcacgacgacgagcccttcgtctccgccaccgccggtcacgatgctgcagg 101017

                                                                         
Query: 253    acacatgcacgggcttgtcgtccctgatagccagctcctccagccccagctcgccccac 311
              | |||||||||||||||  | ||||||   |||||||||||||||||||||||| ||||
Sbjct: 101018 agacatgcacgggcttgctgcccctgagcaccagctcctccagccccagctcgctccac 101076

>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 102/119 (85%), Gaps = 6/119 (5%)
 Strand = Plus / Plus

                                                                         
Query: 199   cgtcgggcatgacgacgacgagcccttcgtctccgcc--cgcc----acgattctgtagg 252
             |||||||||| ||||||| ||||||||||||||||||  ||||    ||||| ||| |||
Sbjct: 91862 cgtcgggcatcacgacgatgagcccttcgtctccgccaccgccggtcacgatgctgcagg 91921

                                                                        
Query: 253   acacatgcacgggcttgtcgtccctgatagccagctcctccagccccagctcgccccac 311
             | |||||||||||||||  ||||||||   |||||||||||||||||||||||| ||||
Sbjct: 91922 agacatgcacgggcttgctgtccctgagcaccagctcctccagccccagctcgctccac 91980

>gb|AC013269.10| Homo sapiens BAC clone RP11-356I10 from 2, complete sequence
          Length = 165797

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 281    agccagctcctccagccccagctc 304
              ||||||||||||||||||||||||
Sbjct: 148577 agccagctcctccagccccagctc 148600



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 281   agccagctcctccagccccagctc 304
             ||||||||||||||||||||||||
Sbjct: 48193 agccagctcctccagccccagctc 48170

>gb|AC140481.3| Homo sapiens BAC clone RP11-1216L17 from 2, complete sequence
          Length = 219471

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 281    agccagctcctccagccccagctc 304
              ||||||||||||||||||||||||
Sbjct: 180065 agccagctcctccagccccagctc 180042

>gb|AC133459.9| Mus musculus chromosome 12, clone RP23-383O15, complete sequence
          Length = 227171

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 30    gaagtaaagtacaatttgtata 51
             ||||||||||||||||||||||
Sbjct: 32860 gaagtaaagtacaatttgtata 32839

>ref|NM_135619.1| Drosophila melanogaster CG17085-RA (CG17085), mRNA
          Length = 567

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 284 cagctcctccagccccagctcgcccc 309
           ||||||||||||| ||||||||||||
Sbjct: 96  cagctcctccagcaccagctcgcccc 71

>gb|AC007147.8|AC007147 Drosophila melanogaster, chromosome 2L, region 32A-, BAC clone
             BACR19N18, complete sequence
          Length = 196248

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 284   cagctcctccagccccagctcgcccc 309
             ||||||||||||| ||||||||||||
Sbjct: 66257 cagctcctccagcaccagctcgcccc 66282

>gb|AC007186.9|AC007186 Drosophila melanogaster, chromosome 2L, region 32A-, BAC clone
             BACR03D06, complete sequence
          Length = 176306

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 284   cagctcctccagccccagctcgcccc 309
             ||||||||||||| ||||||||||||
Sbjct: 20496 cagctcctccagcaccagctcgcccc 20471

>gb|AF121361.1|AF121361 Drosophila melanogaster signal transducting adaptor protein (STAM),
             serine threonine kinase Ial (IAL), and zinc finger protein
             (DNZ1) genes, complete cds
          Length = 16023

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 284   cagctcctccagccccagctcgcccc 309
             ||||||||||||| ||||||||||||
Sbjct: 15608 cagctcctccagcaccagctcgcccc 15633

>gb|AE003630.2| Drosophila melanogaster chromosome 2L, section 39 of 83 of the complete
             sequence
          Length = 289460

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 284   cagctcctccagccccagctcgcccc 309
             ||||||||||||| ||||||||||||
Sbjct: 83384 cagctcctccagcaccagctcgcccc 83359

>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 322     ccagcgcgtggccggcgccgt 342
               |||||||||||||||||||||
Sbjct: 2677007 ccagcgcgtggccggcgccgt 2677027

>dbj|AP006467.1| Megaptera novaeangliae mitochondrial DNA, complete genome
          Length = 16398

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    aatttgtatatgatgttataa 62
             |||||||||||||||||||||
Sbjct: 11876 aatttgtatatgatgttataa 11856

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    cgtggccggcgccgtccttc 347
              ||||||||||||||||||||
Sbjct: 830617 cgtggccggcgccgtccttc 830636

>emb|AJ278243.1|TAE278243 Triticum aestivum mRNA for triosephosphat-isomerase (tpis gene)
          Length = 762

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 183 acgaggaaaccatcgccgtcgggc 206
           ||||||||||||||| ||||||||
Sbjct: 695 acgaggaaaccatcgacgtcgggc 672

>gb|AC126177.8| Homo sapiens 12 BAC RP11-554D14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 131209

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 275   cctgatagccagctcctccagccc 298
             |||||| |||||||||||||||||
Sbjct: 28149 cctgatggccagctcctccagccc 28172

>gb|AC119914.10| Mus musculus chromosome 15, clone RP24-244H15, complete sequence
          Length = 213223

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   agccagctcctccagcccca 300
             ||||||||||||||||||||
Sbjct: 93333 agccagctcctccagcccca 93314

>gb|AC131299.11| Mus musculus chromosome 15, clone RP23-335O2, complete sequence
          Length = 215708

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    agccagctcctccagcccca 300
              ||||||||||||||||||||
Sbjct: 198676 agccagctcctccagcccca 198695

>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence
          Length = 412348

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 314    cgcagcttccagcgcgtggccggc 337
              |||||| |||||||||||||||||
Sbjct: 111090 cgcagcgtccagcgcgtggccggc 111113

>gb|AC132403.5| Mus musculus BAC clone RP23-406I13 from 1, complete sequence
          Length = 172850

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aatttgtatatgatgttata 61
             ||||||||||||||||||||
Sbjct: 68415 aatttgtatatgatgttata 68434

>gb|U75438.1|HSU75438 Halobacterium salinarium transducer HtD protein (HtD) gene, complete
            cds
          Length = 2500

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 368  cgacgtctcgacggccgtcg 387
            ||||||||||||||||||||
Sbjct: 1540 cgacgtctcgacggccgtcg 1559

>gb|AC167966.4| Culex pipiens quinquefasciatus, clone Culex pipiens
              quinquefasciatus-3940126D9, complete sequence
          Length = 125236

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    ctcctccagccccagctcgc 306
              ||||||||||||||||||||
Sbjct: 107594 ctcctccagccccagctcgc 107575

>dbj|D10769.1|PSEMFA Pseudomonas sp. gene for maltopentaose forming amylase, complete cds
          Length = 3496

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  gccggcgccgtccttcttca 351
            ||||||||||||||||||||
Sbjct: 2474 gccggcgccgtccttcttca 2455


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,775,125
Number of Sequences: 3902068
Number of extensions: 2775125
Number of successful extensions: 61234
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61083
Number of HSP's gapped (non-prelim): 151
length of query: 393
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 371
effective length of database: 17,147,199,772
effective search space: 6361611115412
effective search space used: 6361611115412
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)