ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet119d11 |
|---|---|
| Clone Library Name | barley_pub |
>PIP23_ORYSA (Q7XUA6) Probable aquaporin PIP2.3 (Plasma membrane intrinsic| protein 2.3) (OsPIP2.3) Length = 290 Score = 42.4 bits (98), Expect = 4e-04 Identities = 20/25 (80%), Positives = 22/25 (88%) Frame = -1 Query: 414 AAIAALYHQYVLRASATKFGSAASF 340 AAIAA YHQYVLRASA K GS++SF Sbjct: 264 AAIAAAYHQYVLRASAAKLGSSSSF 288
>PIP22_ORYSA (Q6K215) Probable aquaporin PIP2.2 (Plasma membrane intrinsic| protein 2.2) (OsPIP2.2) Length = 288 Score = 38.1 bits (87), Expect = 0.008 Identities = 19/24 (79%), Positives = 19/24 (79%) Frame = -1 Query: 414 AAIAALYHQYVLRASATKFGSAAS 343 AAIAA YHQYVLRASA K GS S Sbjct: 263 AAIAAAYHQYVLRASAAKLGSYRS 286
>PIP24_ARATH (Q9FF53) Probable aquaporin PIP2.4 (Plasma membrane intrinsic| protein 2.4) Length = 291 Score = 35.0 bits (79), Expect = 0.068 Identities = 18/28 (64%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Frame = -1 Query: 414 AAIAALYHQYVLRASATK-FGSAASFGS 334 AA AA YHQ++LRA+A K GS SFGS Sbjct: 259 AAAAAFYHQFILRAAAIKALGSFGSFGS 286
>PIP25_ORYSA (Q8GRI8) Aquaporin PIP2.5 (Plasma membrane intrinsic protein 2.5)| (OsPIP2.5) Length = 283 Score = 35.0 bits (79), Expect = 0.068 Identities = 18/24 (75%), Positives = 19/24 (79%) Frame = -1 Query: 414 AAIAALYHQYVLRASATKFGSAAS 343 AAIAALYHQ VLRASA +GS S Sbjct: 258 AAIAALYHQIVLRASARGYGSFRS 281
>PIP24_ORYSA (Q8GRT8) Aquaporin PIP2.4 (Plasma membrane intrinsic protein 2.4)| (OsPIP2.4) Length = 286 Score = 34.7 bits (78), Expect = 0.089 Identities = 17/24 (70%), Positives = 19/24 (79%) Frame = -1 Query: 414 AAIAALYHQYVLRASATKFGSAAS 343 AAIAALYHQ +LRASA +GS S Sbjct: 261 AAIAALYHQVILRASARGYGSFRS 284
>PIP26_ARATH (Q9ZV07) Probable aquaporin PIP2.6 (Plasma membrane intrinsic| protein 2e) (PIP2e) Length = 289 Score = 32.3 bits (72), Expect = 0.44 Identities = 17/25 (68%), Positives = 19/25 (76%), Gaps = 1/25 (4%) Frame = -1 Query: 414 AAIAALYHQYVLRASATK-FGSAAS 343 AAIAA YHQ+VLRA A K +GS S Sbjct: 258 AAIAAFYHQFVLRAGAMKAYGSVRS 282
>PIP22_ARATH (P43287) Aquaporin PIP2.2 (Plasma membrane intrinsic protein 2b)| (PIP2b) (TMP2b) Length = 285 Score = 32.3 bits (72), Expect = 0.44 Identities = 18/28 (64%), Positives = 21/28 (75%), Gaps = 4/28 (14%) Frame = -1 Query: 414 AAIAALYHQYVLRASATK----FGSAAS 343 AAIAA YHQ+VLRAS +K F SAA+ Sbjct: 257 AAIAAFYHQFVLRASGSKSLGSFRSAAN 284
>PIP21_ARATH (P43286) Aquaporin PIP2.1 (Plasma membrane intrinsic protein 2a)| (PIP2a) Length = 287 Score = 32.3 bits (72), Expect = 0.44 Identities = 18/28 (64%), Positives = 21/28 (75%), Gaps = 4/28 (14%) Frame = -1 Query: 414 AAIAALYHQYVLRASATK----FGSAAS 343 AAIAA YHQ+VLRAS +K F SAA+ Sbjct: 259 AAIAAFYHQFVLRASGSKSLGSFRSAAN 286
>PIP21_ORYSA (Q8H5N9) Probable aquaporin PIP2.1 (Plasma membrane intrinsic| protein 2a) (PIP2a) (OsPIP2.1) Length = 290 Score = 32.0 bits (71), Expect = 0.58 Identities = 14/18 (77%), Positives = 15/18 (83%) Frame = -1 Query: 414 AAIAALYHQYVLRASATK 361 AAIAA YHQY+LRA A K Sbjct: 264 AAIAAFYHQYILRAGAIK 281
>GLI1_MOUSE (P47806) Zinc finger protein GLI1 (Glioma-associated oncogene| homolog) Length = 1111 Score = 31.6 bits (70), Expect = 0.76 Identities = 33/124 (26%), Positives = 45/124 (36%), Gaps = 15/124 (12%) Frame = +1 Query: 43 AHKPNRTYTLHFKFPPKLPGCV-----------HDMTVHHPH-HS*TLHGSKH*LTKTHS 186 A NRT++ + KLPGC H TVH P H H L + Sbjct: 352 AKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLPRAQP 411 Query: 187 IGRENKQQARAASRGKQRRAQRPAESRDPNGGPSVLCHIYSSYASDHL---AAAEGGSRA 357 + ++ R G++ ES P P SS +SDH +AA S Sbjct: 412 LSTVEPKREREGGSGREESRLTVPESAMPQQSPGA----QSSCSSDHSPAGSAANTDSGV 467 Query: 358 ELGG 369 E+ G Sbjct: 468 EMAG 471
>PIP25_ARATH (Q9SV31) Probable aquaporin PIP2.5 (Plasma membrane intrinsic| protein 2d) (PIP2d) Length = 286 Score = 30.8 bits (68), Expect = 1.3 Identities = 14/18 (77%), Positives = 15/18 (83%) Frame = -1 Query: 414 AAIAALYHQYVLRASATK 361 AAIAA YHQ+VLRA A K Sbjct: 258 AAIAAFYHQFVLRAGAIK 275
>PIP23_ARATH (P30302) Aquaporin PIP2.3 (Plasma membrane intrinsic protein 2c)| (PIP2c) (TMP2C) (RD28-PIP) (Water stress-induced tonoplast intrinsic protein) (WSI-TIP) Length = 285 Score = 30.8 bits (68), Expect = 1.3 Identities = 17/28 (60%), Positives = 20/28 (71%), Gaps = 4/28 (14%) Frame = -1 Query: 414 AAIAALYHQYVLRASATK----FGSAAS 343 A IAA YHQ+VLRAS +K F SAA+ Sbjct: 257 ATIAAFYHQFVLRASGSKSLGSFRSAAN 284
>SUV92_MOUSE (Q9EQQ0) Histone-lysine N-methyltransferase, H3 lysine-9 specific 2| (EC 2.1.1.43) (Histone H3-K9 methyltransferase 2) (H3-K9-HMTase 2) (Suppressor of variegation 3-9 homolog 2) (Su(var)3-9 homolog 2) Length = 477 Score = 30.4 bits (67), Expect = 1.7 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 7/70 (10%) Frame = +3 Query: 207 ASAGGEPRKAEARAKTSRIQGPQRRPLCP-------LPYLQFIRLRPSSGCRRRQPSRTW 365 A+A + R +EA A+ R GP RP L R RPS+G RR R W Sbjct: 2 ATARAKARGSEAGARCHRAPGPPPRPKARRTARRRRAETLTARRSRPSAGERRAGSQRAW 61 Query: 366 WRWPSARTGG 395 P A G Sbjct: 62 SGAPRAAVFG 71
>MCR_HUMAN (P08235) Mineralocorticoid receptor (MR)| Length = 984 Score = 30.4 bits (67), Expect = 1.7 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = +2 Query: 260 NPGTPTEAPLSSAISTVHTPPTI*RLPKEAAEPNLVALALS 382 N G+P +PLSS S++ +PP+ + + PN V L S Sbjct: 256 NVGSPLSSPLSSMKSSISSPPSHCSVKSPVSSPNNVTLRSS 296
>MCR_AOTNA (Q3YC04) Mineralocorticoid receptor (MR)| Length = 984 Score = 30.4 bits (67), Expect = 1.7 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = +2 Query: 260 NPGTPTEAPLSSAISTVHTPPTI*RLPKEAAEPNLVALALS 382 N G+P +PLSS S++ +PP+ + + PN V L S Sbjct: 256 NVGSPLSSPLSSMKSSISSPPSHCSVKSPVSSPNNVTLRSS 296
>NRAM2_MOUSE (P49282) Natural resistance-associated macrophage protein 2 (NRAMP| 2) Length = 568 Score = 29.6 bits (65), Expect = 2.9 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 9/69 (13%) Frame = +1 Query: 49 KPNRTYTLHFKFPPKLPGCVHDM---------TVHHPHHS*TLHGSKH*LTKTHSIGREN 201 KP+++ L F P PGC V PH+ LH + L K+ + R N Sbjct: 230 KPSQSQVLRGMFVPSCPGCRTPQVEQAVGIVGAVIMPHNM-YLHSA---LVKSRQVNRAN 285 Query: 202 KQQARAASR 228 KQ+ R A++ Sbjct: 286 KQEVREANK 294
>PIP28_ARATH (Q9ZVX8) Probable aquaporin PIP2.8 (Plasma membrane intrinsic| protein 3b) (PIP3b) Length = 278 Score = 29.3 bits (64), Expect = 3.7 Identities = 16/27 (59%), Positives = 19/27 (70%) Frame = -1 Query: 414 AAIAALYHQYVLRASATKFGSAASFGS 334 A AA YHQY+LRA+A K + ASF S Sbjct: 250 ALAAAAYHQYILRAAAIK--ALASFRS 274
>PIP27_ARATH (P93004) Aquaporin PIP2.7 (Plasma membrane intrinsic protein 3)| (Salt stress-induced major intrinsic protein) Length = 280 Score = 29.3 bits (64), Expect = 3.7 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 Query: 414 AAIAALYHQYVLRASATK 361 A AA YHQY+LRASA K Sbjct: 252 ALAAAAYHQYILRASAIK 269
>MCR_MOUSE (Q8VII8) Mineralocorticoid receptor (MR)| Length = 978 Score = 29.3 bits (64), Expect = 3.7 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +2 Query: 260 NPGTPTEAPLSSAISTVHTPPTI*RLPKEAAEPNLVALALS 382 N G+P +PLSS S + +PP+ + + PN V L S Sbjct: 256 NVGSPLSSPLSSMKSPISSPPSHCSVKSPVSSPNNVPLRSS 296
>MCR_RAT (P22199) Mineralocorticoid receptor (MR)| Length = 981 Score = 29.3 bits (64), Expect = 3.7 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +2 Query: 260 NPGTPTEAPLSSAISTVHTPPTI*RLPKEAAEPNLVALALS 382 N G+P +PLSS S + +PP+ + + PN V L S Sbjct: 256 NVGSPLSSPLSSMKSPISSPPSHCSVKSPVSSPNNVPLRSS 296
>MCR_TUPGB (Q29131) Mineralocorticoid receptor (MR)| Length = 977 Score = 29.3 bits (64), Expect = 3.7 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +2 Query: 260 NPGTPTEAPLSSAISTVHTPPTI*RLPKEAAEPNLVAL 373 N G+P +PLSS S + +PP+ + + PN V L Sbjct: 256 NVGSPLSSPLSSMKSPISSPPSHCSVKSPVSSPNNVTL 293
>CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)| Length = 637 Score = 29.3 bits (64), Expect = 3.7 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Frame = +1 Query: 196 ENKQQARAASRGKQRRAQR----PAESRDPNGGPSVLCHIYSSYASDHLAAAEGGSRAE 360 E +QQA G + +++ P S D S + S+HLAA EGG R E Sbjct: 322 ETEQQAERQEPGPETQSEEEERPPDRSPDGEAAASTRAAQPEAELSNHLAAEEGGQRGE 380
>SNPH_HUMAN (O15079) Syntaphilin| Length = 538 Score = 29.3 bits (64), Expect = 3.7 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +1 Query: 169 LTKTHSIGRENKQQARAASRGKQRRAQRPAESRDPNGGPSV 291 LT+THS+ + +R S G +RR P RD G S+ Sbjct: 38 LTRTHSLMAMSLPGSRRTSAGSRRRTSPPVSVRDAYGTSSL 78
>PIP28_ORYSA (Q7Y1E6) Probable aquaporin PIP2.8 (Plasma membrane intrinsic| protein 2.8) (OsPIP2.8) Length = 280 Score = 28.9 bits (63), Expect = 4.9 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = -1 Query: 414 AAIAALYHQYVLRASATKFGSAASFGS 334 AA A +YH Y+LR +A K +++S+ S Sbjct: 251 AAAAMIYHHYILRGAAAKAFASSSYRS 277
>EGF_RAT (P07522) Pro-epidermal growth factor precursor (EGF) [Contains:| Epidermal growth factor] Length = 1133 Score = 28.9 bits (63), Expect = 4.9 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Frame = +1 Query: 190 GRENKQQARAASRGKQRRAQ--RPAESRDPNGGPSVLCHIYS 309 G EN+ QA + R KQRR Q RDPN S Y+ Sbjct: 306 GTENRAQASDSERCKQRRGQCLYSLSERDPNSDSSACAEGYT 347
>PIP1_ATRCA (P42767) Aquaporin PIP-type| Length = 282 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -1 Query: 414 AAIAALYHQYVLRASATK 361 A AA YHQYVLRA+A K Sbjct: 254 ALAAAAYHQYVLRAAAIK 271
>CAC1G_RAT (O54898) Voltage-dependent T-type calcium channel alpha-1G subunit| (Voltage-gated calcium channel alpha subunit Cav3.1) Length = 2254 Score = 28.5 bits (62), Expect = 6.4 Identities = 17/60 (28%), Positives = 25/60 (41%) Frame = +1 Query: 106 VHDMTVHHPHHS*TLHGSKH*LTKTHSIGRENKQQARAASRGKQRRAQRPAESRDPNGGP 285 VH + HH HH H H T + R + + + G +R P + P+GGP Sbjct: 491 VHHLVHHHHHH----HHHYHLGNGTLRVPRASPEIQDRDANGSRRLMLPPPSTPTPSGGP 546
>RL5_ANOGA (O44248) 60S ribosomal protein L5| Length = 327 Score = 28.5 bits (62), Expect = 6.4 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +3 Query: 315 RLRPSSGCRRRQPSRTWWRWPSARTGGTRRRWR 413 ++ PS RR+ R+ RWPS R+ RRR R Sbjct: 249 KIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSR 281
>MCR_SAISC (Q9N0W8) Mineralocorticoid receptor (MR)| Length = 982 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +2 Query: 260 NPGTPTEAPLSSAISTVHTPPTI*RLPKEAAEPNLV 367 N G+P +PLSS S++ +PP+ + + PN V Sbjct: 255 NVGSPLSSPLSSMKSSISSPPSHCSVKSPVSSPNNV 290
>GLI1_HUMAN (P08151) Zinc finger protein GLI1 (Glioma-associated oncogene)| (Oncogene GLI) Length = 1106 Score = 28.5 bits (62), Expect = 6.4 Identities = 35/125 (28%), Positives = 47/125 (37%), Gaps = 16/125 (12%) Frame = +1 Query: 43 AHKPNRTYTLHFKFPPKLPGCV-----------HDMTVHHPH-HS*TLHGSKH*LTKTHS 186 A NRT++ + KLPGC H TVH P H H L + S Sbjct: 349 AKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLPRAPS 408 Query: 187 IGR-ENKQQARAASRGKQRRAQRPAESRDPNGGPSVLCHIYSSYASDHL---AAAEGGSR 354 I E K++ ++ R P + P P SS +SDH +AA S Sbjct: 409 ISTVEPKREREGGPIREESRLTVPEGAMKPQPSPGA----QSSCSSDHSPAGSAANTDSG 464 Query: 355 AELGG 369 E+ G Sbjct: 465 VEMTG 469
>PG35_MYCTU (Q10873) Hypothetical PE-PGRS family protein PE_PGRS35| Length = 558 Score = 28.5 bits (62), Expect = 6.4 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = +1 Query: 253 PAESRDPNGGPSVLCHIYSSYASDHLAAAEGGSRAELGGAGPQHVLVVQGGDGG 414 P + PNGG L +Y + + + A A G GGAG L+ GG GG Sbjct: 127 PGTATSPNGGAGGL--LYGNGGNGYSATASGVG----GGAGGSAGLIGNGGAGG 174
>WA22_MYCTU (P0A686) WAG22 antigen precursor| Length = 914 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 340 EGGSRAELGGAGPQHVLVVQGGDGG 414 E G +GGAG VL+ GG+GG Sbjct: 452 ESGGTGGVGGAGGNAVLIGNGGEGG 476
>WA22_MYCBO (P0A687) WAG22 antigen precursor| Length = 914 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 340 EGGSRAELGGAGPQHVLVVQGGDGG 414 E G +GGAG VL+ GG+GG Sbjct: 452 ESGGTGGVGGAGGNAVLIGNGGEGG 476
>PIP26_ORYSA (Q7XLR1) Probable aquaporin PIP2.6 (Plasma membrane intrinsic| protein 2.6) (OsPIP2.6) Length = 282 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = -1 Query: 414 AAIAALYHQYVLRASATK 361 A AA YHQY+LRA+A K Sbjct: 254 ALAAAAYHQYILRAAAIK 271
>Y764_XANAC (Q8PPC2) UPF0102 protein XAC0764| Length = 122 Score = 28.1 bits (61), Expect = 8.3 Identities = 18/40 (45%), Positives = 22/40 (55%) Frame = -3 Query: 322 RRRMNCRYGRGQRGLRWGPWILLVFARASAFLGSPPALAA 203 R R + R+G G + W LV A A FLG+ PALAA Sbjct: 55 RYRRDDRFGGGAASVDWRKRRKLVLA-AQLFLGAHPALAA 93
>STE20_YEAST (Q03497) Serine/threonine-protein kinase STE20 (EC 2.7.11.1)| Length = 939 Score = 28.1 bits (61), Expect = 8.3 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +2 Query: 263 PGTPTEAPLSSAISTVHTPPTI*RLPKEAAE 355 P PT++ S IST HTP + + PK A+ Sbjct: 538 PIPPTKSKTSPIISTAHTPQQVAQSPKAPAQ 568
>SPEE_BACSU (P70998) Spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 276 Score = 28.1 bits (61), Expect = 8.3 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +1 Query: 376 PQHVLVVQGGDGG 414 P+HVLVV GGDGG Sbjct: 77 PEHVLVVGGGDGG 89
>IRS1_HUMAN (P35568) Insulin receptor substrate 1 (IRS-1)| Length = 1242 Score = 28.1 bits (61), Expect = 8.3 Identities = 29/77 (37%), Positives = 34/77 (44%), Gaps = 12/77 (15%) Frame = +3 Query: 204 AASAGGEPRKAEARAKTSRIQGPQ---------RRPLCPL--PYLQFIRLRPSSGCRRRQ 350 +AS G AE A +S + GPQ R L P + IR P GCRRR Sbjct: 1041 SASPTGPQGAAELAAHSSLLGGPQGPGGMSAFTRVNLSPNRNQSAKVIRADPQ-GCRRRH 1099 Query: 351 PSRTWWRWPSA-RTGGT 398 S T+ PSA R G T Sbjct: 1100 SSETFSSTPSATRVGNT 1116
>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID| domain-containing protein 1B) (Osa homolog 2) (hOsa2) (p250R) (BRG1-binding protein hELD/OSA1) (BRG1-associated factor 250b) (BAF250B) Length = 2236 Score = 28.1 bits (61), Expect = 8.3 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 5/58 (8%) Frame = +1 Query: 124 HHPHHS*TLHGSKH*LTKTHSIGR-----ENKQQARAASRGKQRRAQRPAESRDPNGG 282 HH HH+ H H L H++ + + +QQ + + +Q++ Q P + + GG Sbjct: 85 HHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGG 142
>Y4GI_RHISN (P55465) Hypothetical protein y4gI| Length = 909 Score = 28.1 bits (61), Expect = 8.3 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +3 Query: 195 RKQAASAGGEPRKAEARAKTSRIQGPQRRPLCPLP-YLQFIRLRPSSGCRRRQPSRT 362 R + A A E RKAE ++Q +RRPL L L F LR ++ PSRT Sbjct: 252 RLELAEATIEERKAETVLVQQKLQEARRRPLKQLKRKLVFNMLRAAAKASPPLPSRT 308 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,141,532 Number of Sequences: 219361 Number of extensions: 1267067 Number of successful extensions: 4034 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 3818 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4029 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
