ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet119c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
2dbj|AK104872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
3dbj|AK070465.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 115 1e-22
5emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268... 115 1e-22
6ref|NM_184962.1| Oryza sativa (japonica cultivar-group), mRNA 60 6e-06
7gb|AC079736.13| Oryza sativa (japonica cultivar-group) chromosom... 60 6e-06
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 60 6e-06
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
10dbj|AK104713.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
11dbj|AK070543.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
12dbj|AK069994.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
13dbj|AK061393.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
14dbj|AK060746.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
15gb|AY524972.1| Oryza sativa (indica cultivar-group) benzothiadia... 52 0.002
16ref|NM_069410.3| Caenorhabditis elegans F44D12.5 (F44D12.5) mRNA... 46 0.093
17ref|NM_069412.1| Caenorhabditis elegans F44D12.7 (F44D12.7) mRNA... 46 0.093
18ref|NM_069407.2| Caenorhabditis elegans F44D12.3 (F44D12.3) mRNA... 46 0.093
19emb|Z68298.1|CEF44D12 Caenorhabditis elegans Cosmid F44D12, comp... 46 0.093
20emb|AL731559.8| Human DNA sequence from clone RP11-495F22 on chr... 44 0.37
21gb|AC146330.33| Medicago truncatula clone mth2-7g7, complete seq... 42 1.5
22emb|AL354706.11| Human DNA sequence from clone RP11-229I7 on chr... 42 1.5
23gb|AC157553.10| Mus musculus chromosome 7, clone RP24-68L4, comp... 42 1.5
24gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Can... 42 1.5
25gb|AC090116.15| Homo sapiens 12q BAC RP11-578B16 (Roswell Park C... 42 1.5
26emb|AL954648.7| Zebrafish DNA sequence from clone CH211-245P24, ... 42 1.5
27emb|AL672033.12| Mouse DNA sequence from clone RP23-436F2 on chr... 42 1.5
28gb|AC164437.2| Mus musculus BAC clone RP23-105B9 from chromosome... 40 5.7
29emb|AL445986.14| Human DNA sequence from clone RP11-310F24 on ch... 40 5.7
30gb|AC068953.9| Homo sapiens chromosome 8, clone CTD1-2019D9, com... 40 5.7
31gb|AC011586.9| Homo sapiens, clone RP11-13N12, complete sequence 40 5.7
32emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 40 5.7
33dbj|AP003468.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 5.7 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  115 bits (58), Expect = 1e-22
 Identities = 112/130 (86%)
 Strand = Plus / Plus

                                                                            
Query: 259      ttcaggccacaaaatcatgcagaagaggcgattgctcgaagcgttgtcgttgatccatct 318
                |||||||||||||||||||||||||||| || ||||| || ||||| |||||||||||||
Sbjct: 27308142 ttcaggccacaaaatcatgcagaagaggtgaatgctcaaaccgttgccgttgatccatct 27308201

                                                                            
Query: 319      ggttcaaagattcgtagtcggaagatgcgatgccgacaccgagaggagcaccggcattgt 378
                | ||||  || || ||||| |||||||||| |  |||||| |||||||||   |||||||
Sbjct: 27308202 gattcatcgaatcatagtccgaagatgcgacggtgacaccaagaggagcagtagcattgt 27308261

                          
Query: 379      agatgtcatc 388
                ||||||||||
Sbjct: 27308262 agatgtcatc 27308271



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 122/143 (85%), Gaps = 9/143 (6%)
 Strand = Plus / Plus

                                                                            
Query: 64       tatcacccccaccacctaagctttatattacatttcctgctataccccatgctctcctgt 123
                |||||||||||||| |||| ||| |||||||||||||||||||||| |   |||| ||||
Sbjct: 27307956 tatcacccccaccatctaacctt-atattacatttcctgctatacctc---ctcttctgt 27308011

                                                                            
Query: 124      atcaaatggcaactacaaagctacaccccccatgctcttgcaggcatgctattattctgc 183
                || ||||||||||||||||||||||   ||||||| ||| ||||||||   ||||||| |
Sbjct: 27308012 attaaatggcaactacaaagctacaaatcccatgccctttcaggcatg---ttattctcc 27308068

                                       
Query: 184      cactaggagttttacaaatgctg 206
                ||||||  || ||||||||||||
Sbjct: 27308069 cactag--gtgttacaaatgctg 27308089
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>dbj|AK104872.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-C01, full
            insert sequence
          Length = 1896

 Score =  115 bits (58), Expect = 1e-22
 Identities = 112/130 (86%)
 Strand = Plus / Minus

                                                                        
Query: 259  ttcaggccacaaaatcatgcagaagaggcgattgctcgaagcgttgtcgttgatccatct 318
            |||||||||||||||||||||||||||| || ||||| || ||||| |||||||||||||
Sbjct: 1640 ttcaggccacaaaatcatgcagaagaggtgaatgctcaaaccgttgccgttgatccatct 1581

                                                                        
Query: 319  ggttcaaagattcgtagtcggaagatgcgatgccgacaccgagaggagcaccggcattgt 378
            | ||||  || || ||||| |||||||||| |  |||||| |||||||||   |||||||
Sbjct: 1580 gattcatcgaatcatagtccgaagatgcgacggtgacaccaagaggagcagtagcattgt 1521

                      
Query: 379  agatgtcatc 388
            ||||||||||
Sbjct: 1520 agatgtcatc 1511



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 122/143 (85%), Gaps = 9/143 (6%)
 Strand = Plus / Minus

                                                                        
Query: 64   tatcacccccaccacctaagctttatattacatttcctgctataccccatgctctcctgt 123
            |||||||||||||| |||| ||| |||||||||||||||||||||| |   |||| ||||
Sbjct: 1826 tatcacccccaccatctaacctt-atattacatttcctgctatacctc---ctcttctgt 1771

                                                                        
Query: 124  atcaaatggcaactacaaagctacaccccccatgctcttgcaggcatgctattattctgc 183
            || ||||||||||||||||||||||   ||||||| ||| ||||||||   ||||||| |
Sbjct: 1770 attaaatggcaactacaaagctacaaatcccatgccctttcaggcatg---ttattctcc 1714

                                   
Query: 184  cactaggagttttacaaatgctg 206
            ||||||  || ||||||||||||
Sbjct: 1713 cactag--gtgttacaaatgctg 1693
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>dbj|AK070465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054P21, full
            insert sequence
          Length = 3030

 Score =  115 bits (58), Expect = 1e-22
 Identities = 112/130 (86%)
 Strand = Plus / Minus

                                                                        
Query: 259  ttcaggccacaaaatcatgcagaagaggcgattgctcgaagcgttgtcgttgatccatct 318
            |||||||||||||||||||||||||||| || ||||| || ||||| |||||||||||||
Sbjct: 2733 ttcaggccacaaaatcatgcagaagaggtgaatgctcaaaccgttgccgttgatccatct 2674

                                                                        
Query: 319  ggttcaaagattcgtagtcggaagatgcgatgccgacaccgagaggagcaccggcattgt 378
            | ||||  || || ||||| |||||||||| |  |||||| |||||||||   |||||||
Sbjct: 2673 gattcatcgaatcatagtccgaagatgcgacggtgacaccaagaggagcagtagcattgt 2614

                      
Query: 379  agatgtcatc 388
            ||||||||||
Sbjct: 2613 agatgtcatc 2604



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 122/143 (85%), Gaps = 9/143 (6%)
 Strand = Plus / Minus

                                                                        
Query: 64   tatcacccccaccacctaagctttatattacatttcctgctataccccatgctctcctgt 123
            |||||||||||||| |||| ||| |||||||||||||||||||||| |   |||| ||||
Sbjct: 2919 tatcacccccaccatctaacctt-atattacatttcctgctatacctc---ctcttctgt 2864

                                                                        
Query: 124  atcaaatggcaactacaaagctacaccccccatgctcttgcaggcatgctattattctgc 183
            || ||||||||||||||||||||||   ||||||| ||| ||||||||   ||||||| |
Sbjct: 2863 attaaatggcaactacaaagctacaaatcccatgccctttcaggcatg---ttattctcc 2807

                                   
Query: 184  cactaggagttttacaaatgctg 206
            ||||||  || ||||||||||||
Sbjct: 2806 cactag--gtgttacaaatgctg 2786
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  115 bits (58), Expect = 1e-22
 Identities = 112/130 (86%)
 Strand = Plus / Plus

                                                                            
Query: 259      ttcaggccacaaaatcatgcagaagaggcgattgctcgaagcgttgtcgttgatccatct 318
                |||||||||||||||||||||||||||| || ||||| || ||||| |||||||||||||
Sbjct: 27233742 ttcaggccacaaaatcatgcagaagaggtgaatgctcaaaccgttgccgttgatccatct 27233801

                                                                            
Query: 319      ggttcaaagattcgtagtcggaagatgcgatgccgacaccgagaggagcaccggcattgt 378
                | ||||  || || ||||| |||||||||| |  |||||| |||||||||   |||||||
Sbjct: 27233802 gattcatcgaatcatagtccgaagatgcgacggtgacaccaagaggagcagtagcattgt 27233861

                          
Query: 379      agatgtcatc 388
                ||||||||||
Sbjct: 27233862 agatgtcatc 27233871



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 122/143 (85%), Gaps = 9/143 (6%)
 Strand = Plus / Plus

                                                                            
Query: 64       tatcacccccaccacctaagctttatattacatttcctgctataccccatgctctcctgt 123
                |||||||||||||| |||| ||| |||||||||||||||||||||| |   |||| ||||
Sbjct: 27233556 tatcacccccaccatctaacctt-atattacatttcctgctatacctc---ctcttctgt 27233611

                                                                            
Query: 124      atcaaatggcaactacaaagctacaccccccatgctcttgcaggcatgctattattctgc 183
                || ||||||||||||||||||||||   ||||||| ||| ||||||||   ||||||| |
Sbjct: 27233612 attaaatggcaactacaaagctacaaatcccatgccctttcaggcatg---ttattctcc 27233668

                                       
Query: 184      cactaggagttttacaaatgctg 206
                ||||||  || ||||||||||||
Sbjct: 27233669 cactag--gtgttacaaatgctg 27233689
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>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 146585

 Score =  115 bits (58), Expect = 1e-22
 Identities = 112/130 (86%)
 Strand = Plus / Plus

                                                                          
Query: 259    ttcaggccacaaaatcatgcagaagaggcgattgctcgaagcgttgtcgttgatccatct 318
              |||||||||||||||||||||||||||| || ||||| || ||||| |||||||||||||
Sbjct: 121174 ttcaggccacaaaatcatgcagaagaggtgaatgctcaaaccgttgccgttgatccatct 121233

                                                                          
Query: 319    ggttcaaagattcgtagtcggaagatgcgatgccgacaccgagaggagcaccggcattgt 378
              | ||||  || || ||||| |||||||||| |  |||||| |||||||||   |||||||
Sbjct: 121234 gattcatcgaatcatagtccgaagatgcgacggtgacaccaagaggagcagtagcattgt 121293

                        
Query: 379    agatgtcatc 388
              ||||||||||
Sbjct: 121294 agatgtcatc 121303



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 122/143 (85%), Gaps = 9/143 (6%)
 Strand = Plus / Plus

                                                                          
Query: 64     tatcacccccaccacctaagctttatattacatttcctgctataccccatgctctcctgt 123
              |||||||||||||| |||| ||| |||||||||||||||||||||| |   |||| ||||
Sbjct: 120988 tatcacccccaccatctaacctt-atattacatttcctgctatacctc---ctcttctgt 121043

                                                                          
Query: 124    atcaaatggcaactacaaagctacaccccccatgctcttgcaggcatgctattattctgc 183
              || ||||||||||||||||||||||   ||||||| ||| ||||||||   ||||||| |
Sbjct: 121044 attaaatggcaactacaaagctacaaatcccatgccctttcaggcatg---ttattctcc 121100

                                     
Query: 184    cactaggagttttacaaatgctg 206
              ||||||  || ||||||||||||
Sbjct: 121101 cactag--gtgttacaaatgctg 121121
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>ref|NM_184962.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2248

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                        
Query: 262  aggccacaaaatcatgcagaagaggcgattgctcgaagcgttgtcgttgatccatctggt 321
            ||||||||||||||||||  ||||||||| | ||||| ||||| | |||||| || ||||
Sbjct: 1927 aggccacaaaatcatgcattagaggcgatggttcgaaccgttgcctttgatctatttggt 1868

                                  
Query: 322  tcaaagattcgtagtcggaaga 343
            ||   ||||||||||| |||||
Sbjct: 1867 tcgtggattcgtagtccgaaga 1846



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 86   ttatattacatttcctgctatacccc 111
            |||||||||||||| |||||||||||
Sbjct: 2088 ttatattacatttcatgctatacccc 2063
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>gb|AC079736.13| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0003G23, complete sequence
          Length = 135931

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                         
Query: 262   aggccacaaaatcatgcagaagaggcgattgctcgaagcgttgtcgttgatccatctggt 321
             ||||||||||||||||||  ||||||||| | ||||| ||||| | |||||| || ||||
Sbjct: 67656 aggccacaaaatcatgcattagaggcgatggttcgaaccgttgcctttgatctatttggt 67597

                                   
Query: 322   tcaaagattcgtagtcggaaga 343
             ||   ||||||||||| |||||
Sbjct: 67596 tcgtggattcgtagtccgaaga 67575



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 86    ttatattacatttcctgctatacccc 111
             |||||||||||||| |||||||||||
Sbjct: 67817 ttatattacatttcatgctatacccc 67792
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                            
Query: 262      aggccacaaaatcatgcagaagaggcgattgctcgaagcgttgtcgttgatccatctggt 321
                ||||||||||||||||||  ||||||||| | ||||| ||||| | |||||| || ||||
Sbjct: 26766556 aggccacaaaatcatgcattagaggcgatggttcgaaccgttgcctttgatctatttggt 26766615

                                      
Query: 322      tcaaagattcgtagtcggaaga 343
                ||   ||||||||||| |||||
Sbjct: 26766616 tcgtggattcgtagtccgaaga 26766637



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 86       ttatattacatttcctgctatacccc 111
                |||||||||||||| |||||||||||
Sbjct: 26766395 ttatattacatttcatgctatacccc 26766420
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                            
Query: 262      aggccacaaaatcatgcagaagaggcgattgctcgaagcgttgtcgttgatccatctggt 321
                ||||||||||||||||||  ||||||||| | ||||| ||||| | |||||| || ||||
Sbjct: 26857879 aggccacaaaatcatgcattagaggcgatggttcgaaccgttgcctttgatctatttggt 26857938

                                      
Query: 322      tcaaagattcgtagtcggaaga 343
                ||   ||||||||||| |||||
Sbjct: 26857939 tcgtggattcgtagtccgaaga 26857960



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 86       ttatattacatttcctgctatacccc 111
                |||||||||||||| |||||||||||
Sbjct: 26857718 ttatattacatttcatgctatacccc 26857743
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>dbj|AK104713.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H09, full
           insert sequence
          Length = 1089

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                       
Query: 262 aggccacaaaatcatgcagaagaggcgattgctcgaagcgttgtcgttgatccatctggt 321
           ||||||||||||||||||  ||||||||| | ||||| ||||| | |||||| || ||||
Sbjct: 794 aggccacaaaatcatgcattagaggcgatggttcgaaccgttgcctttgatctatttggt 735

                                 
Query: 322 tcaaagattcgtagtcggaaga 343
           ||   ||||||||||| |||||
Sbjct: 734 tcgtggattcgtagtccgaaga 713



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 86  ttatattacatttcctgctatacccc 111
           |||||||||||||| |||||||||||
Sbjct: 955 ttatattacatttcatgctatacccc 930
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>dbj|AK070543.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023057H24, full
            insert sequence
          Length = 2952

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                        
Query: 262  aggccacaaaatcatgcagaagaggcgattgctcgaagcgttgtcgttgatccatctggt 321
            ||||||||||||||||||  ||||||||| | ||||| ||||| | |||||| || ||||
Sbjct: 2631 aggccacaaaatcatgcattagaggcgatggttcgaaccgttgcctttgatctatttggt 2572

                                  
Query: 322  tcaaagattcgtagtcggaaga 343
            ||   ||||||||||| |||||
Sbjct: 2571 tcgtggattcgtagtccgaaga 2550



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 86   ttatattacatttcctgctatacccc 111
            |||||||||||||| |||||||||||
Sbjct: 2792 ttatattacatttcatgctatacccc 2767
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>dbj|AK069994.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038C04, full
            insert sequence
          Length = 2630

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                        
Query: 262  aggccacaaaatcatgcagaagaggcgattgctcgaagcgttgtcgttgatccatctggt 321
            ||||||||||||||||||  ||||||||| | ||||| ||||| | |||||| || ||||
Sbjct: 2309 aggccacaaaatcatgcattagaggcgatggttcgaaccgttgcctttgatctatttggt 2250

                                  
Query: 322  tcaaagattcgtagtcggaaga 343
            ||   ||||||||||| |||||
Sbjct: 2249 tcgtggattcgtagtccgaaga 2228



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 86   ttatattacatttcctgctatacccc 111
            |||||||||||||| |||||||||||
Sbjct: 2470 ttatattacatttcatgctatacccc 2445
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>dbj|AK061393.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-D05, full
           insert sequence
          Length = 1089

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                       
Query: 262 aggccacaaaatcatgcagaagaggcgattgctcgaagcgttgtcgttgatccatctggt 321
           ||||||||||||||||||  ||||||||| | ||||| ||||| | |||||| || ||||
Sbjct: 794 aggccacaaaatcatgcattagaggcgatggttcgaaccgttgcctttgatctatttggt 735

                                 
Query: 322 tcaaagattcgtagtcggaaga 343
           ||   ||||||||||| |||||
Sbjct: 734 tcgtggattcgtagtccgaaga 713



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 86  ttatattacatttcctgctatacccc 111
           |||||||||||||| |||||||||||
Sbjct: 955 ttatattacatttcatgctatacccc 930
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>dbj|AK060746.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-E12, full
            insert sequence
          Length = 1711

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                        
Query: 262  aggccacaaaatcatgcagaagaggcgattgctcgaagcgttgtcgttgatccatctggt 321
            ||||||||||||||||||  ||||||||| | ||||| ||||| | |||||| || ||||
Sbjct: 1453 aggccacaaaatcatgcattagaggcgatggttcgaaccgttgcctttgatctatttggt 1394

                                  
Query: 322  tcaaagattcgtagtcggaaga 343
            ||   ||||||||||| |||||
Sbjct: 1393 tcgtggattcgtagtccgaaga 1372



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 86   ttatattacatttcctgctatacccc 111
            |||||||||||||| |||||||||||
Sbjct: 1613 ttatattacatttcatgctatacccc 1588
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>gb|AY524972.1| Oryza sativa (indica cultivar-group) benzothiadiazole-induced
            homeodomain protein 1 (BIHD1) mRNA, complete cds
          Length = 2523

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                        
Query: 262  aggccacaaaatcatgcagaagaggcgattgctcgaagcgttgtcgttgatccatctggt 321
            ||||||||||||||||||  ||||||||  | ||||| ||||| | |||||| || ||||
Sbjct: 2183 aggccacaaaatcatgcattagaggcgacggttcgaaccgttgcctttgatctatttggt 2124

                                  
Query: 322  tcaaagattcgtagtcggaaga 343
            ||   ||||||||||| |||||
Sbjct: 2123 tcgtggattcgtagtccgaaga 2102



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 86   ttatattacatttcctgctatacccc 111
            |||||||||||||| |||||||||||
Sbjct: 2344 ttatattacatttcatgctatacccc 2319
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>ref|NM_069410.3| Caenorhabditis elegans F44D12.5 (F44D12.5) mRNA, complete cds
          Length = 421

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 305 tcgttgatccatctggttcaaag 327
           |||||||||||||||||||||||
Sbjct: 157 tcgttgatccatctggttcaaag 179
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>ref|NM_069412.1| Caenorhabditis elegans F44D12.7 (F44D12.7) mRNA, complete cds
          Length = 330

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 305 tcgttgatccatctggttcaaag 327
           |||||||||||||||||||||||
Sbjct: 152 tcgttgatccatctggttcaaag 174
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>ref|NM_069407.2| Caenorhabditis elegans F44D12.3 (F44D12.3) mRNA, complete cds
          Length = 411

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 305 tcgttgatccatctggttcaaag 327
           |||||||||||||||||||||||
Sbjct: 156 tcgttgatccatctggttcaaag 178
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>emb|Z68298.1|CEF44D12 Caenorhabditis elegans Cosmid F44D12, complete sequence
          Length = 31853

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 305   tcgttgatccatctggttcaaag 327
             |||||||||||||||||||||||
Sbjct: 29100 tcgttgatccatctggttcaaag 29122



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 305   tcgttgatccatctggttcaaag 327
             |||||||||||||||||||||||
Sbjct: 22545 tcgttgatccatctggttcaaag 22567



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 305   tcgttgatccatctggttcaaag 327
             |||||||||||||||||||||||
Sbjct: 15838 tcgttgatccatctggttcaaag 15816
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>emb|AL731559.8| Human DNA sequence from clone RP11-495F22 on chromosome 10 Contains part
              of the gene for CamKI-like protein kinase (CKLiK)
              (LOC221042 LOC283070), complete sequence
          Length = 196320

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 104    tataccccatgctctcctgtatcaaatggcaact 137
              ||||||||| |||||||||||| |||| ||||||
Sbjct: 117535 tataccccaagctctcctgtataaaatagcaact 117568
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>gb|AC146330.33| Medicago truncatula clone mth2-7g7, complete sequence
          Length = 117139

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    agtaaattgcattttatcttt 36
             |||||||||||||||||||||
Sbjct: 84694 agtaaattgcattttatcttt 84674
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>emb|AL354706.11| Human DNA sequence from clone RP11-229I7 on chromosome 13, complete
             sequence
          Length = 96045

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    ttttatctttacaaaagattt 47
             |||||||||||||||||||||
Sbjct: 17733 ttttatctttacaaaagattt 17753
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>gb|AC157553.10| Mus musculus chromosome 7, clone RP24-68L4, complete sequence
          Length = 184205

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 76    cacctaagctttatattacat 96
             |||||||||||||||||||||
Sbjct: 94154 cacctaagctttatattacat 94134
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>gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 125400

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 30     tatctttacaaaagatttccatctt 54
              ||||||| |||||||||||||||||
Sbjct: 108943 tatctttccaaaagatttccatctt 108967
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>gb|AC090116.15| Homo sapiens 12q BAC RP11-578B16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 162004

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 256   tcattcaggccacaaaatcat 276
             |||||||||||||||||||||
Sbjct: 83784 tcattcaggccacaaaatcat 83764
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>emb|AL954648.7| Zebrafish DNA sequence from clone CH211-245P24, complete sequence
          Length = 167007

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 266    cacaaaatcatgcagaagagg 286
              |||||||||||||||||||||
Sbjct: 100911 cacaaaatcatgcagaagagg 100931
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>emb|AL672033.12| Mouse DNA sequence from clone RP23-436F2 on chromosome X, complete
            sequence
          Length = 181933

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 76   cacctaagctttatattacat 96
            |||||||||||||||||||||
Sbjct: 2837 cacctaagctttatattacat 2817
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>gb|AC164437.2| Mus musculus BAC clone RP23-105B9 from chromosome 14, complete sequence
          Length = 205044

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   gctgtcacccccaaccccaa 222
             ||||||||||||||||||||
Sbjct: 51865 gctgtcacccccaaccccaa 51846
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>emb|AL445986.14| Human DNA sequence from clone RP11-310F24 on chromosome 9 Contains a
             CpG island, complete sequence
          Length = 120873

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   ctgtcacccccaaccccaat 223
             ||||||||||||||||||||
Sbjct: 11665 ctgtcacccccaaccccaat 11646
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>gb|AC068953.9| Homo sapiens chromosome 8, clone CTD1-2019D9, complete sequence
          Length = 176997

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     attgcattttatctttacaa 40
              ||||||||||||||||||||
Sbjct: 118410 attgcattttatctttacaa 118391
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>gb|AC011586.9| Homo sapiens, clone RP11-13N12, complete sequence
          Length = 167475

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 14    atagtaaattgcattttatcttta 37
             ||||||||||||||||||| ||||
Sbjct: 81482 atagtaaattgcattttattttta 81505
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>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia
          Length = 1923819

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     tacaaaagatttccatcttt 55
              ||||||||||||||||||||
Sbjct: 487193 tacaaaagatttccatcttt 487174
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>dbj|AP003468.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1205B2, complete
             sequence
          Length = 177515

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    attgcattttatctttacaa 40
             ||||||||||||||||||||
Sbjct: 84687 attgcattttatctttacaa 84706


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,686,987
Number of Sequences: 3902068
Number of extensions: 3686987
Number of successful extensions: 72949
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72787
Number of HSP's gapped (non-prelim): 152
length of query: 428
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 406
effective length of database: 17,147,199,772
effective search space: 6961763107432
effective search space used: 6961763107432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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