>PK2L2_HUMAN (Q9NZM6) Polycystic kidney disease 2-like 2 protein (Polycystin-L2)|
          Length = 624

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -3

Query: 322 YWRSQIISFLTVGLDSS*QVPDFFFLLCYHRV*NYLVAVDI 200
           Y+  QI   L   L S+ +  DF+FL C+H   N ++A+ I
Sbjct: 336 YYNVQIFLLLGQLLKSTEKYSDFYFLACWHIYYNNIIAITI 376

>DYHC_ASHGO (Q9C1M7) Dynein heavy chain, cytosolic (DYHC)|
          Length = 4083

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = +2

Query: 107  QTENSHIQNFFSLLEKGIILRQLQTSAFHNQYIYSYKIVSHTVVTEKE 250
            + EN  +QN   L+  G ++++LQTS   ++  YS K++    +T+ E
Sbjct: 3229 KVENEMLQNKARLMAAGEMIKELQTSIESSKVSYS-KLIREVEITKTE 3275

>PK2L2_MOUSE (Q9JLG4) Polycystic kidney disease 2-like 2 protein (Polycystin-L2)|
          Length = 621

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = -3

Query: 325 FYWRSQIISFLTVG--LDSS*QVPDFFFLLCYHRV*NYLVAVDI 200
           FY    + SFL +G  L ++   PDF+FL  +H   N ++A+ I
Sbjct: 333 FYAYCNMQSFLLLGQLLKNTDSYPDFYFLAYWHIYYNNVIAITI 376

>PMA1_AJECA (Q07421) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)|
          Length = 916

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 5   RTHPIFCLQATQTQAWLLFL 64
           RTHP+  L+ + T+ WL+F+
Sbjct: 788 RTHPVLFLEISLTENWLIFI 807

>G6PI_MYCGE (P47357) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)|
           (Phosphoglucose isomerase) (PGI) (Phosphohexose
           isomerase) (PHI)
          Length = 431

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 167 RQLQTSAFHNQYIYSYKIVSHTVVTEKEKKI 259
           + LQT++  N   Y Y +V H + T K+ KI
Sbjct: 231 KDLQTTSLENNSAYLYAVVRHWLYTTKKFKI 261

>SFSA_BACHD (Q9KE16) Sugar fermentation stimulation protein homolog|
          Length = 243

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 20/81 (24%)
 Frame = +1

Query: 97  VELPNRKLSYSELFFLAGEGDHLASI--------------ANFSLP*SIYLQLQDSFTHG 234
           V+ P+RK  +S +   A EGD L S+                  LP   +  ++  FT+G
Sbjct: 58  VDNPSRKTQWSVVCSQAPEGDVLVSLDTTLPNQLVTKALQQQEFLPLCQWAYVRQEFTYG 117

Query: 235 GN------REGKKNPALAMKS 279
           G+      REG+K   L +KS
Sbjct: 118 GSRWDVLLREGEKQLLLEIKS 138

>POL1_TRSVB (Q88893) RNA1 polyprotein (P1) [Contains: P1A protein (1A)|
           (Protease cofactor); Putative ATP-dependent helicase (EC
           3.6.1.-) (NTP-binding protein) (NTB) (1B)
           (Membrane-binding protein); Viral genome-linked protein
           (1C-VPg); Picornain 3C-like p
          Length = 2304

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 96  YLKSTCITYWGKNKSQACV 40
           Y K++C  YW + + QACV
Sbjct: 842 YTKNSCDKYWSRYRRQACV 860

>ALP1_SCHPO (Q10197) Tubulin-folding cofactor D (Altered polarity protein 1)|
          Length = 1121

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +1

Query: 94   IVELPNRKLS--YSELFFLA-GEGDHLASIANFSLP*SIYLQLQDSFTHGGNREGKKN 258
            ++E+PN +L   Y    F A G G  LA +  F    S   QL+DSF    +R GK++
Sbjct: 888  LLEIPNLRLQAFYGITVFTADGFGSDLA-VKCFEFYLSYVYQLEDSFKKSNSRYGKRD 944


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,342,061
Number of Sequences: 219361
Number of extensions: 1039329
Number of successful extensions: 2188
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2187
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)