>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  113 bits (57), Expect = 5e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                           
Query: 291     agggcagaagggcgtgccgggcttctccctgtggctggggatgacgaagcgccggatcct 350
               ||||||||| |||||||||  ||| || | ||||||||||||||||||||| ||||| | 
Sbjct: 5454826 agggcagaacggcgtgccgtccttgtcgcggtggctggggatgacgaagcggcggatgcg 5454885

                                                                        
Query: 351     gccgacctgctcggcgaggtaagcgtcgcagaggaacgccttggagaagctgtcctc 407
                || ||||||||| |||||||  |||||||||||||||||||||||||| |||||||
Sbjct: 5454886 ccccacctgctcgacgaggtagccgtcgcagaggaacgccttggagaaggtgtcctc 5454942

>dbj|AK069867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038F14, full
            insert sequence
          Length = 1521

 Score =  113 bits (57), Expect = 5e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                        
Query: 291  agggcagaagggcgtgccgggcttctccctgtggctggggatgacgaagcgccggatcct 350
            ||||||||| |||||||||  ||| || | ||||||||||||||||||||| ||||| | 
Sbjct: 1003 agggcagaacggcgtgccgtccttgtcgcggtggctggggatgacgaagcggcggatgcg 944

                                                                     
Query: 351  gccgacctgctcggcgaggtaagcgtcgcagaggaacgccttggagaagctgtcctc 407
             || ||||||||| |||||||  |||||||||||||||||||||||||| |||||||
Sbjct: 943  ccccacctgctcgacgaggtagccgtcgcagaggaacgccttggagaaggtgtcctc 887

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  113 bits (57), Expect = 5e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                           
Query: 291     agggcagaagggcgtgccgggcttctccctgtggctggggatgacgaagcgccggatcct 350
               ||||||||| |||||||||  ||| || | ||||||||||||||||||||| ||||| | 
Sbjct: 5454815 agggcagaacggcgtgccgtccttgtcgcggtggctggggatgacgaagcggcggatgcg 5454874

                                                                        
Query: 351     gccgacctgctcggcgaggtaagcgtcgcagaggaacgccttggagaagctgtcctc 407
                || ||||||||| |||||||  |||||||||||||||||||||||||| |||||||
Sbjct: 5454875 ccccacctgctcgacgaggtagccgtcgcagaggaacgccttggagaaggtgtcctc 5454931

>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 141841

 Score =  113 bits (57), Expect = 5e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                         
Query: 291   agggcagaagggcgtgccgggcttctccctgtggctggggatgacgaagcgccggatcct 350
             ||||||||| |||||||||  ||| || | ||||||||||||||||||||| ||||| | 
Sbjct: 10982 agggcagaacggcgtgccgtccttgtcgcggtggctggggatgacgaagcggcggatgcg 10923

                                                                      
Query: 351   gccgacctgctcggcgaggtaagcgtcgcagaggaacgccttggagaagctgtcctc 407
              || ||||||||| |||||||  |||||||||||||||||||||||||| |||||||
Sbjct: 10922 ccccacctgctcgacgaggtagccgtcgcagaggaacgccttggagaaggtgtcctc 10866

>emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F04 of chromosome 12 of
            cultivar Nipponbare of ssp. japonica of Oryza sativa
            (rice), complete sequence
          Length = 160556

 Score =  113 bits (57), Expect = 5e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                        
Query: 291  agggcagaagggcgtgccgggcttctccctgtggctggggatgacgaagcgccggatcct 350
            ||||||||| |||||||||  ||| || | ||||||||||||||||||||| ||||| | 
Sbjct: 7631 agggcagaacggcgtgccgtccttgtcgcggtggctggggatgacgaagcggcggatgcg 7690

                                                                     
Query: 351  gccgacctgctcggcgaggtaagcgtcgcagaggaacgccttggagaagctgtcctc 407
             || ||||||||| |||||||  |||||||||||||||||||||||||| |||||||
Sbjct: 7691 ccccacctgctcgacgaggtagccgtcgcagaggaacgccttggagaaggtgtcctc 7747

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 396     gaagctgtcctccaccgcccggtcca 421
               ||||||| ||||||||||||||||||
Sbjct: 1328600 gaagctgccctccaccgcccggtcca 1328575

>gb|AC008129.21| Homo sapiens 12 BAC RP11-478H3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 77083

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 263   aatgggtaatggataatgatc 283
             |||||||||||||||||||||
Sbjct: 21997 aatgggtaatggataatgatc 21977

>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 384     gaacgccttggagaagctgt 403
               ||||||||||||||||||||
Sbjct: 1918299 gaacgccttggagaagctgt 1918318

>gb|AC161276.2| Pan troglodytes BAC clone CH251-520C21 from chromosome 7, complete
              sequence
          Length = 210088

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    ataaaatgggtaatggataa 278
              ||||||||||||||||||||
Sbjct: 155729 ataaaatgggtaatggataa 155748

>gb|AC125183.4| Mus musculus BAC clone RP23-297M4 from 5, complete sequence
          Length = 221622

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    agcatgcatgtgtgtcttga 219
              ||||||||||||||||||||
Sbjct: 141613 agcatgcatgtgtgtcttga 141632

>gb|AC006988.3| Homo sapiens BAC clone RP11-174I14 from 7, complete sequence
          Length = 107430

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 259   ataaaatgggtaatggataa 278
             ||||||||||||||||||||
Sbjct: 50801 ataaaatgggtaatggataa 50782

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 332    tgacgaagcgccggatcctgccgacctgctcggcga 367
              |||||| ||||||||| | |||| ||||||||||||
Sbjct: 681570 tgacgatgcgccggatgcggccgccctgctcggcga 681535



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 381    gaggaacgccttggagaagc 400
              ||||||||||||||||||||
Sbjct: 517351 gaggaacgccttggagaagc 517370

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    tgccgacctgctcggcgagg 369
              ||||||||||||||||||||
Sbjct: 697453 tgccgacctgctcggcgagg 697434

>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 253     aggtcgataaaatgggtaatggat 276
               ||||||||||||||| ||||||||
Sbjct: 3335340 aggtcgataaaatggttaatggat 3335363

>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16
          Length = 349315

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 381    gaggaacgccttggagaagc 400
              ||||||||||||||||||||
Sbjct: 303006 gaggaacgccttggagaagc 302987

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 381    gaggaacgccttggagaagc 400
              ||||||||||||||||||||
Sbjct: 289490 gaggaacgccttggagaagc 289471

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 407    ccaccgcccggtccacgtcg 426
              ||||||||||||||||||||
Sbjct: 885990 ccaccgcccggtccacgtcg 886009

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 199    cagcatgcatgtgtgtcttgatca 222
              ||||||||||||||||| ||||||
Sbjct: 715441 cagcatgcatgtgtgtcatgatca 715418

>dbj|AP003219.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0032H19
          Length = 126434

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 199   cagcatgcatgtgtgtcttgatca 222
             ||||||||||||||||| ||||||
Sbjct: 99185 cagcatgcatgtgtgtcatgatca 99162

>emb|CT025705.11| Pig DNA sequence from clone CH242-277H17 on chromosome 3, complete
             sequence
          Length = 181740

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   ttcagcatgcatgtgtgtct 216
             ||||||||||||||||||||
Sbjct: 90135 ttcagcatgcatgtgtgtct 90154



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   ttcagcatgcatgtgtgtct 216
             ||||||||||||||||||||
Sbjct: 15787 ttcagcatgcatgtgtgtct 15768


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,240,408
Number of Sequences: 3902068
Number of extensions: 3240408
Number of successful extensions: 62849
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62430
Number of HSP's gapped (non-prelim): 419
length of query: 427
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 405
effective length of database: 17,147,199,772
effective search space: 6944615907660
effective search space used: 6944615907660
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)