>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                            
Query: 243      tccttccagaagcacgtgtcgggcgccagccgcgcggacgaccgcaaaggctccgacttg 302
                |||||||||||||| |  |||||||||||||| || || || ||||  ||||| || |||
Sbjct: 14230274 tccttccagaagcaggcatcgggcgccagccgtgccgaggatcgcatcggctcggatttg 14230333

                           
Query: 303      cagcgcttcag 313
                |||||||||||
Sbjct: 14230334 cagcgcttcag 14230344

>dbj|AP004992.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0022O02
          Length = 176625

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                         
Query: 243   tccttccagaagcacgtgtcgggcgccagccgcgcggacgaccgcaaaggctccgacttg 302
             |||||||||||||| |  |||||||||||||| || || || ||||  ||||| || |||
Sbjct: 73738 tccttccagaagcaggcatcgggcgccagccgtgccgaggatcgcatcggctcggatttg 73797

                        
Query: 303   cagcgcttcag 313
             |||||||||||
Sbjct: 73798 cagcgcttcag 73808

>dbj|AK121496.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001G17, full
            insert sequence
          Length = 2971

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                        
Query: 243  tccttccagaagcacgtgtcgggcgccagccgcgcggacgaccgcaaaggctccgacttg 302
            |||||||||||||| |  |||||||||||||| || || || ||||  ||||| || |||
Sbjct: 2700 tccttccagaagcaggcatcgggcgccagccgtgccgaggatcgcatcggctcggatttg 2641

                       
Query: 303  cagcgcttcag 313
            |||||||||||
Sbjct: 2640 cagcgcttcag 2630

>dbj|AK060651.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H04, full
            insert sequence
          Length = 1348

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                        
Query: 243  tccttccagaagcacgtgtcgggcgccagccgcgcggacgaccgcaaaggctccgacttg 302
            |||||||||||||| |  |||||||||||||| || || || ||||  ||||| || |||
Sbjct: 1117 tccttccagaagcaggcatcgggcgccagccgtgccgaggatcgcatcggctcggatttg 1058

                       
Query: 303  cagcgcttcag 313
            |||||||||||
Sbjct: 1057 cagcgcttcag 1047

>ref|XM_519558.1| PREDICTED: Pan troglodytes similar to Prkr interacting protein 1
           (IL11 inducible) (LOC463931), mRNA
          Length = 1006

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 358 gctccagcttgagcttctgctcc 380
           |||||||||||||||||||||||
Sbjct: 109 gctccagcttgagcttctgctcc 87

>ref|NM_025774.1| Mus musculus Prkr interacting protein 1 (IL11 inducible) (Prkrip1),
           mRNA
          Length = 926

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 358 gctccagcttgagcttctgctcc 380
           |||||||||||||||||||||||
Sbjct: 164 gctccagcttgagcttctgctcc 142

>gb|AC083890.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-284P20, complete
             sequence
          Length = 203967

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 358   gctccagcttgagcttctgctcc 380
             |||||||||||||||||||||||
Sbjct: 20295 gctccagcttgagcttctgctcc 20317

>gb|AC073517.6| Homo sapiens BAC clone RP11-163E9 from 7, complete sequence
          Length = 67706

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 358   gctccagcttgagcttctgctcc 380
             |||||||||||||||||||||||
Sbjct: 35481 gctccagcttgagcttctgctcc 35503

>gb|BC066362.1| Homo sapiens cDNA clone IMAGE:6153863, **** WARNING: chimeric clone
            ****
          Length = 3426

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 358  gctccagcttgagcttctgctcc 380
            |||||||||||||||||||||||
Sbjct: 1403 gctccagcttgagcttctgctcc 1381

>emb|CR860865.1| Pongo pygmaeus mRNA; cDNA DKFZp469A022 (from clone DKFZp469A022)
          Length = 2173

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 358 gctccagcttgagcttctgctcc 380
           |||||||||||||||||||||||
Sbjct: 156 gctccagcttgagcttctgctcc 134

>gb|BC014298.2| Homo sapiens PRKR interacting protein 1 (IL11 inducible), mRNA
           (cDNA clone MGC:14980 IMAGE:3940868), complete cds
          Length = 2162

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 358 gctccagcttgagcttctgctcc 380
           |||||||||||||||||||||||
Sbjct: 143 gctccagcttgagcttctgctcc 121

>dbj|AK098276.1| Homo sapiens cDNA FLJ40957 fis, clone UTERU2011574, moderately
            similar to Human PMS2 related (hPMSR3) gene
          Length = 2134

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 358  gctccagcttgagcttctgctcc 380
            |||||||||||||||||||||||
Sbjct: 1249 gctccagcttgagcttctgctcc 1227

>emb|CR599339.1| full-length cDNA clone CS0DG002YM12 of B cells (Ramos cell line) of
           Homo sapiens (human)
          Length = 2086

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 358 gctccagcttgagcttctgctcc 380
           |||||||||||||||||||||||
Sbjct: 119 gctccagcttgagcttctgctcc 97

>dbj|AK023964.1| Homo sapiens cDNA FLJ13902 fis, clone THYRO1001793
          Length = 2175

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 358 gctccagcttgagcttctgctcc 380
           |||||||||||||||||||||||
Sbjct: 160 gctccagcttgagcttctgctcc 138

>dbj|AK010961.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched
           library, clone:2510012F10 product:THYRO1001793 PROTEIN
           homolog [Homo sapiens], full insert sequence
          Length = 926

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 358 gctccagcttgagcttctgctcc 380
           |||||||||||||||||||||||
Sbjct: 164 gctccagcttgagcttctgctcc 142

>gb|AC093668.4| Homo sapiens BAC clone RP11-514P8 from 7, complete sequence
          Length = 200771

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 358   gctccagcttgagcttctgctcc 380
             |||||||||||||||||||||||
Sbjct: 10473 gctccagcttgagcttctgctcc 10451

>dbj|AK010359.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:2410003H18 product:THYRO1001793 PROTEIN homolog
           [Homo sapiens], full insert sequence
          Length = 918

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 358 gctccagcttgagcttctgctcc 380
           |||||||||||||||||||||||
Sbjct: 143 gctccagcttgagcttctgctcc 121

>dbj|AK088862.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430029F11
           product:THYRO1001793 PROTEIN homolog [Homo sapiens],
           full insert sequence
          Length = 927

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 358 gctccagcttgagcttctgctcc 380
           |||||||||||||||||||||||
Sbjct: 163 gctccagcttgagcttctgctcc 141

>dbj|AK018438.1| Mus musculus 16 days embryo lung cDNA, RIKEN full-length enriched
           library, clone:8430424D23 product:THYRO1001793 PROTEIN
           homolog [Homo sapiens], full insert sequence
          Length = 885

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 358 gctccagcttgagcttctgctcc 380
           |||||||||||||||||||||||
Sbjct: 110 gctccagcttgagcttctgctcc 88

>gb|BC027503.1| Mus musculus Prkr interacting protein 1 (IL11 inducible), mRNA
           (cDNA clone MGC:41035 IMAGE:1494676), complete cds
          Length = 914

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 358 gctccagcttgagcttctgctcc 380
           |||||||||||||||||||||||
Sbjct: 128 gctccagcttgagcttctgctcc 106

>ref|NM_024653.1| Homo sapiens PRKR interacting protein 1 (IL11 inducible) (PRKRIP1),
           mRNA
          Length = 2175

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 358 gctccagcttgagcttctgctcc 380
           |||||||||||||||||||||||
Sbjct: 160 gctccagcttgagcttctgctcc 138

>emb|CR759819.7| Zebrafish DNA sequence from clone CH211-178L23, complete sequence
          Length = 118312

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 35    ccacatcacataactaacagcacgta 60
             |||||||||||||||||||| |||||
Sbjct: 93720 ccacatcacataactaacagtacgta 93745

>emb|CR354606.12| Zebrafish DNA sequence from clone CH211-252L23 in linkage group 18,
              complete sequence
          Length = 138838

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 35     ccacatcacataactaacagcacgta 60
              |||||||||||||||||||| |||||
Sbjct: 108314 ccacatcacataactaacagtacgta 108339

>emb|AL359546.19| Human DNA sequence from clone RP11-125C10 on chromosome 10 Contains the
             5' end of the gene for a novel protein (LOC220929)
             (FLJ32761) and two CpG islands, complete sequence
          Length = 174470

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 365   cttgagcttctgctccatgac 385
             |||||||||||||||||||||
Sbjct: 39970 cttgagcttctgctccatgac 39950

>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16
          Length = 343473

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 299    cttgcagcgcttcaggacgagcggcgcgt 327
              ||||||||||| ||| |||||||||||||
Sbjct: 324600 cttgcagcgctccagcacgagcggcgcgt 324628

>gb|AY109792.1| Zea mays CL22067_1 mRNA sequence
          Length = 700

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 243 tccttccagaagcacgtgtcgggcgccagccgcgcggacgaccgcaaaggctccgacttg 302
           |||||||||||||| |  ||||| |||| |||||| || || ||||  ||||| ||||||
Sbjct: 326 tccttccagaagcaagcatcgggtgccaaccgcgctgatgatcgcatcggctctgacttg 385

                                        
Query: 303 cagcgcttcaggacgagcggcgcgtaggc 331
           || |  ||||| |||| ||| ||||||||
Sbjct: 386 caccttttcagaacgaacggggcgtaggc 414

>gb|AC095023.2| Sus scrofa clone RP44-405I2, complete sequence
          Length = 51739

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 360   tccagcttgagcttctgctcc 380
             |||||||||||||||||||||
Sbjct: 29013 tccagcttgagcttctgctcc 29033

>ref|NM_185520.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1203

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 387 ggcttcggtggtggcttcgg 406
           ||||||||||||||||||||
Sbjct: 976 ggcttcggtggtggcttcgg 995

>ref|XM_872365.1| PREDICTED: Bos taurus hypothetical protein LOC613419 (LOC613419),
           partial mRNA
          Length = 196

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 cggcagctccagcttgagct 372
           ||||||||||||||||||||
Sbjct: 117 cggcagctccagcttgagct 98

>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12
          Length = 340900

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 329    ggcagccacgccggctgcgaccttcggcagct 360
              ||||||||||||||| ||||| |||| |||||
Sbjct: 258462 ggcagccacgccggcggcgacgttcgccagct 258431

>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16
          Length = 349315

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 202    agaagccgatcccggtggcg 221
              ||||||||||||||||||||
Sbjct: 338808 agaagccgatcccggtggcg 338789

>gb|AC118557.2| Homo sapiens chromosome 1 clone RP11-499N7, complete sequence
          Length = 168688

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     aaaaacaagctcactacaat 91
              ||||||||||||||||||||
Sbjct: 126103 aaaaacaagctcactacaat 126122

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 387      ggcttcggtggtggcttcgg 406
                ||||||||||||||||||||
Sbjct: 29215301 ggcttcggtggtggcttcgg 29215282

>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0597G07
          Length = 152928

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 387  ggcttcggtggtggcttcgg 406
            ||||||||||||||||||||
Sbjct: 3990 ggcttcggtggtggcttcgg 3971

>dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1165_F02
          Length = 125993

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   ggcttcggtggtggcttcgg 406
             ||||||||||||||||||||
Sbjct: 55375 ggcttcggtggtggcttcgg 55356

>emb|BX511205.2|RN120J22 Rattus norvegicus chromosome 1 BAC RP32-120J22, complete sequence
          Length = 160764

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     acgtaccaagcatggaaaaa 75
              ||||||||||||||||||||
Sbjct: 108680 acgtaccaagcatggaaaaa 108699

>emb|AL672054.5| Mouse DNA sequence from clone RP23-237I22 on chromosome X, complete
             sequence
          Length = 187770

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    aagcatggaaaaaacaagct 82
             ||||||||||||||||||||
Sbjct: 66693 aagcatggaaaaaacaagct 66712


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,832,842
Number of Sequences: 3902068
Number of extensions: 2832842
Number of successful extensions: 52881
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52783
Number of HSP's gapped (non-prelim): 98
length of query: 417
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 395
effective length of database: 17,147,199,772
effective search space: 6773143909940
effective search space used: 6773143909940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)