| Clone Name | rbaet119b10 |
|---|---|
| Clone Library Name | barley_pub |
>LPP1_ARATH (Q9ZU49) Lipid phosphate phosphatase 1 (EC 3.1.3.-) (AtLPP1)| (Phosphatidic acid phosphatase 1) (AtPAP1) (Prenyl diphosphate phosphatase) Length = 327 Score = 48.9 bits (115), Expect = 7e-06 Identities = 26/84 (30%), Positives = 47/84 (55%) Frame = -2 Query: 475 VFAGGILGLVVASFCYLRFFPHPASKKGLWPHAFHLHNLNPETENQVTTDTHQSGLPHDL 296 VFAG ++G +VA+FCY +F+P+P ++G P+A+ E V + Q+G Sbjct: 250 VFAGALIGTLVAAFCYRQFYPNPYHEEGWGPYAY----FKAAQERGVPVTSSQNG----- 300 Query: 295 SMVPYVPSMEMRTNGRALDNMEAG 224 + +M ++ + +L+NME+G Sbjct: 301 ---DALRAMSLQMDSTSLENMESG 321
>LPP2_ARATH (Q9XI60) Lipid phosphate phosphatase 2 (EC 3.1.3.-) (AtLPP2)| (Phosphatidic acid phosphatase 2) (AtPAP2) (Prenyl diphosphate phosphatase) Length = 290 Score = 47.8 bits (112), Expect = 1e-05 Identities = 20/34 (58%), Positives = 24/34 (70%) Frame = -2 Query: 475 VFAGGILGLVVASFCYLRFFPHPASKKGLWPHAF 374 VF G I+GL VA+FCYL+FFP P G PHA+ Sbjct: 226 VFGGAIIGLTVATFCYLQFFPPPYDPDGWGPHAY 259
>LPP3_ARATH (Q8LFD1) Putative lipid phosphate phosphatase 3, chloroplast| precursor (EC 3.1.3.-) (AtLPP3) (Phosphatidic acid phosphatase 3) (Phosphatidate phosphohydrolase 3) Length = 364 Score = 45.8 bits (107), Expect = 6e-05 Identities = 18/34 (52%), Positives = 26/34 (76%) Frame = -2 Query: 475 VFAGGILGLVVASFCYLRFFPHPASKKGLWPHAF 374 VFAGG+LGL +++ CYL+FFP P +G P+A+ Sbjct: 275 VFAGGLLGLAISTICYLQFFPPPYHTEGWGPYAY 308
>CHS2_NEUCR (P30589) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 2) Length = 944 Score = 30.0 bits (66), Expect = 3.2 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +2 Query: 41 GLDQLQSNATNKIAQVYLSLQETYTEQDFY*YLPTYKVVSLMV 169 G D+ N +++ SL E +QD+Y + TY VVS MV Sbjct: 805 GYDECLRNLRDRVMVPCRSLSEDQLQQDYYKSVRTYMVVSWMV 847
>TAH18_USTMA (Q4P3D8) Probable NADPH reductase TAH18 (EC 1.-.-.-)| Length = 616 Score = 29.6 bits (65), Expect = 4.2 Identities = 21/65 (32%), Positives = 32/65 (49%) Frame = +3 Query: 72 IKLRKFIYLYKKHIQNKTSTSTYLPTRWCLSWCMPTSIPMVVLFSYQTLPPPASMLSNAR 251 I+L + YK ++ T L TRW S + + +P+V+ Y TLPP + Sbjct: 413 IQLSVAMVKYKTRLRK---ARTGLCTRWLSSLPLGSRVPVVIKPGYLTLPPAQA------ 463 Query: 252 PLVLI 266 PL+LI Sbjct: 464 PLILI 468
>SYFB_HAEIN (P43820) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 795 Score = 29.6 bits (65), Expect = 4.2 Identities = 19/59 (32%), Positives = 31/59 (52%) Frame = +2 Query: 143 TYKVVSLMVHAYLHPHGGLIQLPNSAAAGLHVIQRSAIGSHLHGGNIWNHGQVVRQSRL 319 TY V + + LHPH + LPN + + ++ S I S L G ++N + +QSR+ Sbjct: 512 TYSFVDPKIQSLLHPHQEALVLPNPISVEMSAMRVSLI-SGLLGAVLYNQNR--QQSRV 567
>SYFB_HAEI8 (Q4QKM3) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 795 Score = 29.6 bits (65), Expect = 4.2 Identities = 19/59 (32%), Positives = 31/59 (52%) Frame = +2 Query: 143 TYKVVSLMVHAYLHPHGGLIQLPNSAAAGLHVIQRSAIGSHLHGGNIWNHGQVVRQSRL 319 TY V + + LHPH + LPN + + ++ S I S L G ++N + +QSR+ Sbjct: 512 TYSFVDPKIQSLLHPHKEALVLPNPISVEMSAMRVSLI-SGLLGAVLYNQNR--QQSRV 567
>RASA2_MOUSE (P58069) Ras GTPase-activating protein 2 (GAP1m)| Length = 848 Score = 29.3 bits (64), Expect = 5.5 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = -2 Query: 445 VASFCYLRFFPHPASKKGLWPHAFHLHNLNPETE 344 V+SF +LRFF L PHAFHL P+T+ Sbjct: 504 VSSFVFLRFFAVAI----LSPHAFHLRPHYPDTQ 533
>RASA2_RAT (Q63713) Ras GTPase-activating protein 2 (GAP1m)| Length = 847 Score = 29.3 bits (64), Expect = 5.5 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = -2 Query: 445 VASFCYLRFFPHPASKKGLWPHAFHLHNLNPETE 344 V+SF +LRFF L PHAFHL P+T+ Sbjct: 503 VSSFVFLRFFAVAI----LSPHAFHLRPHYPDTQ 532
>PSBA_PALPL (O98733) Photosystem Q(B) protein (32 kDa thylakoid membrane| protein) (Photosystem II protein D1) Length = 360 Score = 29.3 bits (64), Expect = 5.5 Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 3/48 (6%) Frame = +2 Query: 206 LPNSAAAGLH---VIQRSAIGSHLHGGNIWNHGQVVRQSRLMGICCYL 340 +P+SAA G+H + + +++ L+ G + Q++ L+G+CCY+ Sbjct: 83 IPSSAAIGIHFYPIWEAASLDEWLYNGGPY---QLIVLHFLLGVCCYI 127
>PSBA_ANTSP (P24625) Photosystem Q(B) protein (32 kDa thylakoid membrane| protein) (Photosystem II protein D1) Length = 360 Score = 29.3 bits (64), Expect = 5.5 Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 3/48 (6%) Frame = +2 Query: 206 LPNSAAAGLH---VIQRSAIGSHLHGGNIWNHGQVVRQSRLMGICCYL 340 +P+SAA G+H + + +++ L+ G + Q++ L+G+CCY+ Sbjct: 83 IPSSAAIGIHFYPIWEAASLDEWLYNGGPY---QLIVLHFLLGVCCYI 127
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 28.5 bits (62), Expect = 9.4 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -1 Query: 266 DENQWPSVG*HGGRRRQSLVTE*DHHGDGGRHA 168 +E WP GG R + E HHGD GRH+ Sbjct: 3618 EEGLWPHD--EGGPGRHTSAKEHRHHGDHGRHS 3648
>ATS16_HUMAN (Q8TE57) ADAMTS-16 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 16) (ADAM-TS 16) (ADAM-TS16) Length = 1224 Score = 28.5 bits (62), Expect = 9.4 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 3/47 (6%) Frame = +1 Query: 217 CRRRPP---CYPTLGHWFSSPWREHMEPWTGRAAVQTDGYLLLLGSQ 348 C R PP P+ G WF+SPW + G VQT L G + Sbjct: 1114 CPRHPPFAAAGPSRGSWFASPWSQCTASCGG--GVQTRSVQCLAGGR 1158
>POXM_DROME (P23757) Paired box pox-meso protein (Paired box mesodermal| protein) Length = 402 Score = 28.5 bits (62), Expect = 9.4 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Frame = -2 Query: 313 GLPHDLSMVPYVPSMEMRT-NGRALDNMEAGGGRVW*LNKTTMGMEVGMHHERHH 152 G+ +S +P PS T G+ L + E G G+ N GMHH HH Sbjct: 337 GMGSTVSPLPMTPSPVAGTAGGQPLLDCEGGAGQQSPYNYYMYFQNGGMHHHHHH 391
>DLL1_XENLA (P53773) Homeobox protein DLL-1 (DLL) (XDLL)| Length = 250 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +1 Query: 187 PWWSYSVTKLCRRRPPCY-PTLGHWFSSPWREHME 288 P W S +K P Y P HW+SSP ++ M+ Sbjct: 211 PVWDVSASKGVSMAPNSYMPGYSHWYSSPHQDTMQ 245 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,496,380 Number of Sequences: 219361 Number of extensions: 1778539 Number of successful extensions: 5138 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 5008 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5138 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)