ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet119a09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GR33A_DROME (Q9VKA5) Putative gustatory receptor 33a 29 5.2

>GR33A_DROME (Q9VKA5) Putative gustatory receptor 33a|
          Length = 475

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
 Frame = +1

Query: 154 MRTHQLYPNKPSNQITQDKRSNQSCS-------WSSALRRNGLNLVTLTMTSCFMTISAS 312
           M  H++   KP+  ++ D   N+  S       W    + NG+ L  L  T  F T+SA+
Sbjct: 393 MIVHEIMQKKPAFMLSNDLFYNKMKSFTLQFLHWEGFFQFNGVGLFALDYTFIFSTVSAA 452

Query: 313 AGH 321
             +
Sbjct: 453 TSY 455


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,472,528
Number of Sequences: 219361
Number of extensions: 968214
Number of successful extensions: 2377
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2373
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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