ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet119a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478653.1| Oryza sativa (japonica cultivar-group), mRNA 111 2e-21
2dbj|AK109507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
3ref|XM_478654.1| Oryza sativa (japonica cultivar-group), mRNA 98 3e-17
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
5dbj|AK060720.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 3e-17
6dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
7gb|AY104756.1| Zea mays PCO067622 mRNA sequence 72 2e-09
8gb|BT016476.1| Zea mays clone Contig309 mRNA sequence 64 4e-07
9gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
11dbj|AK060312.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
12gb|AY104155.1| Zea mays PCO077380 mRNA sequence 54 4e-04
13gb|BT017743.1| Zea mays clone EL01N0449E08.c mRNA sequence 52 0.002
14gb|AC169511.1| Mus musculus BAC clone RP23-81P24 from chromosome... 46 0.095
15gb|AC118610.9| Mus musculus chromosome 6, clone RP23-178I17, com... 44 0.37
16gb|AC121356.10| Mus musculus chromosome 6, clone RP23-52D17, com... 44 0.37
17gb|AY104923.1| Zea mays PCO144363 mRNA sequence 44 0.37
18gb|AC140437.3| Mus musculus BAC clone RP23-88N2 from chromosome ... 42 1.5
19dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
20gb|AC175664.2| Mus musculus BAC clone RP24-391A3 from chromosome... 42 1.5
21dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
22dbj|AP004751.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
23gb|AY692264.1| Bacteriophage T5 strain st0 deletion mutant, comp... 40 5.8
24gb|AC102505.8| Mus musculus chromosome 1, clone RP24-73K7, compl... 40 5.8
25gb|AY543070.1| Bacteriophage T5, complete genome 40 5.8
26ref|XM_536036.2| PREDICTED: Canis familiaris similar to WD-repea... 40 5.8
27ref|XM_854196.1| PREDICTED: Canis familiaris similar to WD-repea... 40 5.8
28gb|AC147741.11| Medicago truncatula clone mth2-17b23, complete s... 40 5.8
29emb|AL139375.18| Human DNA sequence from clone RP11-138N13 on ch... 40 5.8
30gb|AC128710.2| Homo sapiens 3 BAC RP11-307C21 (Roswell Park Canc... 40 5.8
31dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 40 5.8
32gb|AY587007.1| Bacteriophage T5 strain ATCC 11303-B5, complete g... 40 5.8
33gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 5.8 
>ref|XM_478653.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1352

 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                       
Query: 228 atcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcacag 287
           ||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 911 atcaagtatccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcacag 852

                           
Query: 288 ggtggagcacgtcctc 303
           |||| ||||| |||||
Sbjct: 851 ggtgcagcacttcctc 836



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 341 ccgccctctgctacagcatcatcaggggtacgcaccaccaccacggggcaaatacagtgg 400
           |||||||| || ||| |||| || |||  ||||||||||||||||||||| | |||||||
Sbjct: 801 ccgccctccgccacaccatcgtcggggaaacgcaccaccaccacggggcacacacagtgg 742

                            
Query: 401 tggacgcagtaatcgct 417
           || ||||||||||||||
Sbjct: 741 tgcacgcagtaatcgct 725



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 155 tagcactcagccaacagtcgaatgctaggacctttacatgctggatccaacaggacat 212
           |||||| |||| |||||| || |||||| |||||||||||||||||| || |||||||
Sbjct: 983 tagcacccagcaaacagttgactgctagaacctttacatgctggatcaaagaggacat 926
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>dbj|AK109507.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E04, full
           insert sequence
          Length = 1351

 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                       
Query: 228 atcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcacag 287
           ||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 911 atcaagtatccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcacag 852

                           
Query: 288 ggtggagcacgtcctc 303
           |||| ||||| |||||
Sbjct: 851 ggtgcagcacttcctc 836



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 341 ccgccctctgctacagcatcatcaggggtacgcaccaccaccacggggcaaatacagtgg 400
           |||||||| || ||| |||| || |||  ||||||||||||||||||||| | |||||||
Sbjct: 801 ccgccctccgccacaccatcgtcggggaaacgcaccaccaccacggggcacacacagtgg 742

                            
Query: 401 tggacgcagtaatcgct 417
           || ||||||||||||||
Sbjct: 741 tgcacgcagtaatcgct 725



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 155 tagcactcagccaacagtcgaatgctaggacctttacatgctggatccaacaggacat 212
           |||||| |||| |||||| || |||||| |||||||||||||||||| || |||||||
Sbjct: 983 tagcacccagcaaacagttgactgctagaacctttacatgctggatcaaagaggacat 926
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>ref|XM_478654.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1330

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                       
Query: 227 aatcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcaca 286
           |||||| || |||| ||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 867 aatcaattacccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcaca 808

                            
Query: 287 gggtggagcacgtcctc 303
           ||||| ||||| |||||
Sbjct: 807 gggtgcagcacttcctc 791



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 341 ccgccctctgctacagcatcatcaggggtacgcaccaccaccacggggcaaatacagtgg 400
           |||||||| || ||| |||| || |||  ||||||||||||||||||||| | |||||||
Sbjct: 756 ccgccctccgccacaccatcgtcggggaaacgcaccaccaccacggggcacacacagtgg 697

                            
Query: 401 tggacgcagtaatcgct 417
           || ||||||||||||||
Sbjct: 696 tgcacgcagtaatcgct 680
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                            
Query: 227      aatcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcaca 286
                |||||| || |||| ||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 21844121 aatcaattacccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcaca 21844180

                                 
Query: 287      gggtggagcacgtcctc 303
                ||||| ||||| |||||
Sbjct: 21844181 gggtgcagcacttcctc 21844197



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                            
Query: 341      ccgccctctgctacagcatcatcaggggtacgcaccaccaccacggggcaaatacagtgg 400
                |||||||| || ||| |||| || |||  ||||||||||||||||||||| | |||||||
Sbjct: 21844232 ccgccctccgccacaccatcgtcggggaaacgcaccaccaccacggggcacacacagtgg 21844291

                                 
Query: 401      tggacgcagtaatcgct 417
                || ||||||||||||||
Sbjct: 21844292 tgcacgcagtaatcgct 21844308



 Score = 46.1 bits (23), Expect = 0.095
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                           
Query: 155      tagcactcagccaacagtcgaatgctaggacctttacatgctg 197
                |||||| |||| |||||| || |||||| ||||||||||||||
Sbjct: 21841655 tagcacccagcaaacagttgactgctagaacctttacatgctg 21841697
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>dbj|AK060720.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-F04, full
           insert sequence
          Length = 1330

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                       
Query: 227 aatcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcaca 286
           |||||| || |||| ||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 867 aatcaattacccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcaca 808

                            
Query: 287 gggtggagcacgtcctc 303
           ||||| ||||| |||||
Sbjct: 807 gggtgcagcacttcctc 791



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 341 ccgccctctgctacagcatcatcaggggtacgcaccaccaccacggggcaaatacagtgg 400
           |||||||| || ||| |||| || |||  ||||||||||||||||||||| | |||||||
Sbjct: 756 ccgccctccgccacaccatcgtcggggaaacgcaccaccaccacggggcacacacagtgg 697

                            
Query: 401 tggacgcagtaatcgct 417
           || ||||||||||||||
Sbjct: 696 tgcacgcagtaatcgct 680
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>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0041B22
          Length = 142446

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                         
Query: 227   aatcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcaca 286
             |||||| || |||| ||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 57797 aatcaattacccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcaca 57856

                              
Query: 287   gggtggagcacgtcctc 303
             ||||| ||||| |||||
Sbjct: 57857 gggtgcagcacttcctc 57873



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                         
Query: 341   ccgccctctgctacagcatcatcaggggtacgcaccaccaccacggggcaaatacagtgg 400
             |||||||| || ||| |||| || |||  ||||||||||||||||||||| | |||||||
Sbjct: 57908 ccgccctccgccacaccatcgtcggggaaacgcaccaccaccacggggcacacacagtgg 57967

                              
Query: 401   tggacgcagtaatcgct 417
             || ||||||||||||||
Sbjct: 57968 tgcacgcagtaatcgct 57984



 Score = 46.1 bits (23), Expect = 0.095
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 155   tagcactcagccaacagtcgaatgctaggacctttacatgctg 197
             |||||| |||| |||||| || |||||| ||||||||||||||
Sbjct: 55331 tagcacccagcaaacagttgactgctagaacctttacatgctg 55373
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>gb|AY104756.1| Zea mays PCO067622 mRNA sequence
          Length = 637

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 155 tagcactcagccaacagtcgaatgctaggacctttacatgctggatccaacaggac 210
           |||||| ||||||||||||||||||||| |||| ||||||||| |||||| |||||
Sbjct: 496 tagcacccagccaacagtcgaatgctagaacctctacatgctgaatccaagaggac 441



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                       
Query: 229 tcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcacagg 288
           ||||| |||||| |||||||| || ||||||||||||||| | || ||||| ||||| ||
Sbjct: 420 tcaagcatccttgtgctcctccgcagcgtcatggtactcgccttcttcctccggcacggg 361

                                      
Query: 289 gtggagcacgtcctctgcgccaaccgc 315
           ||| ||||| ||||| || ||||||||
Sbjct: 360 gtgcagcacatcctcagcaccaaccgc 334



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 371 cgcaccaccaccacggggcaaatacagtggtggacgcagta 411
           ||||||||||| |||||||| | ||||||||| ||||||||
Sbjct: 281 cgcaccaccacaacggggcagacacagtggtgcacgcagta 241
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>gb|BT016476.1| Zea mays clone Contig309 mRNA sequence
          Length = 1258

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 155 tagcactcagccaacagtcgaatgctaggacctttacatgctggatccaacaggac 210
           |||||| ||||||||||||||||||||  |||| ||||||||| |||||| |||||
Sbjct: 261 tagcacccagccaacagtcgaatgctaaaacctctacatgctgaatccaagaggac 316



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 371 cgcaccaccaccacggggcaaatacagtggtggacgcagtaatcgctcacactcccgagc 430
           ||||||||||| |||||||| | ||||||||| |||||||| ||||| || || ||||||
Sbjct: 476 cgcaccaccacaacggggcagacacagtggtgcacgcagtagtcgctgacgctgccgagc 535

             
Query: 431 ct 432
           ||
Sbjct: 536 ct 537



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Plus

                                                                       
Query: 230 caagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcacaggg 289
           |||| |||||| |||||||| || ||||||||||||||| | || ||||| ||||| |||
Sbjct: 338 caagcatccttgtgctcctccgcagcgtcatggtactcgccttcttcctccggcacgggg 397

                                     
Query: 290 tggagcacgtcctctgcgccaaccgc 315
            | || || ||||| || ||||||||
Sbjct: 398 ggcagaacatcctcagcaccaaccgc 423
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>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017K09, complete sequence
          Length = 155525

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                         
Query: 357   catcatcaggggtacgcaccaccaccacggggcaaatacagtggtggacgcagtaatcgc 416
             |||||||||||   ||||| ||||| |||||||| |  |||||||| |||||||| ||||
Sbjct: 66009 catcatcagggtagcgcacgaccacgacggggcagacgcagtggtgcacgcagtagtcgc 65950

                             
Query: 417   tcacactcccgagcct 432
             | || |||||||||||
Sbjct: 65949 tgacgctcccgagcct 65934
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                            
Query: 357      catcatcaggggtacgcaccaccaccacggggcaaatacagtggtggacgcagtaatcgc 416
                |||||||||||   ||||| ||||| |||||||| |  |||||||| |||||||| ||||
Sbjct: 24551827 catcatcagggtagcgcacgaccacgacggggcagacgcagtggtgcacgcagtagtcgc 24551768

                                
Query: 417      tcacactcccgagcct 432
                | || |||||||||||
Sbjct: 24551767 tgacgctcccgagcct 24551752
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>dbj|AK060312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C02, full
           insert sequence
          Length = 1118

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                       
Query: 357 catcatcaggggtacgcaccaccaccacggggcaaatacagtggtggacgcagtaatcgc 416
           |||||||||||   ||||| ||||| |||||||| |  |||||||| |||||||| ||||
Sbjct: 793 catcatcagggtagcgcacgaccacgacggggcagacgcagtggtgcacgcagtagtcgc 734

                           
Query: 417 tcacactcccgagcct 432
           | || |||||||||||
Sbjct: 733 tgacgctcccgagcct 718
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>gb|AY104155.1| Zea mays PCO077380 mRNA sequence
          Length = 1011

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 66/79 (83%)
 Strand = Plus / Minus

                                                                       
Query: 354 cagcatcatcaggggtacgcaccaccaccacggggcaaatacagtggtggacgcagtaat 413
           ||||||||||||||   || || ||||| |||||||| | ||||||||| || |||||||
Sbjct: 450 cagcatcatcagggtagcgaacaaccacaacggggcatacacagtggtgtacacagtaat 391

                              
Query: 414 cgctcacactcccgagcct 432
           | || |||||||| |||||
Sbjct: 390 cactaacactcccaagcct 372
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>gb|BT017743.1| Zea mays clone EL01N0449E08.c mRNA sequence
          Length = 1322

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                       
Query: 354 cagcatcatcaggggtacgcaccaccaccacggggcaaatacagtggtggacgcagtaat 413
           ||||||||||||||   || || ||||| || ||||| | ||||||||| ||||||||||
Sbjct: 827 cagcatcatcagggtagcgaacaaccacaacagggcatacacagtggtgtacgcagtaat 768

                             
Query: 414 cgctcacactcccgagcc 431
           | || |||||||| ||||
Sbjct: 767 cactaacactcccaagcc 750
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>gb|AC169511.1| Mus musculus BAC clone RP23-81P24 from chromosome 14, complete sequence
          Length = 252587

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 31    atccaataagcacaaaagttcta 53
             |||||||||||||||||||||||
Sbjct: 66495 atccaataagcacaaaagttcta 66473
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>gb|AC118610.9| Mus musculus chromosome 6, clone RP23-178I17, complete sequence
          Length = 255673

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 211    attgatgcatggatccaatcaa 232
              ||||||||||||||||||||||
Sbjct: 225438 attgatgcatggatccaatcaa 225417
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>gb|AC121356.10| Mus musculus chromosome 6, clone RP23-52D17, complete sequence
          Length = 178055

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 211    attgatgcatggatccaatcaa 232
              ||||||||||||||||||||||
Sbjct: 169507 attgatgcatggatccaatcaa 169528
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>gb|AY104923.1| Zea mays PCO144363 mRNA sequence
          Length = 982

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 371 cgcaccaccaccacggggcaaatacagtggtggacgcagtaatcgctcacactcccgagc 430
           ||||| ||||| || ||||| | ||||||||| |||||||| || || || |||||||||
Sbjct: 378 cgcacaaccacaaccgggcagacacagtggtgcacgcagtagtcactgacgctcccgagc 319

             
Query: 431 ct 432
           ||
Sbjct: 318 ct 317
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>gb|AC140437.3| Mus musculus BAC clone RP23-88N2 from chromosome 8, complete sequence
          Length = 171402

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 86     gaagcacagatagacataaaacagtaaaa 114
              |||||||||||| ||||||||||| ||||
Sbjct: 168468 gaagcacagatacacataaaacagaaaaa 168496
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 288      ggtggagcacgtcctctgcgccaaccgcc 316
                ||||||||||||| |||| ||||||||||
Sbjct: 22126932 ggtggagcacgtcatctgtgccaaccgcc 22126904



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 207     ggacattgatgcatggatcca 227
               |||||||||||||||||||||
Sbjct: 7643376 ggacattgatgcatggatcca 7643356
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>gb|AC175664.2| Mus musculus BAC clone RP24-391A3 from chromosome 8, complete sequence
          Length = 168189

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 86     gaagcacagatagacataaaacagtaaaa 114
              |||||||||||| ||||||||||| ||||
Sbjct: 135611 gaagcacagatacacataaaacagaaaaa 135583
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>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1117_F10
          Length = 169948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 288   ggtggagcacgtcctctgcgccaaccgcc 316
             ||||||||||||| |||| ||||||||||
Sbjct: 89895 ggtggagcacgtcatctgtgccaaccgcc 89867
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>dbj|AP004751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0494D11
          Length = 149198

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 207   ggacattgatgcatggatcca 227
             |||||||||||||||||||||
Sbjct: 68571 ggacattgatgcatggatcca 68551
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>gb|AY692264.1| Bacteriophage T5 strain st0 deletion mutant, complete genome
          Length = 113238

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   tctgctacagcatcatcagg 366
             ||||||||||||||||||||
Sbjct: 55473 tctgctacagcatcatcagg 55454
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>gb|AC102505.8| Mus musculus chromosome 1, clone RP24-73K7, complete sequence
          Length = 209838

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 142    agaaaccccgaggtagcactcagc 165
              |||||||||||| |||||||||||
Sbjct: 148229 agaaaccccgagttagcactcagc 148252
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>gb|AY543070.1| Bacteriophage T5, complete genome
          Length = 121750

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   tctgctacagcatcatcagg 366
             ||||||||||||||||||||
Sbjct: 63528 tctgctacagcatcatcagg 63509
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>ref|XM_536036.2| PREDICTED: Canis familiaris similar to WD-repeat protein 12 (YTM1
           homolog), transcript variant 1 (LOC478876), mRNA
          Length = 1359

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  tggaagcacagatagacata 103
           ||||||||||||||||||||
Sbjct: 703 tggaagcacagatagacata 722
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>ref|XM_854196.1| PREDICTED: Canis familiaris similar to WD-repeat protein 12 (YTM1
           homolog), transcript variant 3 (LOC478876), mRNA
          Length = 1035

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  tggaagcacagatagacata 103
           ||||||||||||||||||||
Sbjct: 379 tggaagcacagatagacata 398
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>gb|AC147741.11| Medicago truncatula clone mth2-17b23, complete sequence
          Length = 110572

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     acaaatgttcaccaaataca 77
              ||||||||||||||||||||
Sbjct: 103064 acaaatgttcaccaaataca 103083
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>emb|AL139375.18| Human DNA sequence from clone RP11-138N13 on chromosome 13q21.33-22.3,
              complete sequence
          Length = 146708

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    gtaaaagtctaacaaacagc 128
              ||||||||||||||||||||
Sbjct: 116776 gtaaaagtctaacaaacagc 116795
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>gb|AC128710.2| Homo sapiens 3 BAC RP11-307C21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 135514

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 71     aaatacatcagagtggaagcacag 94
              |||||||||||| |||||||||||
Sbjct: 121799 aaatacatcagattggaagcacag 121822
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     atcagagtggaagcacagat 96
              ||||||||||||||||||||
Sbjct: 525304 atcagagtggaagcacagat 525323
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>gb|AY587007.1| Bacteriophage T5 strain ATCC 11303-B5, complete genome
          Length = 121752

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   tctgctacagcatcatcagg 366
             ||||||||||||||||||||
Sbjct: 63599 tctgctacagcatcatcagg 63580
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 69      ccaaatacatcagagtggaa 88
               ||||||||||||||||||||
Sbjct: 1387432 ccaaatacatcagagtggaa 1387413


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,730,221
Number of Sequences: 3902068
Number of extensions: 3730221
Number of successful extensions: 72507
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 72312
Number of HSP's gapped (non-prelim): 196
length of query: 435
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 413
effective length of database: 17,147,199,772
effective search space: 7081793505836
effective search space used: 7081793505836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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