| Clone Name | rbaet117g08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ref|XM_418704.1| PREDICTED: Gallus gallus similar to TWIST neigh... | 40 | 3.7 | 2 | gb|AF423072.1|AF423072 Homo sapiens signal transducer and activa... | 40 | 3.7 | 3 | gb|AC067945.4| Homo sapiens BAC clone RP11-629B4 from 2, complet... | 40 | 3.7 |
|---|
>ref|XM_418704.1| PREDICTED: Gallus gallus similar to TWIST neighbor (LOC420603), mRNA Length = 1054 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 ggatgaagccctggtcgtcg 230 |||||||||||||||||||| Sbjct: 324 ggatgaagccctggtcgtcg 305
>gb|AF423072.1|AF423072 Homo sapiens signal transducer and activator of transcription 4 (STAT4) gene, partial cds Length = 52796 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 acagacatatttatatgcag 24 |||||||||||||||||||| Sbjct: 9474 acagacatatttatatgcag 9455
>gb|AC067945.4| Homo sapiens BAC clone RP11-629B4 from 2, complete sequence Length = 162471 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 acagacatatttatatgcag 24 |||||||||||||||||||| Sbjct: 145661 acagacatatttatatgcag 145680 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,524,580 Number of Sequences: 3902068 Number of extensions: 1524580 Number of successful extensions: 38201 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 38198 Number of HSP's gapped (non-prelim): 3 length of query: 282 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 260 effective length of database: 17,147,199,772 effective search space: 4458271940720 effective search space used: 4458271940720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)