ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet117g04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1831 bp) Length = 1831 Score = 886 bits (447), Expect = 0.0 Identities = 450/451 (99%) Strand = Plus / Minus Query: 1 agcaaaaaagaagccacgtagtattagcataattcaccccaaaatacaacgacaatatct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1754 agcaaaaaagaagccacgtagtattagcataattcaccccaaaatacaacgacaatatct 1695 Query: 61 gtaggtaaagctgcgggtccgccatggctgagcagctacacaattaacaacatacgtcga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1694 gtaggtaaagctgcgggtccgccatggctgagcagctacacaattaacaacacacgtcga 1635 Query: 121 tcaacaccaacgcacgaacaagtaaaggcaaaagcgacaggaactgaagtaagaacatgc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1634 tcaacaccaacgcacgaacaagtaaaggcaaaagcgacaggaactgaagtaagaacatgc 1575 Query: 181 acgaacggattaagcgtcttatttttggatgtactttggaagcctcctcctctcctccac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1574 acgaacggattaagcgtcttatttttggatgtactttggaagcctcctcctctcctccac 1515 Query: 241 ggtggcacggacgatccttcagacgttgatgggcaggggctcgccgttccactccttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1514 ggtggcacggacgatccttcagacgttgatgggcaggggctcgccgttccactccttgag 1455 Query: 301 gcactcgagcatggggtcgatgagcttgttctggctgatgccgaggaagaccttggtgca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1454 gcactcgagcatggggtcgatgagcttgttctggctgatgccgaggaagaccttggtgca 1395 Query: 361 ttcctcgccgggggacagcagcttctcgccggtgaggtacacgcagccgagctcctcgcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 ttcctcgccgggggacagcagcttctcgccggtgaggtacacgcagccgagctcctcgcg 1335 Query: 421 gacgaagcggtacagcgggaacgacctgctc 451 ||||||||||||||||||||||||||||||| Sbjct: 1334 gacgaagcggtacagcgggaacgacctgctc 1304
>ref|XM_473192.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2124 Score = 262 bits (132), Expect = 9e-67 Identities = 171/184 (92%) Strand = Plus / Minus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2118 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 2059 Query: 328 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 387 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 2058 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 1999 Query: 388 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 447 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1998 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 1939 Query: 448 gctc 451 |||| Sbjct: 1938 gctc 1935
>gb|AY224546.1| Oryza sativa (japonica cultivar-group) isolate 24080 phenylalanine ammonia-lyase mRNA, complete cds Length = 2016 Score = 262 bits (132), Expect = 9e-67 Identities = 171/184 (92%) Strand = Plus / Minus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2010 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 1951 Query: 328 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 387 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 1950 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 1891 Query: 388 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 447 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1890 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 1831 Query: 448 gctc 451 |||| Sbjct: 1830 gctc 1827
>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02, complete sequence Length = 139080 Score = 262 bits (132), Expect = 9e-67 Identities = 171/184 (92%) Strand = Plus / Plus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 98032 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 98091 Query: 328 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 387 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 98092 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 98151 Query: 388 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 447 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98152 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 98211 Query: 448 gctc 451 |||| Sbjct: 98212 gctc 98215 Score = 107 bits (54), Expect = 3e-20 Identities = 150/182 (82%) Strand = Plus / Plus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 118218 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 118277 Query: 328 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 387 | |||| | ||| ||| ||| |||||| | ||||||||||| ||| || |||||| Sbjct: 118278 gccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctc 118337 Query: 388 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 447 ||||| | |||| | |||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 118338 cccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacct 118397 Query: 448 gc 449 || Sbjct: 118398 gc 118399
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 262 bits (132), Expect = 9e-67 Identities = 171/184 (92%) Strand = Plus / Plus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 25880622 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 25880681 Query: 328 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 387 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 25880682 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 25880741 Query: 388 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 447 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25880742 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 25880801 Query: 448 gctc 451 |||| Sbjct: 25880802 gctc 25880805 Score = 107 bits (54), Expect = 3e-20 Identities = 150/182 (82%) Strand = Plus / Plus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 25900808 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 25900867 Query: 328 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 387 | |||| | ||| ||| ||| |||||| | ||||||||||| ||| || |||||| Sbjct: 25900868 gccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctc 25900927 Query: 388 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 447 ||||| | |||| | |||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 25900928 cccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacct 25900987 Query: 448 gc 449 || Sbjct: 25900988 gc 25900989
>gb|AY973992.1| Bambusa ventricosa putative phenylalanine ammonia-lyase mRNA, complete cds Length = 2353 Score = 262 bits (132), Expect = 9e-67 Identities = 175/188 (93%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 265 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2104 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 2045 Query: 325 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 384 |||| |||||||||||||| ||| |||||| |||| ||||||||||||||| ||||| Sbjct: 2044 cttgccctggctgatgccgatgaacaccttgttgcactcctcgccgggggacttgagctt 1985 Query: 385 ctcgccggtgaggtacacgcagccgagct-cctcgcggacgaagcggtacagcgggaacg 443 ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 1984 ctcgccggtgaggtacacgcagccgagctccctcgcggacgaagcggtacacggggaacg 1925 Query: 444 acctgctc 451 ||| |||| Sbjct: 1924 accggctc 1917
>dbj|AK100346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082J11, full insert sequence Length = 2510 Score = 262 bits (132), Expect = 9e-67 Identities = 171/184 (92%) Strand = Plus / Minus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2210 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 2151 Query: 328 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 387 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 2150 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 2091 Query: 388 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 447 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2090 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 2031 Query: 448 gctc 451 |||| Sbjct: 2030 gctc 2027
>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13, complete sequence Length = 139226 Score = 262 bits (132), Expect = 9e-67 Identities = 171/184 (92%) Strand = Plus / Plus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 6884 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 6943 Query: 328 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 387 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 6944 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 7003 Query: 388 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 447 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7004 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 7063 Query: 448 gctc 451 |||| Sbjct: 7064 gctc 7067 Score = 107 bits (54), Expect = 3e-20 Identities = 150/182 (82%) Strand = Plus / Plus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 27070 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 27129 Query: 328 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 387 | |||| | ||| ||| ||| |||||| | ||||||||||| ||| || |||||| Sbjct: 27130 gccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctc 27189 Query: 388 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 447 ||||| | |||| | |||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 27190 cccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacct 27249 Query: 448 gc 449 || Sbjct: 27250 gc 27251
>ref|XM_466843.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2502 Score = 260 bits (131), Expect = 4e-66 Identities = 173/187 (92%) Strand = Plus / Minus Query: 265 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 324 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2189 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 2130 Query: 325 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 384 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 2129 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 2070 Query: 385 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2069 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 2010 Query: 445 cctgctc 451 || |||| Sbjct: 2009 ccggctc 2003
>emb|X16099.1|OSPAL Rice gene for phenylalanine ammonia-lyase (EC 4.3.1.5) Length = 4412 Score = 260 bits (131), Expect = 4e-66 Identities = 173/187 (92%) Strand = Plus / Minus Query: 265 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 324 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4066 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 4007 Query: 325 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 384 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 4006 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 3947 Query: 385 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 3946 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 3887 Query: 445 cctgctc 451 || |||| Sbjct: 3886 ccggctc 3880
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 260 bits (131), Expect = 4e-66 Identities = 173/187 (92%) Strand = Plus / Plus Query: 265 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 324 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 24992256 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 24992315 Query: 325 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 384 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 24992316 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 24992375 Query: 385 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 24992376 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 24992435 Query: 445 cctgctc 451 || |||| Sbjct: 24992436 ccggctc 24992442 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 328 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 25025228 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 25025284 Score = 81.8 bits (41), Expect = 2e-12 Identities = 140/173 (80%) Strand = Plus / Plus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 331 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 25004085 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 25004144 Query: 332 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 391 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 25004145 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 25004204 Query: 392 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| Sbjct: 25004205 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacga 25004257 Score = 79.8 bits (40), Expect = 7e-12 Identities = 136/168 (80%) Strand = Plus / Plus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||||||| ||||||||||||||||||| ||||| |||| || || ||| |||| Sbjct: 25011629 gatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaatgtgctt 25011688 Query: 328 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 387 | ||| ||||| ||| || |||||| | ||||||||||| ||| || |||||| Sbjct: 25011689 gccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctc 25011748 Query: 388 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacag 435 ||||||||||||| || |||||||||||||| || || |||||||| Sbjct: 25011749 gccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacag 25011796 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Plus Query: 407 ccgagctcctcgcggacgaagcggtacagcgggaacgacctgc 449 |||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct: 25025363 ccgagctcctcgcgcacgaaccggtagagcggatacgacctgc 25025405
>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0042D01 Length = 148305 Score = 260 bits (131), Expect = 4e-66 Identities = 173/187 (92%) Strand = Plus / Plus Query: 265 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 324 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5244 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 5303 Query: 325 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 384 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 5304 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 5363 Query: 385 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5364 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 5423 Query: 445 cctgctc 451 || |||| Sbjct: 5424 ccggctc 5430 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 328 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 38216 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 38272 Score = 81.8 bits (41), Expect = 2e-12 Identities = 140/173 (80%) Strand = Plus / Plus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 331 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 17073 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 17132 Query: 332 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 391 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 17133 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 17192 Query: 392 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| Sbjct: 17193 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacga 17245 Score = 79.8 bits (40), Expect = 7e-12 Identities = 136/168 (80%) Strand = Plus / Plus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||||||| ||||||||||||||||||| ||||| |||| || || ||| |||| Sbjct: 24617 gatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaatgtgctt 24676 Query: 328 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 387 | ||| ||||| ||| || |||||| | ||||||||||| ||| || |||||| Sbjct: 24677 gccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctc 24736 Query: 388 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacag 435 ||||||||||||| || |||||||||||||| || || |||||||| Sbjct: 24737 gccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacag 24784 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Plus Query: 407 ccgagctcctcgcggacgaagcggtacagcgggaacgacctgc 449 |||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct: 38351 ccgagctcctcgcgcacgaaccggtagagcggatacgacctgc 38393
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 260 bits (131), Expect = 4e-66 Identities = 173/187 (92%) Strand = Plus / Plus Query: 265 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 324 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 153539 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 153598 Query: 325 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 384 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 153599 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 153658 Query: 385 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 153659 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 153718 Query: 445 cctgctc 451 || |||| Sbjct: 153719 ccggctc 153725 Score = 81.8 bits (41), Expect = 2e-12 Identities = 140/173 (80%) Strand = Plus / Plus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 331 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 165368 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 165427 Query: 332 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 391 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 165428 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 165487 Query: 392 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| Sbjct: 165488 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacga 165540
>dbj|AK102817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N04, full insert sequence Length = 2504 Score = 260 bits (131), Expect = 4e-66 Identities = 173/187 (92%) Strand = Plus / Minus Query: 265 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 324 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2191 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 2132 Query: 325 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 384 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 2131 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 2072 Query: 385 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2071 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 2012 Query: 445 cctgctc 451 || |||| Sbjct: 2011 ccggctc 2005
>dbj|AK058306.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H03, full insert sequence Length = 1298 Score = 260 bits (131), Expect = 4e-66 Identities = 173/187 (92%) Strand = Plus / Minus Query: 265 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 324 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 983 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 924 Query: 325 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 384 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 923 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 864 Query: 385 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 863 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 804 Query: 445 cctgctc 451 || |||| Sbjct: 803 ccggctc 797
>dbj|AK067923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126B03, full insert sequence Length = 1531 Score = 252 bits (127), Expect = 9e-64 Identities = 172/187 (91%) Strand = Plus / Minus Query: 265 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 324 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1218 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 1159 Query: 325 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 384 |||| |||||||||||||||||| |||||| |||| ||| ||||||||||| ||||| Sbjct: 1158 cttgccctggctgatgccgaggaacaccttgttgcactccccgccgggggacttgagctt 1099 Query: 385 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1098 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 1039 Query: 445 cctgctc 451 || |||| Sbjct: 1038 ccggctc 1032
>gb|AY103647.1| Zea mays PCO142084 mRNA sequence Length = 2598 Score = 224 bits (113), Expect = 2e-55 Identities = 167/185 (90%) Strand = Plus / Minus Query: 262 gacgttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgat 321 ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| | Sbjct: 2215 gacgttgatgggcagcggcttgccgtcccactccttgaggcactcgagcatggggtccac 2156 Query: 322 gagcttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcag 381 ||||||| |||||||||||||| ||| |||||| |||| ||||||||||||||| || Sbjct: 2155 gagcttgccctggctgatgccgacgaacaccttgttgcactcctcgccgggggacttgag 2096 Query: 382 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 441 | |||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2095 cctctcgccggtcaggaacacgcagccgagctcctcgcgcacgaagcggtacagcgggaa 2036 Query: 442 cgacc 446 ||||| Sbjct: 2035 cgacc 2031
>gb|L77912.1|MZEPAL Zea mays phenylalanine ammonia-lyase mRNA, complete cds Length = 2488 Score = 218 bits (110), Expect = 1e-53 Identities = 164/182 (90%) Strand = Plus / Minus Query: 265 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 324 |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| | ||| Sbjct: 2216 gttgatgggcagcggcttgccgtcccactccttgaggcactcgagcatggggtccacgag 2157 Query: 325 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 384 |||| |||||||||||||| ||| |||||| |||| ||||||||||||||| ||| | Sbjct: 2156 cttgccctggctgatgccgacgaacaccttgttgcactcctcgccgggggacttgagcct 2097 Query: 385 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 ||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2096 ctcgccggtcaggaacacgcagccgagctcctcgcgcacgaagcggtacagcgggaacga 2037 Query: 445 cc 446 || Sbjct: 2036 cc 2035
>gb|M95077.1|MZEORFR Zea mays putative phenylalanine ammonia lyase mRNA, partial cds Length = 190 Score = 216 bits (109), Expect = 5e-53 Identities = 163/181 (90%) Strand = Plus / Minus Query: 262 gacgttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgat 321 ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| | Sbjct: 181 gacgttgatgggcagcggcttgccgtcccactccttgaggcactcgagcatggggtccac 122 Query: 322 gagcttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcag 381 ||||||| |||||||||||||| ||| |||||| |||| ||||||||||||||| || Sbjct: 121 gagcttgccctggctgatgccgacgaacaccttgttgcactcctcgccgggggacttgag 62 Query: 382 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 441 | |||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 61 cctctcgccggtcaggaacacgcagccgagctcctcgcgcacgaagcggtacagcgggaa 2 Query: 442 c 442 | Sbjct: 1 c 1
>gb|AY106831.1| Zea mays PCO142079 mRNA sequence Length = 2299 Score = 182 bits (92), Expect = 7e-43 Identities = 161/184 (87%) Strand = Plus / Minus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 |||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct: 1968 gatgggcaggggcttgccgtcccactccttgaggcagtcgagcatggggtcgatgagctt 1909 Query: 328 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 387 | || ||||| | | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 1908 gccctcgctgagggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 1849 Query: 388 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 447 |||||| ||||||||| |||||| |||| ||||| |||||||||||||||| |||||| Sbjct: 1848 gccggtcaggtacacggcgccgaggtcctggcggatgaagcggtacagcgggtacgaccg 1789 Query: 448 gctc 451 |||| Sbjct: 1788 gctc 1785
>ref|XM_475254.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2151 Score = 113 bits (57), Expect = 5e-22 Identities = 144/173 (83%) Strand = Plus / Minus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 331 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 2141 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccc 2082 Query: 332 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 391 ||| |||| ||| || |||||| || ||||||||||| ||| || |||||||||| Sbjct: 2081 tggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgtcttctcgccg 2022 Query: 392 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 |||||||| || ||||||||||||||| ||||| ||||| |||||| |||| Sbjct: 2021 gtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggtacga 1969
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 113 bits (57), Expect = 5e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 331 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 122631 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccc 122690 Query: 332 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 391 ||| |||| ||| || |||||| || ||||||||||| ||| || |||||||||| Sbjct: 122691 tggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgtcttctcgccg 122750 Query: 392 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 |||||||| || ||||||||||||||| ||||| ||||| |||||| |||| Sbjct: 122751 gtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggtacga 122803
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 113 bits (57), Expect = 5e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 331 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 65212 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccc 65271 Query: 332 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 391 ||| |||| ||| || |||||| || ||||||||||| ||| || |||||||||| Sbjct: 65272 tggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgtcttctcgccg 65331 Query: 392 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 |||||||| || ||||||||||||||| ||||| ||||| |||||| |||| Sbjct: 65332 gtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggtacga 65384
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 113 bits (57), Expect = 5e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 331 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 20809407 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccc 20809466 Query: 332 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 391 ||| |||| ||| || |||||| || ||||||||||| ||| || |||||||||| Sbjct: 20809467 tggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgtcttctcgccg 20809526 Query: 392 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 |||||||| || ||||||||||||||| ||||| ||||| |||||| |||| Sbjct: 20809527 gtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggtacga 20809579 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaatacaacgacaatatct 60 |||||||||||||||||||| Sbjct: 7843191 aaaatacaacgacaatatct 7843172
>ref|XM_473196.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2145 Score = 107 bits (54), Expect = 3e-20 Identities = 150/182 (82%) Strand = Plus / Minus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 2139 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 2080 Query: 328 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 387 | |||| | ||| ||| ||| |||||| | ||||||||||| ||| || |||||| Sbjct: 2079 gccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctc 2020 Query: 388 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 447 ||||| | |||| | |||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 2019 cccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacct 1960 Query: 448 gc 449 || Sbjct: 1959 gc 1958
>dbj|AK067801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118I15, full insert sequence Length = 2551 Score = 107 bits (54), Expect = 3e-20 Identities = 150/182 (82%) Strand = Plus / Minus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 2264 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 2205 Query: 328 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 387 | |||| | ||| ||| ||| |||||| | ||||||||||| ||| || |||||| Sbjct: 2204 gccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctc 2145 Query: 388 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 447 ||||| | |||| | |||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 2144 cccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacct 2085 Query: 448 gc 449 || Sbjct: 2084 gc 2083
>gb|BT018802.1| Zea mays clone EL01N0529D05.d mRNA sequence Length = 1451 Score = 103 bits (52), Expect = 5e-19 Identities = 139/168 (82%) Strand = Plus / Minus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 331 ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 1116 ggcaggggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgcgc 1057 Query: 332 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 391 ||| ||||| | | || |||||| || ||||||||||||||| | |||||||| Sbjct: 1056 tggttgatggccacgagcaccttgttgagctcctcgccgggggacctggtcctctcgccg 997 Query: 392 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcggg 439 || |||||| || ||||| ||||||||| ||||| |||||||||||| Sbjct: 996 gtcaggtactcggtgccgacctcctcgcgcacgaaccggtacagcggg 949
>gb|AY104679.1| Zea mays PCO142078 mRNA sequence Length = 1864 Score = 95.6 bits (48), Expect = 1e-16 Identities = 138/168 (82%) Strand = Plus / Minus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 331 ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 1562 ggcaggggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgcgc 1503 Query: 332 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 391 ||| ||||| | | || |||||| || ||||||||||||||| | |||||||| Sbjct: 1502 tggttgatggccacgagcaccttgttgagctcctcgccgggggacctggtcctctcgccg 1443 Query: 392 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcggg 439 || |||||| || ||||| |||||||| ||||| |||||||||||| Sbjct: 1442 gtcaggtactcggtgccgacgtcctcgcgcacgaaccggtacagcggg 1395
>ref|XM_466849.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2407 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Minus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 328 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 2167 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 2111 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Minus Query: 407 ccgagctcctcgcggacgaagcggtacagcgggaacgacctgc 449 |||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct: 2032 ccgagctcctcgcgcacgaaccggtagagcggatacgacctgc 1990
>emb|X87946.1|OSDNAZB8 O.sativa ZB8 gene Length = 4660 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Minus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 328 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 4566 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 4510 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Minus Query: 407 ccgagctcctcgcggacgaagcggtacagcgggaacgacctgc 449 |||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct: 4431 ccgagctcctcgcgcacgaaccggtagagcggatacgacctgc 4389
>dbj|AK068993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001A06, full insert sequence Length = 2406 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Minus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 328 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 2166 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 2110 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Minus Query: 407 ccgagctcctcgcggacgaagcggtacagcgggaacgacctgc 449 |||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct: 2031 ccgagctcctcgcgcacgaaccggtagagcggatacgacctgc 1989
>gb|AY450643.1| Bambusa oldhamii phenylalanine ammonia-lyase (PAL1) mRNA, complete cds Length = 2139 Score = 87.7 bits (44), Expect = 3e-14 Identities = 137/168 (81%) Strand = Plus / Minus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||| ||||||||||||||||||||||||||||| |||| ||||| ||| |||| Sbjct: 2133 gatgggcagtggctcgccgttccactccttgaggcactcaagcagcgggtcaatgtgctt 2074 Query: 328 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 387 | |||| ||||| |||||| |||||| | |||||||| || ||| | |||||| Sbjct: 2073 gccctggttgatggcgaggagcaccttgttcagctcctcgcccggcgaccgtgtcttctc 2014 Query: 388 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacag 435 ||||||||||||| | |||||||||||||| || || |||||||| Sbjct: 2013 gccggtgaggtactccgtcccgagctcctcgcgtacaaaccggtacag 1966
>ref|XM_466845.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2369 Score = 81.8 bits (41), Expect = 2e-12 Identities = 140/173 (80%) Strand = Plus / Minus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 331 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 2296 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 2237 Query: 332 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 391 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 2236 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 2177 Query: 392 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| Sbjct: 2176 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacga 2124
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 16320140 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 16320199 Query: 328 g 328 | Sbjct: 16320200 g 16320200 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 382 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 441 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 20335822 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 20335763 Query: 442 cga 444 ||| Sbjct: 20335762 cga 20335760 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 ataattcaccccaaaatacaacga 52 ||||||||||||||| |||||||| Sbjct: 10527685 ataattcaccccaaattacaacga 10527708
>gb|AY005474.1| Triticum aestivum inducible phenylalanine ammonia-lyase mRNA, partial cds Length = 1933 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 328 ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||| Sbjct: 1625 ggcaggggctcgccgttccactccttgaggcactccagcagcgggtcgatgtgcttg 1569
>dbj|AK120127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026F02, full insert sequence Length = 2594 Score = 81.8 bits (41), Expect = 2e-12 Identities = 140/173 (80%) Strand = Plus / Minus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 331 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 2296 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 2237 Query: 332 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 391 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 2236 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 2177 Query: 392 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| Sbjct: 2176 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacga 2124
>emb|Z15085.1|OSGP28G O.sativa GP28 gene (partial) Length = 4843 Score = 81.8 bits (41), Expect = 2e-12 Identities = 140/173 (80%) Strand = Plus / Minus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 331 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 4725 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 4666 Query: 332 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 391 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 4665 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 4606 Query: 392 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| Sbjct: 4605 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacga 4553
>dbj|AK065208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F15, full insert sequence Length = 1835 Score = 81.8 bits (41), Expect = 2e-12 Identities = 140/173 (80%) Strand = Plus / Minus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 331 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 1537 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 1478 Query: 332 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 391 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 1477 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 1418 Query: 392 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| Sbjct: 1417 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacga 1365
>dbj|AK061959.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G01, full insert sequence Length = 1589 Score = 81.8 bits (41), Expect = 2e-12 Identities = 140/173 (80%) Strand = Plus / Minus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 331 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 1253 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 1194 Query: 332 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 391 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 1193 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 1134 Query: 392 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 444 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| Sbjct: 1133 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacga 1081
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 16273373 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 16273432 Query: 328 g 328 | Sbjct: 16273433 g 16273433 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 382 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 441 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 20262036 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 20261977 Query: 442 cga 444 ||| Sbjct: 20261976 cga 20261974 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 ataattcaccccaaaatacaacga 52 ||||||||||||||| |||||||| Sbjct: 10527567 ataattcaccccaaattacaacga 10527590
>emb|AL732380.4|CNS08C93 Oryza sativa chromosome 12, . BAC OSJNBb0119N22 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 79613 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 67191 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 67250 Query: 328 g 328 | Sbjct: 67251 g 67251
>ref|XM_466846.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2142 Score = 79.8 bits (40), Expect = 7e-12 Identities = 136/168 (80%) Strand = Plus / Minus Query: 268 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 327 ||||||||||||| ||||||||||||||||||| ||||| |||| || || ||| |||| Sbjct: 2136 gatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaatgtgctt 2077 Query: 328 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 387 | ||| ||||| ||| || |||||| | ||||||||||| ||| || |||||| Sbjct: 2076 gccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctc 2017 Query: 388 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacag 435 ||||||||||||| || |||||||||||||| || || |||||||| Sbjct: 2016 gccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacag 1969
>emb|X99705.1|TAPALGEN1 T.aestivum PAL gene Length = 3444 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 328 ||||||||||||||||||||||||||||||||||| |||| | ||||||| ||||| Sbjct: 3097 ggcaggggctcgccgttccactccttgaggcactccagcagcgcgtcgatgtgcttg 3041
>emb|X99725.1|TAPALGEN2 T.aestivum PAL gene, coding region Length = 1419 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagca 311 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 1011 ggcaggggctcgccgttccactccttgaggcactcaagca 972
>gb|L11883.1|WHTWALI4A Triticum aestivum phenylalanine ammonia-lyase (wali4) mRNA, 3' end, partial cds Length = 634 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 275 aggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 328 |||||||||||||||||||||||||| ||||| |||| | ||||||| ||||| Sbjct: 376 aggggctcgccgttccactccttgagacactccagcagcgcgtcgatgtgcttg 323
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 382 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 441 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 110514 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 110455 Query: 442 cga 444 ||| Sbjct: 110454 cga 110452
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 382 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 441 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 28380582 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 28380523 Query: 442 cga 444 ||| Sbjct: 28380522 cga 28380520
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 382 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 441 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 28363031 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 28362972 Query: 442 cga 444 ||| Sbjct: 28362971 cga 28362969
>emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa0050D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 185820 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 382 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 441 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 175879 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 175938 Query: 442 cga 444 ||| Sbjct: 175939 cga 175941
>emb|X99483.1|HVPAL6 H.vulgare mRNA for phenylalanine ammonia-lyase, pal6 Length = 1251 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 272 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 328 ||||| |||||||| ||||||||||||||||| || |||| | ||||||| ||||| Sbjct: 1046 ggcagaggctcgccattccactccttgaggcattccagcagcgcgtcgatgtgcttg 990
>emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1670 bp) Length = 1670 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Minus Query: 272 ggcaggggctcgccgttccactccttgaggcactc 306 ||||||||||| || ||||||||||| |||||||| Sbjct: 1420 ggcaggggctcaccattccactccttcaggcactc 1386
>ref|XR_005088.1| PREDICTED: Mus musculus hypothetical protein LOC677558 (LOC677558), mRNA Length = 1008 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 atttttggatgtactttggaa 221 ||||||||||||||||||||| Sbjct: 951 atttttggatgtactttggaa 971
>ref|XR_004983.1| PREDICTED: Mus musculus similar to preferentially expressed antigen in melanoma like 5 (LOC676880), mRNA Length = 1639 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 atttttggatgtactttggaa 221 ||||||||||||||||||||| Sbjct: 1582 atttttggatgtactttggaa 1602
>ref|XM_112266.6| PREDICTED: Mus musculus similar to preferentially expressed antigen in melanoma like 5 (LOC195555), mRNA Length = 1636 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 atttttggatgtactttggaa 221 ||||||||||||||||||||| Sbjct: 1579 atttttggatgtactttggaa 1599
>ref|XM_205435.6| PREDICTED: Mus musculus similar to preferentially expressed antigen in melanoma like 5 (LOC279185), mRNA Length = 1636 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 atttttggatgtactttggaa 221 ||||||||||||||||||||| Sbjct: 1579 atttttggatgtactttggaa 1599
>gb|AC129623.4| Homo sapiens 12 BAC CTD-2107C6 (Cal Tech Human BAC Library D) complete sequence Length = 133581 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 attagcataattcaccccaaaatac 47 ||||||||| ||||||||||||||| Sbjct: 78789 attagcatatttcaccccaaaatac 78765
>emb|BX005100.9| Mouse DNA sequence from clone RP23-76P22 on chromosome 11 Contains part of the gene for a novel protein (C230094A16Rik), the gene for a novel protein (4931440F15Rik) similar to Mus musculus feminization 1 homolog a (C. elegans) (Fem1a), a ribosomal protein L23 (Rpl23) pseudogene, a preferentially expressed antigen in melanoma like 5 (Pramel5) pseudogene and a CpG island, complete sequence Length = 193116 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 atttttggatgtactttggaa 221 ||||||||||||||||||||| Sbjct: 174370 atttttggatgtactttggaa 174390
>gb|AC074237.4| Homo sapiens chromosome 18, clone RP11-333K18, complete sequence Length = 181390 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 attagcataattcaccccaaaatac 47 ||||||||| ||||||||||||||| Sbjct: 53072 attagcatatttcaccccaaaatac 53048
>gb|AY036011.1| Manihot esculenta phenylalanine ammonia-lyase 1 (PAL1) mRNA, complete cds Length = 2253 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 287 ttccactccttgaggcactcgagcatggg 315 ||||||||||||||||| || |||||||| Sbjct: 2185 ttccactccttgaggcattcaagcatggg 2157
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 ggaagcctcctcctctcctcc 238 ||||||||||||||||||||| Sbjct: 7993897 ggaagcctcctcctctcctcc 7993917
>dbj|AP006235.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017N10 Length = 168535 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 ggaagcctcctcctctcctcc 238 ||||||||||||||||||||| Sbjct: 106540 ggaagcctcctcctctcctcc 106560
>dbj|AP005876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0092O08 Length = 145596 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 ggaagcctcctcctctcctcc 238 ||||||||||||||||||||| Sbjct: 9002 ggaagcctcctcctctcctcc 9022
>gb|AC116769.11| Mus musculus chromosome 15, clone RP23-415L16, complete sequence Length = 201535 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 actttggaagcctcctcctct 233 ||||||||||||||||||||| Sbjct: 44602 actttggaagcctcctcctct 44582
>gb|AY098511.1| Ananas comosus phenylalanine ammonia-lyase mRNA, partial cds Length = 1110 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 287 ttccactccttgaggcactcgagcatggg 315 ||||||||||| | ||||||||||||||| Sbjct: 864 ttccactccttcaagcactcgagcatggg 836
>emb|AL626771.9| Mouse DNA sequence from clone RP23-281O10 on chromosome 4, complete sequence Length = 185594 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 atttttggatgtactttggaa 221 ||||||||||||||||||||| Sbjct: 42223 atttttggatgtactttggaa 42243
>emb|AL713865.10| Mouse DNA sequence from clone RP23-451D4 on chromosome 4, complete sequence Length = 172962 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 atttttggatgtactttggaa 221 ||||||||||||||||||||| Sbjct: 147699 atttttggatgtactttggaa 147719 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 atttttggatgtactttggaa 221 ||||||||||||||||||||| Sbjct: 36754 atttttggatgtactttggaa 36774
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaatacaacgacaatatct 60 |||||||||||||||||||| Sbjct: 120777 aaaatacaacgacaatatct 120758
>ref|XM_363465.1| Magnaporthe grisea 70-15 hypothetical protein (MG01391.4) partial mRNA Length = 1518 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 agccgagctcctcgcggacg 424 |||||||||||||||||||| Sbjct: 436 agccgagctcctcgcggacg 417
>ref|XM_613576.2| PREDICTED: Bos taurus similar to inhibitor of Brutons tyrosine kinase, transcript variant 1 (LOC540885), mRNA Length = 4959 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 agcaaaaaagaagccacgta 20 |||||||||||||||||||| Sbjct: 3470 agcaaaaaagaagccacgta 3489
>ref|XM_872425.1| PREDICTED: Bos taurus similar to inhibitor of Brutons tyrosine kinase, transcript variant 2 (LOC540885), mRNA Length = 4758 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 agcaaaaaagaagccacgta 20 |||||||||||||||||||| Sbjct: 3269 agcaaaaaagaagccacgta 3288
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gcattcctcgccgggggacagcag 381 |||| ||||||||||||||||||| Sbjct: 1008707 gcatacctcgccgggggacagcag 1008730
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaatacaacgacaatatct 60 |||||||||||||||||||| Sbjct: 27966 aaaatacaacgacaatatct 27947
>gb|AC099342.5| Homo sapiens BAC clone RP11-323F6 from 7, complete sequence Length = 29752 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 taattcaccccaaaatacaa 49 |||||||||||||||||||| Sbjct: 1408 taattcaccccaaaatacaa 1427
>gb|AC005083.1| Homo sapiens BAC clone CTA-281G5 from 7, complete sequence Length = 146285 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 taattcaccccaaaatacaa 49 |||||||||||||||||||| Sbjct: 593 taattcaccccaaaatacaa 574
>emb|AL596223.3| Human DNA sequence from clone RP11-227H15 on chromosome 10 Contains 3' end of the VPS26 gene for vacuolar protein sorting 26 (yeast) (HB58, Hbeta58, FLJ12930), the SUPV3L1 gene for suppressor of var1, 3-like 1 (S. cerevisiae)(SUV3), the gene for a novel hexokinase domain containing protein (FLJ37767), the 5' end of the HK1 gene for hexokinase 1 (HKI, HXK1), two novel genes, a ribosomal protein S15a (RPS15A) pseudogene and two CpG islands, complete sequence Length = 180548 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cataattcaccccaaaatac 47 |||||||||||||||||||| Sbjct: 144030 cataattcaccccaaaatac 144011
>emb|BX005068.13| Zebrafish DNA sequence from clone DKEY-40H17 in linkage group 1, complete sequence Length = 215007 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 taattcaccccaaaatacaa 49 |||||||||||||||||||| Sbjct: 183379 taattcaccccaaaatacaa 183360
>emb|BX005425.12| Zebrafish DNA sequence from clone DKEY-7O6 in linkage group 8, complete sequence Length = 252440 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 taagcgtcttatttttggat 210 |||||||||||||||||||| Sbjct: 198253 taagcgtcttatttttggat 198234
>gb|AC048352.18| Homo sapiens 12 BAC RP11-871F6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 216792 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tagtattagcataattcacc 38 |||||||||||||||||||| Sbjct: 141811 tagtattagcataattcacc 141830
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 gatgccgaggaagaccttgg 356 |||||||||||||||||||| Sbjct: 1290667 gatgccgaggaagaccttgg 1290648
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 acagcgggaacgacctgctc 451 |||||||||||||||||||| Sbjct: 1761401 acagcgggaacgacctgctc 1761382
>gb|AC006034.2|AC006034 Homo sapiens BAC clone RP11-144M13 from 7p11.2-p21, complete sequence Length = 56479 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 taattcaccccaaaatacaa 49 |||||||||||||||||||| Sbjct: 26527 taattcaccccaaaatacaa 26508
>gb|AY850327.1| Magnaporthe grisea cytochrome P450-like protein mRNA, complete cds Length = 2006 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 agccgagctcctcgcggacg 424 |||||||||||||||||||| Sbjct: 484 agccgagctcctcgcggacg 465
>emb|AL772421.5|CNS08C9Z Oryza sativa chromosome 12, . BAC OJ1007_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130672 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 ataattcaccccaaaatacaacga 52 ||||||||||||||| |||||||| Sbjct: 53491 ataattcaccccaaattacaacga 53514 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,468,601 Number of Sequences: 3902068 Number of extensions: 3468601 Number of successful extensions: 74932 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74216 Number of HSP's gapped (non-prelim): 710 length of query: 451 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 429 effective length of database: 17,147,199,772 effective search space: 7356148702188 effective search space used: 7356148702188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
