>gb|AY106551.1| Zea mays PCO136206 mRNA sequence
          Length = 579

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                       
Query: 251 tcattgcaagaagtacccggaaaggaagaaggcgaacccgacaaggaggcttccgtagat 310
           |||||||| |||||| ||||| | |||||||  ||| ||||  |||||||| ||||||||
Sbjct: 262 tcattgcaggaagtagccggagatgaagaagaggaagccgatgaggaggctaccgtagat 203

                                      
Query: 311 gagtagcgtcttctggccggaggtgag 337
           ||| ||   ||||||||||||||||||
Sbjct: 202 gagcaggcccttctggccggaggtgag 176

>ref|XM_481606.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 924

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 251 tcattgcaagaagtacccggaaaggaagaaggcgaacccgacaaggaggcttccgtagat 310
           |||||| | |||||| ||||| |||||||||  ||| ||||| |||||||| ||||||||
Sbjct: 818 tcattggaggaagtagccggagaggaagaagaggaagccgacgaggaggctgccgtagat 759

                   
Query: 311 gagtagcg 318
           ||| ||||
Sbjct: 758 gagcagcg 751

>ref|XM_507192.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0078D03.13
           mRNA
          Length = 958

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 251 tcattgcaagaagtacccggaaaggaagaaggcgaacccgacaaggaggcttccgtagat 310
           |||||| | |||||| ||||| |||||||||  ||| ||||| |||||||| ||||||||
Sbjct: 834 tcattggaggaagtagccggagaggaagaagaggaagccgacgaggaggctgccgtagat 775

                   
Query: 311 gagtagcg 318
           ||| ||||
Sbjct: 774 gagcagcg 767

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                            
Query: 251      tcattgcaagaagtacccggaaaggaagaaggcgaacccgacaaggaggcttccgtagat 310
                |||||| | |||||| ||||| |||||||||  ||| ||||| |||||||| ||||||||
Sbjct: 14150787 tcattggaggaagtagccggagaggaagaagaggaagccgacgaggaggctgccgtagat 14150846

                        
Query: 311      gagtagcg 318
                ||| ||||
Sbjct: 14150847 gagcagcg 14150854

>dbj|AP005493.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0078D03
          Length = 176593

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                         
Query: 251   tcattgcaagaagtacccggaaaggaagaaggcgaacccgacaaggaggcttccgtagat 310
             |||||| | |||||| ||||| |||||||||  ||| ||||| |||||||| ||||||||
Sbjct: 55076 tcattggaggaagtagccggagaggaagaagaggaagccgacgaggaggctgccgtagat 55135

                     
Query: 311   gagtagcg 318
             ||| ||||
Sbjct: 55136 gagcagcg 55143

>dbj|AK120326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057O12, full
           insert sequence
          Length = 896

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 251 tcattgcaagaagtacccggaaaggaagaaggcgaacccgacaaggaggcttccgtagat 310
           |||||| | |||||| ||||| |||||||||  ||| ||||| |||||||| ||||||||
Sbjct: 419 tcattggaggaagtagccggagaggaagaagaggaagccgacgaggaggctgccgtagat 360

                   
Query: 311 gagtagcg 318
           ||| ||||
Sbjct: 359 gagcagcg 352

>dbj|AK104226.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H08, full
           insert sequence
          Length = 924

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 251 tcattgcaagaagtacccggaaaggaagaaggcgaacccgacaaggaggcttccgtagat 310
           |||||| | |||||| ||||| |||||||||  ||| ||||| |||||||| ||||||||
Sbjct: 818 tcattggaggaagtagccggagaggaagaagaggaagccgacgaggaggctgccgtagat 759

                   
Query: 311 gagtagcg 318
           ||| ||||
Sbjct: 758 gagcagcg 751

>dbj|AK068722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013165B12, full
           insert sequence
          Length = 958

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 251 tcattgcaagaagtacccggaaaggaagaaggcgaacccgacaaggaggcttccgtagat 310
           |||||| | |||||| ||||| |||||||||  ||| ||||| |||||||| ||||||||
Sbjct: 834 tcattggaggaagtagccggagaggaagaagaggaagccgacgaggaggctgccgtagat 775

                   
Query: 311 gagtagcg 318
           ||| ||||
Sbjct: 774 gagcagcg 767

>gb|AC145324.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026D03
              map near S2137, complete sequence
          Length = 115141

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 272    aaggaagaaggcgaacccgaca 293
              ||||||||||||||||||||||
Sbjct: 105784 aaggaagaaggcgaacccgaca 105763



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 272   aaggaagaaggcgaacccgaca 293
             ||||||||||||||||||||||
Sbjct: 67248 aaggaagaaggcgaacccgaca 67227

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 272     aaggaagaaggcgaacccgaca 293
               ||||||||||||||||||||||
Sbjct: 8265152 aaggaagaaggcgaacccgaca 8265173



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 272     aaggaagaaggcgaacccgaca 293
               ||||||||||||||||||||||
Sbjct: 8226616 aaggaagaaggcgaacccgaca 8226637

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 272     aaggaagaaggcgaacccgaca 293
               ||||||||||||||||||||||
Sbjct: 8335915 aaggaagaaggcgaacccgaca 8335936



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 272     aaggaagaaggcgaacccgaca 293
               ||||||||||||||||||||||
Sbjct: 8297379 aaggaagaaggcgaacccgaca 8297400

>emb|AL596210.20| Human DNA sequence from clone RP11-92O17 on chromosome 1 Contains part
             of the CAMTA1 gene for calmodulin binding transcription
             activator 1, complete sequence
          Length = 107112

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    cccctctctctctgggctctt 102
             |||||||||||||||||||||
Sbjct: 37066 cccctctctctctgggctctt 37046

>gb|AC154909.4| Mus musculus BAC clone RP23-185B22 from chromosome 8, complete sequence
          Length = 195479

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                               
Query: 120    gtatctatacacacaa-atttagtacagtactt 151
              |||||||||||||||| |||| |||||||||||
Sbjct: 191616 gtatctatacacacaacattttgtacagtactt 191584

>gb|AC114920.7| Mus musculus BAC clone RP23-197N18 from 8, complete sequence
          Length = 195042

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                              
Query: 120   gtatctatacacacaa-atttagtacagtactt 151
             |||||||||||||||| |||| |||||||||||
Sbjct: 69847 gtatctatacacacaacattttgtacagtactt 69815

>ref|NM_184640.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1191

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 272  aaggaagaaggcgaacccga 291
            ||||||||||||||||||||
Sbjct: 1056 aaggaagaaggcgaacccga 1075

>ref|NM_195681.1| Oryza sativa (japonica cultivar-group) putative retroelement
            (OSJNBa0004A10.2), mRNA
          Length = 4104

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 272  aaggaagaaggcgaacccga 291
            ||||||||||||||||||||
Sbjct: 3936 aaggaagaaggcgaacccga 3955

>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome
          Length = 920079

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 179    cttagtttctcctcttcactaatt 202
              ||||||||||||||||| ||||||
Sbjct: 210102 cttagtttctcctcttcgctaatt 210079

>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome
          Length = 897405

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 179    cttagtttctcctcttcactaatt 202
              ||||||||||||||||| ||||||
Sbjct: 202677 cttagtttctcctcttcgctaatt 202654

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 272      aaggaagaaggcgaacccga 291
                ||||||||||||||||||||
Sbjct: 18560962 aaggaagaaggcgaacccga 18560943

>emb|BX908796.11| Zebrafish DNA sequence from clone CH211-198E20 in linkage group 15,
             complete sequence
          Length = 204627

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   gaatgaatcaaaggatgatg 237
             ||||||||||||||||||||
Sbjct: 74287 gaatgaatcaaaggatgatg 74306

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 273     aggaagaaggcgaacccgac 292
               ||||||||||||||||||||
Sbjct: 2045868 aggaagaaggcgaacccgac 2045849

>gb|AC011495.8| Homo sapiens chromosome 19 clone CTB-33G10, complete sequence
          Length = 209844

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    cccctctctctctgggctct 101
             ||||||||||||||||||||
Sbjct: 40952 cccctctctctctgggctct 40933

>gb|AC009729.14| Homo sapiens 12 BAC RP11-1K3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 167234

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 135    aatttagtacagtacttatcaagattaa 162
              ||||||| |||||| |||||||||||||
Sbjct: 113495 aatttagcacagtatttatcaagattaa 113468

>gb|AC098682.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBa0004A10, from chromosome 10, complete sequence
          Length = 144271

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 272  aaggaagaaggcgaacccga 291
            ||||||||||||||||||||
Sbjct: 6079 aaggaagaaggcgaacccga 6060

>gb|AC093180.12| Oryza sativa chromosome 3 BAC OJ1004_D04 genomic sequence, complete
             sequence
          Length = 158170

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   aaggaagaaggcgaacccga 291
             ||||||||||||||||||||
Sbjct: 76715 aaggaagaaggcgaacccga 76734

>gb|AC112031.4| Rattus norvegicus  BAC CH230-99K18 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 242158

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     ctctctctgggctcttggta 106
              ||||||||||||||||||||
Sbjct: 198438 ctctctctgggctcttggta 198419

>gb|AC074354.8|AC074354 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0065C16, from Chromosome 10, complete sequence
          Length = 146391

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   aaggaagaaggcgaacccga 291
             ||||||||||||||||||||
Sbjct: 95623 aaggaagaaggcgaacccga 95604

>gb|AC155333.5| Mus musculus 6 BAC RP24-475M8 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 189462

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    caaaacaaatgtcccatttc 64
             ||||||||||||||||||||
Sbjct: 43410 caaaacaaatgtcccatttc 43429

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 272     aaggaagaaggcgaacccga 291
               ||||||||||||||||||||
Sbjct: 6133498 aaggaagaaggcgaacccga 6133479

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 272     aaggaagaaggcgaacccga 291
               ||||||||||||||||||||
Sbjct: 8425167 aaggaagaaggcgaacccga 8425186

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 272     aaggaagaaggcgaacccga 291
               ||||||||||||||||||||
Sbjct: 2519651 aaggaagaaggcgaacccga 2519632

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 272      aaggaagaaggcgaacccga 291
                ||||||||||||||||||||
Sbjct: 18555003 aaggaagaaggcgaacccga 18554984

>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0406E03
          Length = 201069

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    aaggaagaaggcgaacccga 291
              ||||||||||||||||||||
Sbjct: 106241 aaggaagaaggcgaacccga 106222

>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome
          Length = 892758

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 179    cttagtttctcctcttcactaatt 202
              ||||||||||||||||| ||||||
Sbjct: 239276 cttagtttctcctcttcgctaatt 239299

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 272     aaggaagaaggcgaacccga 291
               ||||||||||||||||||||
Sbjct: 8430266 aaggaagaaggcgaacccga 8430285

>gb|AF038556.1|AF038556 Pneumocystis carinii f. sp. hominis variant regions of major surface
            glycoproteins (msg1, msg3, msg4) genes, partial cds
          Length = 12792

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 141  gtacagtacttatcaagatt 160
            ||||||||||||||||||||
Sbjct: 2835 gtacagtacttatcaagatt 2816

>emb|AL606997.3|OSJN00115 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0059D20,
             complete sequence
          Length = 147108

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   aaggaagaaggcgaacccga 291
             ||||||||||||||||||||
Sbjct: 29283 aaggaagaaggcgaacccga 29264


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,470,018
Number of Sequences: 3902068
Number of extensions: 3470018
Number of successful extensions: 63671
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 63428
Number of HSP's gapped (non-prelim): 245
length of query: 338
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 316
effective length of database: 17,147,199,772
effective search space: 5418515127952
effective search space used: 5418515127952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)