>RISB_CLOAB (Q97LG8) 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) (DMRL|
           synthase) (Lumazine synthase) (Riboflavin synthase beta
           chain)
          Length = 155

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 448 SLQLAVAPKTFCAPSISTRFVSSGKYLLLLCSG 350
           S++LA AP  F  P IS +   SGKY  ++C G
Sbjct: 47  SIELAWAPGAFEIPLISQKMAESGKYDAVICLG 79

>CAPP_MYCPA (P61449) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 935

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +2

Query: 302 IYRGLLHTIIYRCLLHTRAQEQEILARRNEPCRNGGRAESLWCYSQLE 445
           I   +L   +YR L+  R Q QE++   ++  ++GG   S W   + E
Sbjct: 561 ILHAMLELPLYRALVAARGQSQEVMLGYSDSNKDGGYLASSWAVYRAE 608

>CAPP_NEIG1 (Q5F5A9) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 900

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 332 YRCLLHTRAQEQEILARRNEPCRNGGRAESLWCYSQLE 445
           Y  LL +R   QEI+   ++  ++GG   S WC  Q E
Sbjct: 546 YDALLESRGNIQEIMLGYSDSNKDGGYVTSSWCLHQAE 583

>CAPP_NEIMB (Q9JXG5) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 900

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 332 YRCLLHTRAQEQEILARRNEPCRNGGRAESLWCYSQLE 445
           Y  LL +R   QEI+   ++  ++GG   S WC  Q E
Sbjct: 546 YDALLESRGNIQEIMLGYSDSNKDGGYVTSSWCLYQAE 583

>CAPP_NEIMA (Q9JWH1) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 900

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 332 YRCLLHTRAQEQEILARRNEPCRNGGRAESLWCYSQLE 445
           Y  LL +R   QEI+   ++  ++GG   S WC  Q E
Sbjct: 546 YGALLESRGNIQEIMLGYSDSNKDGGYVTSSWCLYQAE 583

>PO21_POPJA (Q03273) Retrovirus-related Pol polyprotein from type-1|
           retrotransposable element R2 (Retrovirus-related Pol
           polyprotein from type I retrotransposable element R2)
           [Includes: Reverse transcriptase (EC 2.7.7.49);
           Endonuclease] (Fragment)
          Length = 445

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
 Frame = +1

Query: 307 PRPSSHNHIPLPSSHQSTGAGDTCQTKR-TVSKWRARRK----------SLVLQPAGAT 450
           PRP+ H+H P P   Q+T    T Q+ R  +S  R +RK          SL   PAGAT
Sbjct: 381 PRPA-HHHQPRPPEGQATANTGTLQSGRPALSHSRKKRKRQLTPTQRAPSLASPPAGAT 438


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,492,724
Number of Sequences: 219361
Number of extensions: 1352068
Number of successful extensions: 3124
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3122
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)