ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet117f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC142505.1| Solanum demissum chromosome 5 BAC PGEC287I17 geno... 44 0.42
2gb|AC119905.11| Mus musculus chromosome 17, clone RP24-238N14, c... 44 0.42
3gb|AC135356.2| Mus musculus BAC clone RP24-545J19 from chromosom... 44 0.42
4gb|AC154750.2| Mus musculus BAC clone RP24-399I16 from chromosom... 44 0.42
5gb|AC006680.1| Caenorhabditis elegans cosmid R13D7, complete seq... 44 0.42
6ref|NM_072496.1| Caenorhabditis elegans Serpentine Receptor, cla... 44 0.42
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
8emb|AL954308.12| Zebrafish DNA sequence from clone DKEY-13J15 in... 44 0.42
9dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
10dbj|AP002801.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 44 0.42
11ref|XM_635234.1| Dictyostelium discoideum phosphotyrosine phosph... 42 1.6
12gb|AE014825.1| Plasmodium falciparum 3D7 chromosome 14 section 1... 42 1.6
13gb|AC073968.8| Homo sapiens BAC clone RP11-111G20 from 7, comple... 42 1.6
14gb|AC145090.1| Pan troglodytes BAC clone RP43-2G11 from 7, compl... 42 1.6
15gb|AC165148.2| Mus musculus BAC clone RP24-278K24 from chromosom... 42 1.6
16gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequ... 42 1.6
17emb|BX284112.25| Zebrafish DNA sequence from clone DKEYP-75A7 in... 42 1.6
18gb|AC151987.4| Mus musculus BAC clone RP23-356C20 from chromosom... 42 1.6
19emb|AL929345.15| Zebrafish DNA sequence from clone DKEY-211H10 i... 42 1.6
20emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 42 1.6
21emb|AL954838.14| Zebrafish DNA sequence from clone DKEY-12B15 in... 42 1.6
22gb|U38197.1|DDU38197 Dictyostelium discoideum protein tyrosine p... 42 1.6
23emb|CT030233.6| Mouse DNA sequence from clone RP24-103C16 on chr... 42 1.6
24gb|AC160994.5| Mus musculus BAC clone RP23-101K11 from chromosom... 42 1.6
25ref|NM_123919.3| Arabidopsis thaliana unknown protein AT5G45510 ... 40 6.5
26gb|AC111034.11| Mus musculus chromosome 8, clone RP23-202K1, com... 40 6.5
27ref|XM_640002.1| Dictyostelium discoideum hypothetical protein (... 40 6.5
28ref|XM_634213.1| Dictyostelium discoideum histidine kinase (DDB0... 40 6.5
29ref|XM_630646.1| Dictyostelium discoideum hypothetical protein (... 40 6.5
30gb|AC165948.2| Mus musculus BAC clone RP24-430M9 from chromosome... 40 6.5
31gb|AC121146.8| Mus musculus chromosome 3, clone RP24-297G3, comp... 40 6.5
32gb|AC139513.10| Mus musculus chromosome 15, clone RP23-151N6, co... 40 6.5
33gb|AC008367.5| Drosophila melanogaster clone BACR10P10, complete... 40 6.5
34gb|AC131594.10| Mus musculus chromosome 15, clone RP24-568P18, c... 40 6.5
35gb|AC115680.3| Dictyostelium discoideum chromosome 2 map 4915084... 40 6.5
36emb|CT009574.5| Mouse DNA sequence from clone RP23-140H11 on chr... 40 6.5
37emb|Z70211.1|CEK11E4 Caenorhabditis elegans Cosmid K11E4, comple... 40 6.5
38ref|XM_726172.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 6.5
39gb|AC163214.4| Mus musculus chromosome 5, clone RP23-467O1, comp... 40 6.5
40gb|AC166313.2| Medicago truncatula chromosome 7 BAC clone mte1-4... 40 6.5
41emb|AL356118.15| Human DNA sequence from clone RP11-487A2 on chr... 40 6.5
42gb|AC113558.8| Homo sapiens chromosome 18, clone RP11-1130K19, c... 40 6.5
43gb|AC125503.3| Oryctolagus cuniculus clone LB1-115H21, complete ... 40 6.5
44emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS... 40 6.5
45emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS... 40 6.5
46emb|BX323462.11| Zebrafish DNA sequence from clone CH211-225F16 ... 40 6.5
47emb|CR385022.10| Zebrafish DNA sequence from clone CH211-63C12 i... 40 6.5
48gb|AC099689.4| Homo sapiens chromosome 18, clone RP11-849I19, co... 40 6.5
49emb|BX914218.21| Zebrafish DNA sequence from clone DKEY-80F1 in ... 40 6.5
50gb|AC093335.7| Homo sapiens chromosome 18, clone RP11-850O21, co... 40 6.5
51gb|AY102118.1| Arabidopsis thaliana AT5g45510/MFC19_18 mRNA sequ... 40 6.5
52gb|AF362373.2| Dictyostelium discoideum histidine kinase DhkL (d... 40 6.5
53gb|AC093914.3| Homo sapiens BAC clone RP11-779N9 from 4, complet... 40 6.5
54gb|AY065063.1| Arabidopsis thaliana AT5g45510/MFC19_18 mRNA, com... 40 6.5
55emb|BX890601.10| Zebrafish DNA sequence from clone CH211-51F19 i... 40 6.5
56gb|AC148762.2| Medicago truncatula chromosome 7 BAC clone mth2-1... 40 6.5
57gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold 40 6.5
58emb|CR391699.1| Gallus gallus finished cDNA, clone ChEST238k16 40 6.5
59emb|BX323593.12| Zebrafish DNA sequence from clone DKEY-107I18 i... 40 6.5
60gb|AC154441.3| Mus musculus BAC clone RP24-176O5 from chromosome... 40 6.5
61gb|AC008207.3|AC008207 Drosophila melanogaster, chromosome 3R, r... 40 6.5
62gb|AC008208.5|AC008208 Drosophila melanogaster, chromosome 3R, r... 40 6.5
63gb|AC009453.13|AC009453 Homo sapiens chromosome 18, clone RP11-5... 40 6.5
64gb|AC122152.3| Oryctolagus cuniculus clone LB1-297M16, complete ... 40 6.5
65gb|AC108171.3| Homo sapiens chromosome X clone RP11-468J11, RP11... 40 6.5
66gb|AF282854.4| Homo sapiens chromosome X clone RP11-157E12 map q... 40 6.5
67gb|AF274857.3| Homo sapiens chromosome X clone CTD-2011N23 map q... 40 6.5
68gb|AC016254.14|AC016254 Homo sapiens 12 BAC RP11-394C19 (Roswell... 40 6.5
69gb|AC151273.2| Mus musculus BAC clone RP24-237J7 from chromosome... 40 6.5
70dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.5
71dbj|AB018113.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.5
72gb|AE003751.3| Drosophila melanogaster chromosome 3R, section 89... 40 6.5
73emb|AL670689.7| Mouse DNA sequence from clone RP23-269N5 on chro... 40 6.5
74emb|AL732601.16| Mouse DNA sequence from clone RP23-154J12 on ch... 40 6.5
75gb|AC165951.3| Mus musculus BAC clone RP24-137B13 from chromosom... 40 6.5
76gb|AC116521.15| Mus musculus chromosome 5, clone RP24-343N10, co... 40 6.5
77gb|AC161865.4| Mus musculus chromosome 19, clone RP23-218F7, com... 40 6.5 
>gb|AC142505.1| Solanum demissum chromosome 5 BAC PGEC287I17 genomic sequence, complete
             sequence
          Length = 78626

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 37    atgtttgtatacaacatcaacaacat 62
             |||||||||||||||| |||||||||
Sbjct: 36867 atgtttgtatacaacaacaacaacat 36892
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>gb|AC119905.11| Mus musculus chromosome 17, clone RP24-238N14, complete sequence
          Length = 179042

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 47    acaacatcaacaacatcaatat 68
             ||||||||||||||||||||||
Sbjct: 58615 acaacatcaacaacatcaatat 58636
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>gb|AC135356.2| Mus musculus BAC clone RP24-545J19 from chromosome 17, complete sequence
          Length = 186773

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 47     acaacatcaacaacatcaatat 68
              ||||||||||||||||||||||
Sbjct: 185596 acaacatcaacaacatcaatat 185617
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>gb|AC154750.2| Mus musculus BAC clone RP24-399I16 from chromosome 17, complete
             sequence
          Length = 128778

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 47    acaacatcaacaacatcaatat 68
             ||||||||||||||||||||||
Sbjct: 23674 acaacatcaacaacatcaatat 23695
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>gb|AC006680.1| Caenorhabditis elegans cosmid R13D7, complete sequence
          Length = 21695

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 224   tttatttatatctatcttacaa 245
             ||||||||||||||||||||||
Sbjct: 16351 tttatttatatctatcttacaa 16330
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>ref|NM_072496.1| Caenorhabditis elegans Serpentine Receptor, class T family member
           (srt-6) (srt-6) mRNA, complete cds
          Length = 1068

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 224 tttatttatatctatcttacaa 245
           ||||||||||||||||||||||
Sbjct: 641 tttatttatatctatcttacaa 662
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 195     ctaatattaattaacacttcat 216
               ||||||||||||||||||||||
Sbjct: 9138196 ctaatattaattaacacttcat 9138217
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>emb|AL954308.12| Zebrafish DNA sequence from clone DKEY-13J15 in linkage group 4, complete
              sequence
          Length = 223608

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 31     atatatatgtttgtatacaaca 52
              ||||||||||||||||||||||
Sbjct: 189374 atatatatgtttgtatacaaca 189353
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>dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0662B01
          Length = 155913

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 195   ctaatattaattaacacttcat 216
             ||||||||||||||||||||||
Sbjct: 32218 ctaatattaattaacacttcat 32239
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>dbj|AP002801.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-875G18, complete
             sequence
          Length = 218651

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 236   tatcttacaaaggggtagttaa 257
             ||||||||||||||||||||||
Sbjct: 87341 tatcttacaaaggggtagttaa 87362
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>ref|XM_635234.1| Dictyostelium discoideum phosphotyrosine phosphatase ptp3
           (DDB0214986), partial mRNA
          Length = 2973

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 47  acaacatcaacaacatcaata 67
           |||||||||||||||||||||
Sbjct: 969 acaacatcaacaacatcaata 989
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>gb|AE014825.1| Plasmodium falciparum 3D7 chromosome 14 section 10 of 13 of the complete
              sequence
          Length = 250053

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 212    ttcatttccccttttatttatatct 236
              |||||||||||||||||| ||||||
Sbjct: 160752 ttcatttccccttttattcatatct 160728
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>gb|AC073968.8| Homo sapiens BAC clone RP11-111G20 from 7, complete sequence
          Length = 92245

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 112  aggaacctcacacagggccaa 132
            |||||||||||||||||||||
Sbjct: 4968 aggaacctcacacagggccaa 4948
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>gb|AC145090.1| Pan troglodytes BAC clone RP43-2G11 from 7, complete sequence
          Length = 173759

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 112    aggaacctcacacagggccaa 132
              |||||||||||||||||||||
Sbjct: 113244 aggaacctcacacagggccaa 113224
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>gb|AC165148.2| Mus musculus BAC clone RP24-278K24 from chromosome 14, complete sequence
          Length = 197531

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 208    acacttcatttccccttttatttat 232
              |||||||||||| ||||||||||||
Sbjct: 119629 acacttcatttctccttttatttat 119605
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>gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequence
          Length = 95814

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 47    acaacatcaacaacatcaata 67
             |||||||||||||||||||||
Sbjct: 18640 acaacatcaacaacatcaata 18660
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>emb|BX284112.25| Zebrafish DNA sequence from clone DKEYP-75A7 in linkage group 21,
              complete sequence
          Length = 216476

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 314    cttcttcacacaatcatatac 334
              |||||||||||||||||||||
Sbjct: 121424 cttcttcacacaatcatatac 121404
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>gb|AC151987.4| Mus musculus BAC clone RP23-356C20 from chromosome 17, complete
             sequence
          Length = 245262

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 48    caacatcaacaacatcaatat 68
             |||||||||||||||||||||
Sbjct: 25123 caacatcaacaacatcaatat 25143
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>emb|AL929345.15| Zebrafish DNA sequence from clone DKEY-211H10 in linkage group 23,
              complete sequence
          Length = 222615

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 46     tacaacatcaacaacatcaat 66
              |||||||||||||||||||||
Sbjct: 105871 tacaacatcaacaacatcaat 105891
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>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 215    atttccccttttatttatatc 235
              |||||||||||||||||||||
Sbjct: 636580 atttccccttttatttatatc 636560
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>emb|AL954838.14| Zebrafish DNA sequence from clone DKEY-12B15 in linkage group 23,
              complete sequence
          Length = 268324

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 46     tacaacatcaacaacatcaat 66
              |||||||||||||||||||||
Sbjct: 109497 tacaacatcaacaacatcaat 109517
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>gb|U38197.1|DDU38197 Dictyostelium discoideum protein tyrosine phosphatase (PTP3) mRNA,
           complete cds
          Length = 2970

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 47  acaacatcaacaacatcaata 67
           |||||||||||||||||||||
Sbjct: 966 acaacatcaacaacatcaata 986
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>emb|CT030233.6| Mouse DNA sequence from clone RP24-103C16 on chromosome 14, complete
              sequence
          Length = 216332

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 208    acacttcatttccccttttatttat 232
              |||||||||||| ||||||||||||
Sbjct: 145910 acacttcatttctccttttatttat 145934
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>gb|AC160994.5| Mus musculus BAC clone RP23-101K11 from chromosome 17, complete sequence
          Length = 199856

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 48     caacatcaacaacatcaatat 68
              |||||||||||||||||||||
Sbjct: 120725 caacatcaacaacatcaatat 120745
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>ref|NM_123919.3| Arabidopsis thaliana unknown protein AT5G45510 mRNA, complete cds
          Length = 4185

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 49   aacatcaacaacatcaatatttactagt 76
            |||||||||||| |||| ||||||||||
Sbjct: 2403 aacatcaacaacctcaagatttactagt 2376
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>gb|AC111034.11| Mus musculus chromosome 8, clone RP23-202K1, complete sequence
          Length = 200303

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     cactcacacaatatatatgt 40
              ||||||||||||||||||||
Sbjct: 108674 cactcacacaatatatatgt 108693
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>ref|XM_640002.1| Dictyostelium discoideum hypothetical protein (DDB0217030), partial
           mRNA
          Length = 1959

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 46  tacaacatcaacaacatcaa 65
           ||||||||||||||||||||
Sbjct: 761 tacaacatcaacaacatcaa 780
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>ref|XM_634213.1| Dictyostelium discoideum histidine kinase (DDB0191389), partial mRNA
          Length = 5130

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   tacaacatcaacaacatcaa 65
            ||||||||||||||||||||
Sbjct: 3320 tacaacatcaacaacatcaa 3339
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>ref|XM_630646.1| Dictyostelium discoideum hypothetical protein (DDB0219561), partial
           mRNA
          Length = 1215

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  acaacatcaacaacatcaat 66
           ||||||||||||||||||||
Sbjct: 282 acaacatcaacaacatcaat 301
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>gb|AC165948.2| Mus musculus BAC clone RP24-430M9 from chromosome 17, complete sequence
          Length = 176267

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    ttgtatacaacatcaacaac 60
             ||||||||||||||||||||
Sbjct: 99807 ttgtatacaacatcaacaac 99826
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>gb|AC121146.8| Mus musculus chromosome 3, clone RP24-297G3, complete sequence
          Length = 157105

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    ttcatttccccttttattta 231
              ||||||||||||||||||||
Sbjct: 109206 ttcatttccccttttattta 109187
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>gb|AC139513.10| Mus musculus chromosome 15, clone RP23-151N6, complete sequence
          Length = 238980

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     aatatatatgtttgtataca 49
              ||||||||||||||||||||
Sbjct: 142586 aatatatatgtttgtataca 142567
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>gb|AC008367.5| Drosophila melanogaster clone BACR10P10, complete sequence
          Length = 176231

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 52     atcaacaacatcaatatttactag 75
              ||||||||||| ||||||||||||
Sbjct: 150474 atcaacaacataaatatttactag 150451
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>gb|AC131594.10| Mus musculus chromosome 15, clone RP24-568P18, complete sequence
          Length = 181495

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    cttcattcatgcatgactgt 154
              ||||||||||||||||||||
Sbjct: 122058 cttcattcatgcatgactgt 122077
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>gb|AC115680.3| Dictyostelium discoideum chromosome 2 map 4915084-5005461 strain AX4,
            complete sequence
          Length = 90373

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   tacaacatcaacaacatcaa 65
            ||||||||||||||||||||
Sbjct: 4890 tacaacatcaacaacatcaa 4909
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>emb|CT009574.5| Mouse DNA sequence from clone RP23-140H11 on chromosome 17, complete
             sequence
          Length = 204822

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    aacatcaacaacatcaatat 68
             ||||||||||||||||||||
Sbjct: 80754 aacatcaacaacatcaatat 80735
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>emb|Z70211.1|CEK11E4 Caenorhabditis elegans Cosmid K11E4, complete sequence
          Length = 33995

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    acaacatcaatatttactag 75
             ||||||||||||||||||||
Sbjct: 26299 acaacatcaatatttactag 26280
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>ref|XM_726172.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03270)
           partial mRNA
          Length = 149

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 31  atatatatgtttgtatacaa 50
           ||||||||||||||||||||
Sbjct: 123 atatatatgtttgtatacaa 104
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>gb|AC163214.4| Mus musculus chromosome 5, clone RP23-467O1, complete sequence
          Length = 200882

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 20     tcactcacacaatatatatgtttgtata 47
              |||| |||||||||||||| ||||||||
Sbjct: 138835 tcacacacacaatatatatatttgtata 138862
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>gb|AC166313.2| Medicago truncatula chromosome 7 BAC clone mte1-4j13, complete sequence
          Length = 123373

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     caacatcaacaacatcaata 67
              ||||||||||||||||||||
Sbjct: 100899 caacatcaacaacatcaata 100880
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>emb|AL356118.15| Human DNA sequence from clone RP11-487A2 on chromosome 13, complete
             sequence
          Length = 166245

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 28    acaatatatatgtttgtatacaacatca 55
             |||||||||||||||  |||||||||||
Sbjct: 83126 acaatatatatgtttagatacaacatca 83153
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>gb|AC113558.8| Homo sapiens chromosome 18, clone RP11-1130K19, complete sequence
          Length = 165957

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     atatatatgtttgtatacaa 50
              ||||||||||||||||||||
Sbjct: 116482 atatatatgtttgtatacaa 116463
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>gb|AC125503.3| Oryctolagus cuniculus clone LB1-115H21, complete sequence
          Length = 176296

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     aacatcaatatttactagta 77
              ||||||||||||||||||||
Sbjct: 165599 aacatcaatatttactagta 165618
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>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces
             hansenii
          Length = 1602771

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   ttttatttatatctatctta 242
             ||||||||||||||||||||
Sbjct: 20761 ttttatttatatctatctta 20742
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>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces
            hansenii
          Length = 1349926

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 223  ttttatttatatctatctta 242
            ||||||||||||||||||||
Sbjct: 4503 ttttatttatatctatctta 4484
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>emb|BX323462.11| Zebrafish DNA sequence from clone CH211-225F16 in linkage group 7,
             complete sequence
          Length = 85515

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   cttttatttatatctatctt 241
             ||||||||||||||||||||
Sbjct: 51685 cttttatttatatctatctt 51666
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>emb|CR385022.10| Zebrafish DNA sequence from clone CH211-63C12 in linkage group 23,
             complete sequence
          Length = 163551

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   cttttatttatatctatctt 241
             ||||||||||||||||||||
Sbjct: 89032 cttttatttatatctatctt 89051
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>gb|AC099689.4| Homo sapiens chromosome 18, clone RP11-849I19, complete sequence
          Length = 201519

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    gttaatacatacaaatccat 272
              ||||||||||||||||||||
Sbjct: 170809 gttaatacatacaaatccat 170828
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>emb|BX914218.21| Zebrafish DNA sequence from clone DKEY-80F1 in linkage group 18,
             complete sequence
          Length = 167159

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   cttttatttatatctatctt 241
             ||||||||||||||||||||
Sbjct: 77727 cttttatttatatctatctt 77708
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>gb|AC093335.7| Homo sapiens chromosome 18, clone RP11-850O21, complete sequence
          Length = 105499

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   gttaatacatacaaatccat 272
             ||||||||||||||||||||
Sbjct: 90741 gttaatacatacaaatccat 90722
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>gb|AY102118.1| Arabidopsis thaliana AT5g45510/MFC19_18 mRNA sequence
          Length = 4186

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 49   aacatcaacaacatcaatatttactagt 76
            |||||||||||| |||| ||||||||||
Sbjct: 2405 aacatcaacaacctcaagatttactagt 2378
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>gb|AF362373.2| Dictyostelium discoideum histidine kinase DhkL (dhkL) gene, complete
            cds
          Length = 5729

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   tacaacatcaacaacatcaa 65
            ||||||||||||||||||||
Sbjct: 3487 tacaacatcaacaacatcaa 3506
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>gb|AC093914.3| Homo sapiens BAC clone RP11-779N9 from 4, complete sequence
          Length = 170536

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    acaatatatatgtttgtata 47
             ||||||||||||||||||||
Sbjct: 60366 acaatatatatgtttgtata 60385
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>gb|AY065063.1| Arabidopsis thaliana AT5g45510/MFC19_18 mRNA, complete cds
          Length = 4158

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 49   aacatcaacaacatcaatatttactagt 76
            |||||||||||| |||| ||||||||||
Sbjct: 2400 aacatcaacaacctcaagatttactagt 2373
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>emb|BX890601.10| Zebrafish DNA sequence from clone CH211-51F19 in linkage group 14,
             complete sequence
          Length = 124859

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   acacttcatttcccctttta 227
             ||||||||||||||||||||
Sbjct: 44745 acacttcatttcccctttta 44764
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>gb|AC148762.2| Medicago truncatula chromosome 7 BAC clone mth2-15p5, complete sequence
          Length = 136116

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    caacatcaacaacatcaata 67
             ||||||||||||||||||||
Sbjct: 10037 caacatcaacaacatcaata 10056
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>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold
          Length = 1889755

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 58      aacatcaatatttactagta 77
               ||||||||||||||||||||
Sbjct: 1595043 aacatcaatatttactagta 1595062
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>emb|CR391699.1| Gallus gallus finished cDNA, clone ChEST238k16
          Length = 1004

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 42  tgtatacaacatcaacaacatcaa 65
           |||||||| |||||||||||||||
Sbjct: 605 tgtatacagcatcaacaacatcaa 628
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>emb|BX323593.12| Zebrafish DNA sequence from clone DKEY-107I18 in linkage group 14,
             complete sequence
          Length = 198776

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   cttttatttatatctatctt 241
             ||||||||||||||||||||
Sbjct: 57422 cttttatttatatctatctt 57403
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>gb|AC154441.3| Mus musculus BAC clone RP24-176O5 from chromosome 13, complete sequence
          Length = 169507

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     atatatatgtttgtatacaa 50
              ||||||||||||||||||||
Sbjct: 113478 atatatatgtttgtatacaa 113497
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>gb|AC008207.3|AC008207 Drosophila melanogaster, chromosome 3R, region 96C-96D, BAC clone
              BACR17E12, complete sequence
          Length = 184887

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 52     atcaacaacatcaatatttactag 75
              ||||||||||| ||||||||||||
Sbjct: 157271 atcaacaacataaatatttactag 157294
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>gb|AC008208.5|AC008208 Drosophila melanogaster, chromosome 3R, region 96D-96D, BAC clone
             BACR06L08, complete sequence
          Length = 170220

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 52    atcaacaacatcaatatttactag 75
             ||||||||||| ||||||||||||
Sbjct: 93213 atcaacaacataaatatttactag 93236
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>gb|AC009453.13|AC009453 Homo sapiens chromosome 18, clone RP11-59F14, complete sequence
          Length = 168947

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     atatatatgtttgtatacaa 50
              ||||||||||||||||||||
Sbjct: 114036 atatatatgtttgtatacaa 114055
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>gb|AC122152.3| Oryctolagus cuniculus clone LB1-297M16, complete sequence
          Length = 189392

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    aacatcaatatttactagta 77
             ||||||||||||||||||||
Sbjct: 46840 aacatcaatatttactagta 46859
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>gb|AC108171.3| Homo sapiens chromosome X clone RP11-468J11, RP11-473F11, CTC-775O14
            map q28, complete sequence
          Length = 185708

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 414  cagaaagtctttggtgctac 433
            ||||||||||||||||||||
Sbjct: 4202 cagaaagtctttggtgctac 4183
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>gb|AF282854.4| Homo sapiens chromosome X clone RP11-157E12 map q28, complete sequence
          Length = 187411

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 414    cagaaagtctttggtgctac 433
              ||||||||||||||||||||
Sbjct: 187040 cagaaagtctttggtgctac 187021
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>gb|AF274857.3| Homo sapiens chromosome X clone CTD-2011N23 map q28, complete sequence
          Length = 148527

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 414   cagaaagtctttggtgctac 433
             ||||||||||||||||||||
Sbjct: 18826 cagaaagtctttggtgctac 18807
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>gb|AC016254.14|AC016254 Homo sapiens 12 BAC RP11-394C19 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164331

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    gagcacaggagcaggagata 373
              ||||||||||||||||||||
Sbjct: 147085 gagcacaggagcaggagata 147104
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>gb|AC151273.2| Mus musculus BAC clone RP24-237J7 from chromosome 17, complete sequence
          Length = 143288

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     aacatcaacaacatcaatat 68
              ||||||||||||||||||||
Sbjct: 103483 aacatcaacaacatcaatat 103502
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 386    aacgaaccgtgtcgaaatgg 405
              ||||||||||||||||||||
Sbjct: 352527 aacgaaccgtgtcgaaatgg 352508
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>dbj|AB018113.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFC19
          Length = 85020

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 49    aacatcaacaacatcaatatttactagt 76
             |||||||||||| |||| ||||||||||
Sbjct: 66805 aacatcaacaacctcaagatttactagt 66778
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>gb|AE003751.3| Drosophila melanogaster chromosome 3R, section 89 of 118 of the
             complete sequence
          Length = 307443

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 52    atcaacaacatcaatatttactag 75
             ||||||||||| ||||||||||||
Sbjct: 96949 atcaacaacataaatatttactag 96972
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>emb|AL670689.7| Mouse DNA sequence from clone RP23-269N5 on chromosome X, complete
             sequence
          Length = 195890

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atatatgtttgtatacaaca 52
             ||||||||||||||||||||
Sbjct: 59086 atatatgtttgtatacaaca 59105
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>emb|AL732601.16| Mouse DNA sequence from clone RP23-154J12 on chromosome 2, complete
              sequence
          Length = 192345

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 363    agcaggagatacttgccaga 382
              ||||||||||||||||||||
Sbjct: 185617 agcaggagatacttgccaga 185598
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>gb|AC165951.3| Mus musculus BAC clone RP24-137B13 from chromosome 17, complete
             sequence
          Length = 209191

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    ttgtatacaacatcaacaac 60
             ||||||||||||||||||||
Sbjct: 31706 ttgtatacaacatcaacaac 31687
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>gb|AC116521.15| Mus musculus chromosome 5, clone RP24-343N10, complete sequence
          Length = 169411

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 20     tcactcacacaatatatatgtttgtata 47
              |||| |||||||||||||| ||||||||
Sbjct: 158038 tcacacacacaatatatatatttgtata 158065
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>gb|AC161865.4| Mus musculus chromosome 19, clone RP23-218F7, complete sequence
          Length = 206019

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     cactcacacaatatatatgt 40
              ||||||||||||||||||||
Sbjct: 155454 cactcacacaatatatatgt 155435


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,413,800
Number of Sequences: 3902068
Number of extensions: 5413800
Number of successful extensions: 133946
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 133612
Number of HSP's gapped (non-prelim): 334
length of query: 480
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 458
effective length of database: 17,147,199,772
effective search space: 7853417495576
effective search space used: 7853417495576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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