ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet117e08 |
|---|---|
| Clone Library Name | barley_pub |
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 90.5 bits (223), Expect = 9e-19 Identities = 43/57 (75%), Positives = 45/57 (78%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLFDH+ADPV PG Sbjct: 206 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPG 262
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 89.7 bits (221), Expect = 1e-18 Identities = 42/57 (73%), Positives = 45/57 (78%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLFDH+ADPV PG Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPG 264
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 89.4 bits (220), Expect = 2e-18 Identities = 42/57 (73%), Positives = 45/57 (78%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLFDH+ADPV PG Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVPG 264
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 88.6 bits (218), Expect = 3e-18 Identities = 41/57 (71%), Positives = 45/57 (78%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DH+ADPV PG Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVPG 264
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 88.2 bits (217), Expect = 4e-18 Identities = 41/57 (71%), Positives = 45/57 (78%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DH+ADPV PG Sbjct: 209 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPG 265
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 88.2 bits (217), Expect = 4e-18 Identities = 41/57 (71%), Positives = 45/57 (78%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DH+ADPV PG Sbjct: 93 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPG 149
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 88.2 bits (217), Expect = 4e-18 Identities = 41/57 (71%), Positives = 45/57 (78%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP++NL+DH+ADPV PG Sbjct: 208 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPG 264
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 87.8 bits (216), Expect = 6e-18 Identities = 43/58 (74%), Positives = 46/58 (79%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPGS 212 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLFDH+ DPV APGS Sbjct: 211 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAPGS 268
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 87.0 bits (214), Expect = 1e-17 Identities = 42/57 (73%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV PG Sbjct: 207 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANNAWAFATNFVPG 263
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 87.0 bits (214), Expect = 1e-17 Identities = 43/58 (74%), Positives = 45/58 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPGS 212 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV PG+ Sbjct: 205 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGN 262
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 87.0 bits (214), Expect = 1e-17 Identities = 42/57 (73%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV PG Sbjct: 180 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFVPG 236
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 86.7 bits (213), Expect = 1e-17 Identities = 42/57 (73%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 210 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPG 266
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 86.7 bits (213), Expect = 1e-17 Identities = 42/57 (73%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 210 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPG 266
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 85.9 bits (211), Expect = 2e-17 Identities = 42/57 (73%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 198 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 254
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 85.9 bits (211), Expect = 2e-17 Identities = 42/57 (73%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 207 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 263
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 85.9 bits (211), Expect = 2e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 221 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPG 277
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 85.9 bits (211), Expect = 2e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 217 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPG 273
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 85.9 bits (211), Expect = 2e-17 Identities = 42/57 (73%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 149 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 205
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 85.9 bits (211), Expect = 2e-17 Identities = 42/57 (73%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 212 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 268
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 85.9 bits (211), Expect = 2e-17 Identities = 42/57 (73%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV PG Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPG 266
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 85.9 bits (211), Expect = 2e-17 Identities = 42/57 (73%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV PG Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPG 266
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 85.5 bits (210), Expect = 3e-17 Identities = 42/57 (73%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 199 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATKLCPG 255
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 85.5 bits (210), Expect = 3e-17 Identities = 41/57 (71%), Positives = 43/57 (75%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADP PG Sbjct: 208 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNAWAYATNFTPG 264
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 204 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 260
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 266
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 266
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 266
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 266
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 266
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 207 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 263
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 209 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 265
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 209 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 265
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 209 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 265
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 67 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 123
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 59 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 115
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 264
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 264
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 264
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 264
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 264
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 85.1 bits (209), Expect = 4e-17 Identities = 41/58 (70%), Positives = 45/58 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPGS 212 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG+ Sbjct: 211 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSPPGT 268
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 84.7 bits (208), Expect = 5e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH++DPV PG Sbjct: 211 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPG 267
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 84.7 bits (208), Expect = 5e-17 Identities = 41/57 (71%), Positives = 43/57 (75%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHI DPV PG Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYATNFVPG 264
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 84.7 bits (208), Expect = 5e-17 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPG 266
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 84.3 bits (207), Expect = 6e-17 Identities = 40/57 (70%), Positives = 43/57 (75%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ DPV PG Sbjct: 207 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNNAWAYATNFVPG 263
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 84.3 bits (207), Expect = 6e-17 Identities = 40/57 (70%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQA+VTGKGP+ENL DH+ADPV PG Sbjct: 209 ELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNNAWSYATNFVPG 265
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 84.3 bits (207), Expect = 6e-17 Identities = 40/57 (70%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP++NL DH+ADPV PG Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYATNFVPG 266
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 83.6 bits (205), Expect = 1e-16 Identities = 41/57 (71%), Positives = 43/57 (75%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKELKNGRLAMFSMFGFFV AIVTGKGP+ENL DH+ADPV PG Sbjct: 171 ELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 227
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 83.6 bits (205), Expect = 1e-16 Identities = 41/57 (71%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+E+L DHIADPV PG Sbjct: 209 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFVPG 265
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 83.6 bits (205), Expect = 1e-16 Identities = 40/57 (70%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 EL+VKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 209 ELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 265
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 83.6 bits (205), Expect = 1e-16 Identities = 39/57 (68%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ++KVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 221 DVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPG 277
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 83.6 bits (205), Expect = 1e-16 Identities = 40/57 (70%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ++KVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 208 DVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 264
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 83.6 bits (205), Expect = 1e-16 Identities = 40/57 (70%), Positives = 44/57 (77%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+A+PV PG Sbjct: 188 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNNAWAYATNFVPG 244
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 83.2 bits (204), Expect = 1e-16 Identities = 41/57 (71%), Positives = 43/57 (75%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+A PV PG Sbjct: 206 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPG 262
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 83.2 bits (204), Expect = 1e-16 Identities = 40/57 (70%), Positives = 43/57 (75%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVK +KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV PG Sbjct: 210 ELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 266
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 82.0 bits (201), Expect = 3e-16 Identities = 39/58 (67%), Positives = 44/58 (75%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPGS 212 ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PV PG+ Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGA 265
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 82.0 bits (201), Expect = 3e-16 Identities = 41/57 (71%), Positives = 42/57 (73%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKELK GRLAM SMFGFFVQAIVTGKGP+ENL DHIADPV PG Sbjct: 208 ELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPG 264
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 80.5 bits (197), Expect = 9e-16 Identities = 37/43 (86%), Positives = 40/43 (93%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPV 257 ELKVKE KNGRLAMFSMFGFF+QAIVTGKGP+ENL DH+ DPV Sbjct: 210 ELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPV 252
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 80.1 bits (196), Expect = 1e-15 Identities = 38/57 (66%), Positives = 41/57 (71%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPG 215 ELKVKE+KNGRLAMFS GFFVQAIVTGKGPV+NL DH+ADP PG Sbjct: 196 ELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 79.3 bits (194), Expect = 2e-15 Identities = 36/42 (85%), Positives = 40/42 (95%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADP 260 ELKVKE+KNGRLAMFS FGFFVQAIVTGKGP++NL DH+ADP Sbjct: 199 ELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADP 240
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 77.8 bits (190), Expect = 6e-15 Identities = 37/58 (63%), Positives = 42/58 (72%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPGS 212 ELKVKE+KNGRLA FSMFGFFVQAIVTGKGPV+NL DH+A+P P + Sbjct: 196 ELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTPSA 253
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 75.1 bits (183), Expect = 4e-14 Identities = 34/42 (80%), Positives = 39/42 (92%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADP 260 ELKVKE+KNGRLAMF+ GFFVQAIVTGKGP+ENL DH+A+P Sbjct: 217 ELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANP 258
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 70.1 bits (170), Expect = 1e-12 Identities = 31/41 (75%), Positives = 37/41 (90%) Frame = -2 Query: 382 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADP 260 LKVKE+KNGRLAMF+M GFF+QA VTG+GPVENL H++DP Sbjct: 221 LKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDP 261
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 68.9 bits (167), Expect = 3e-12 Identities = 29/43 (67%), Positives = 38/43 (88%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPV 257 ELK+KE+KNGRLAM ++ G+F+QA+VTG GP +NL DH+ADPV Sbjct: 220 ELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPV 262
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 67.0 bits (162), Expect = 1e-11 Identities = 35/58 (60%), Positives = 39/58 (67%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVXXXXXXXXXXXAPGS 212 ELKVKELKNGRLAMFSMFGFFVQAIV+ K +ENL DH+ V PG+ Sbjct: 211 ELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVPGN 268
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 65.1 bits (157), Expect = 4e-11 Identities = 30/42 (71%), Positives = 34/42 (80%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADP 260 ELKVKE+KNGRLAM M GF+ QAIVTG+GPVEN H+ DP Sbjct: 65 ELKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDP 106
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 58.2 bits (139), Expect = 5e-09 Identities = 25/42 (59%), Positives = 33/42 (78%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADP 260 EL+ KE+KNGRLAM ++ G + Q I TG GP++NLF H+ADP Sbjct: 217 ELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 58.2 bits (139), Expect = 5e-09 Identities = 25/42 (59%), Positives = 33/42 (78%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADP 260 EL+ KE+KNGRLAM ++ G + Q I TG GP++NLF H+ADP Sbjct: 217 ELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 57.4 bits (137), Expect = 8e-09 Identities = 27/42 (64%), Positives = 30/42 (71%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADP 260 E K KEL NGRLAM + GF VQ VTGKGP ENL H++DP Sbjct: 200 EAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDP 241
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 53.1 bits (126), Expect = 2e-07 Identities = 26/43 (60%), Positives = 33/43 (76%), Gaps = 1/43 (2%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPVENLFDHIADP 260 ELKVKE+KNGRLA+ ++ GF V Q+ G GP+ENL H+ADP Sbjct: 187 ELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADP 229
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 50.1 bits (118), Expect = 1e-06 Identities = 23/41 (56%), Positives = 28/41 (68%) Frame = -2 Query: 379 KVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPV 257 K E+KNGRLAM MFG VQ VT +GPV NL +H+ P+ Sbjct: 94 KAAEIKNGRLAMIGMFGLEVQNHVTAQGPVANLIEHLRHPL 134 Score = 43.5 bits (101), Expect = 1e-04 Identities = 19/39 (48%), Positives = 26/39 (66%) Frame = -2 Query: 373 KELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPV 257 +E+KNGRLAM + G Q + TG+ P+ NL H A+PV Sbjct: 284 REIKNGRLAMTGLLGLTFQYLATGESPLANLAAHFANPV 322
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 49.3 bits (116), Expect = 2e-06 Identities = 21/43 (48%), Positives = 31/43 (72%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPV 257 +L++ E+K+ RLAM + GF VQA TGKGP+ N H++DP+ Sbjct: 237 QLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 279
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 48.9 bits (115), Expect = 3e-06 Identities = 21/43 (48%), Positives = 30/43 (69%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPV 257 +L++ E+K+ RLAM GF VQA TGKGP+ N H++DP+ Sbjct: 234 QLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPL 276
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/35 (62%), Positives = 25/35 (71%) Frame = -2 Query: 379 KVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFD 275 K E+KNGRLAM MFG VQ+ VTGK P+ NL D Sbjct: 496 KEAEIKNGRLAMNGMFGLEVQSHVTGKSPINNLID 530 Score = 42.4 bits (98), Expect = 3e-04 Identities = 19/41 (46%), Positives = 27/41 (65%) Frame = -2 Query: 379 KVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPV 257 K E+KNGRLA+ ++ GF VQ V G P+ NL +H+ P+ Sbjct: 123 KEAEIKNGRLALTALLGFEVQRHVVGGSPLANLAEHLQQPL 163 Score = 41.6 bits (96), Expect = 5e-04 Identities = 17/41 (41%), Positives = 28/41 (68%) Frame = -2 Query: 379 KVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPV 257 + E+KNGRLA+ ++ G Q + TG+ P+ NL H+A+P+ Sbjct: 311 RAAEVKNGRLALTAVAGLTAQYLATGESPLANLSAHLANPI 351
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 38.5 bits (88), Expect = 0.004 Identities = 18/34 (52%), Positives = 25/34 (73%) Frame = -2 Query: 382 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENL 281 LK E+K+ RLAM S FG+ VQA+ TG+G + +L Sbjct: 233 LKTAEIKHARLAMVSFFGYGVQALSTGEGALGSL 266
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 36.2 bits (82), Expect = 0.020 Identities = 18/34 (52%), Positives = 23/34 (67%) Frame = -2 Query: 382 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENL 281 LK+ E+K+ RLAM + F +QA TGKGPV L Sbjct: 238 LKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFL 271
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 34.7 bits (78), Expect = 0.057 Identities = 17/39 (43%), Positives = 24/39 (61%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHI 269 EL+ KEL NGRLAM ++ GF +Q + P +F H+ Sbjct: 200 ELQTKELNNGRLAMIAIAGFVLQEVAE---PGVEIFQHL 235
>TRPC2_RAT (Q9R283) Short transient receptor potential channel 2 (TrpC2)| (rTRP2) Length = 885 Score = 31.6 bits (70), Expect = 0.48 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +3 Query: 186 RRMAAKHI*LPGAKLVAKAHALLFTGSAMWSKRFSTGPFPVTMACTK 326 RR+ A+ G K+ K+ +L F S++ RF+ G P+T+AC K Sbjct: 111 RRLLARLEREKGRKVDTKSFSLAFFDSSIDGSRFAPGVTPLTLACQK 157
>TRPC2_MOUSE (Q9R244) Short transient receptor potential channel 2 (TrpC2)| (mTrp2) Length = 1172 Score = 31.6 bits (70), Expect = 0.48 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +3 Query: 186 RRMAAKHI*LPGAKLVAKAHALLFTGSAMWSKRFSTGPFPVTMACTK 326 RR+ A+ G K+ K+ +L F S++ RF+ G P+T+AC K Sbjct: 395 RRLLARLEREKGRKVDTKSFSLAFFDSSIDGSRFAPGVTPLTLACQK 441
>PRM2_RATFU (Q91VE1) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 105 Score = 31.2 bits (69), Expect = 0.63 Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 2/86 (2%) Frame = -1 Query: 380 QGQGAQERPPRHVLHVRLLRAGHRHRKGTG*EPLRPHRRPSEQQRVGLRHQLRPRKLNVF 201 QGQG + P R + R R HRHR+ + R H+R R R R+ Sbjct: 26 QGQGQELSPERVEDYGRTHRGHHRHRRCSRKRLHRIHKR---------RRSCRRRR---- 72 Query: 200 SSHPSVHRTRY--ACVLVRRGSTCSC 129 H HR R+ C RR C C Sbjct: 73 -RHSCCHRRRHRRGCRRSRRRRRCKC 97
>SYFA_TROW8 (Q83HH3) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 336 Score = 30.8 bits (68), Expect = 0.82 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Frame = +2 Query: 2 THNPSIHSLVHTLCSINLHCAQLGRG---HLARSMMMIQINTQSTCSYTLIHDVQVHMHI 172 TH P H L +C N+ L +G LAR + ++N + C+Y + I Sbjct: 208 THTPVFHQLEGLVCDRNITLGHL-KGTVEDLARYLFGAEVNLRMRCNYFPFTEPSAEFDI 266 Query: 173 SSDG 184 S DG Sbjct: 267 SRDG 270
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -2 Query: 382 LKVKELKNGRLAMFSMFGFFVQAIVTG 302 ++ KEL +GRLAM + GF Q V+G Sbjct: 170 MQEKELSHGRLAMIAAAGFLAQEAVSG 196
>UVRA_CHLTR (O84337) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 1786 Score = 28.9 bits (63), Expect = 3.1 Identities = 22/66 (33%), Positives = 30/66 (45%) Frame = +2 Query: 11 PSIHSLVHTLCSINLHCAQLGRGHLARSMMMIQINTQSTCSYTLIHDVQVHMHISSDGQT 190 PSIH + TLC++ L LGR + S IQ + +Y L+ V+ D T Sbjct: 780 PSIHQKIETLCTLGLQYLPLGRPLYSLSGGEIQ---RLKLAYELLAPVKHPTLYVLDEPT 836 Query: 191 DGC*TH 208 G TH Sbjct: 837 TGLHTH 842
>PYRB_BIFLO (Q8G655) Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate| transcarbamylase) (ATCase) Length = 326 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Frame = +2 Query: 2 THNPSIHSLVHTLCSI-NLHCAQLGRGHLARSMMMI-QINTQSTCSYTLIHDV 154 T ++HSL+ TLC N+ + L +I +IN +CSY + D+ Sbjct: 167 TFGRTVHSLIETLCRFGNVRFVLISPDELKTPQYVIDRINATDSCSYVEVRDL 219
>GALT5_HUMAN (Q7Z7M9) Polypeptide N-acetylgalactosaminyltransferase 5 (EC| 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 5) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 5) (Polypeptide GalNAc transferase 5) (GalNAc-T5) (pp-GaNTase 5) Length = 940 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = -1 Query: 311 RHRKGTG*EPLRPHRRPSEQQRVGLRHQLRPRKLNVFSSHPS 186 R+R L PHR P Q L L P K+N+ + PS Sbjct: 361 RNRSEMSSSSLAPHRVPLSQTNHALTGGLEPAKINITAKAPS 402
>UVRA_CHLPN (Q9Z985) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 1826 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +2 Query: 8 NPSIHSLVHTLCSINLHCAQLGR 76 +P IH +H LCS+ L LGR Sbjct: 781 HPKIHEKIHALCSLRLDYLPLGR 803
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 28.1 bits (61), Expect = 5.3 Identities = 24/78 (30%), Positives = 33/78 (42%) Frame = -1 Query: 365 QERPPRHVLHVRLLRAGHRHRKGTG*EPLRPHRRPSEQQRVGLRHQLRPRKLNVFSSHPS 186 + R P H R RHR + P RRPS ++R R + PR++ P Sbjct: 289 RSRSPSHT------RPRRRHRSRS--RSYSPRRRPSPRRRPSPRRRTPPRRM----PPPP 336 Query: 185 VHRTRYACVLVRRGSTCS 132 HR + V RR S+ S Sbjct: 337 RHRRSRSPVRRRRRSSAS 354
>CAC1C_RABIT (P15381) Voltage-dependent L-type calcium channel alpha-1C subunit| (Voltage-gated calcium channel alpha subunit Cav1.2) (Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle) (Smooth muscle calcium channel blocker receptor) Length = 2171 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +2 Query: 104 IQINTQSTCSYTLIHDVQV-HMHISSDGQTDG 196 + T+STC T++H+ Q+ H +IS G G Sbjct: 20 LSAETESTCKGTVVHEAQLNHFYISPGGSNYG 51
>GFI1_DROME (Q9N658) Zinc finger protein sens (Protein senseless)| Length = 541 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = -1 Query: 272 HRRPSEQQRVGLRHQLRPRKLNVFSSHPSVHRTRYACVLVRRGSTCS 132 H++P +QQ+ L HQ +P++ H H A + RR S+ S Sbjct: 356 HQQPQQQQQQQLHHQQQPQQ----HQHQQQHPDSTATDVARRSSSSS 398
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 28.1 bits (61), Expect = 5.3 Identities = 24/78 (30%), Positives = 33/78 (42%) Frame = -1 Query: 365 QERPPRHVLHVRLLRAGHRHRKGTG*EPLRPHRRPSEQQRVGLRHQLRPRKLNVFSSHPS 186 + R P H R RHR + P RRPS ++R R + PR++ P Sbjct: 289 RSRSPSHT------RPRRRHRSRS--RSYSPRRRPSPRRRPSPRRRTPPRRM----PPPP 336 Query: 185 VHRTRYACVLVRRGSTCS 132 HR + V RR S+ S Sbjct: 337 RHRRSRSPVRRRRRSSAS 354
>SYFA_TROWT (Q83GS9) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 336 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%) Frame = +2 Query: 2 THNPSIHSLVHTLCSINLHCAQLGRG---HLARSMMMIQINTQSTCSYTLIHDVQVHMHI 172 TH P H L +C N+ L +G LA + ++N + C+Y + I Sbjct: 208 THTPVFHQLEGLVCDRNITLGHL-KGTVEDLAGYLFGAEVNLRMRCNYFPFTEPSAEFDI 266 Query: 173 SSDG 184 S DG Sbjct: 267 SRDG 270
>SIRB2_ECOLI (Q46755) Protein sirB2| Length = 130 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +3 Query: 213 LPGAKLVAKAHALLFTGSAMW 275 L G L+AKAH L F+G A W Sbjct: 54 LSGIALMAKAHILPFSGQAQW 74
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = -2 Query: 382 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPV 290 LKV E+K+ RLAM +M F+ +A GK P+ Sbjct: 222 LKVAEIKHARLAMLAMLIFYFEA-GQGKTPL 251
>RECN_XYLFT (Q87BS5) DNA repair protein recN (Recombination protein N)| Length = 557 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = +2 Query: 17 IHSLVHTLCSINLHCAQLGRGHLARSMMMIQINTQSTCSYTLIHDVQV 160 +H+ HTL +N H A+LG MIQ++ T + +D+ + Sbjct: 245 LHAARHTLSRVNEHDARLGEVETLLDNAMIQVDEALTLLDRIHNDLNI 292
>CU086_HUMAN (P59089) Protein C21orf86| Length = 165 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 10/48 (20%) Frame = -1 Query: 386 RAQGQGAQERPPRHVLHVRLLRAGH----------RHRKGTG*EPLRP 273 R + Q + RP R + V+LL G RHR+G+G +P P Sbjct: 20 RQRPQATERRPRRERMFVKLLLEGKLPPTLNTPVSRHRQGSGHKPASP 67
>OPA1_ONCMA (O93248) Dynamin-like 120 kDa protein, mitochondrial precursor| (120-kDa G protein expressed in motor neurons) (mG120) Length = 971 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -2 Query: 379 KVKELKNGRLAMFSMFGFFVQAIVTGKGPVENLFDHIAD 263 +++++ G+L G+F A+VTGKG D I D Sbjct: 492 RIQQIVEGKLFPMKALGYF--AVVTGKGSAGESIDSIKD 528
>CCAC_AMPCA (P55738) Caroteno-chlorophyll a-c binding protein (Fragment)| Length = 102 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = -2 Query: 385 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 293 +L E+K+GR+AM + G+ Q I TGK P Sbjct: 31 KLAQTEIKHGRVAMLATMGYITQEI-TGKLP 60
>RL17_RICCN (Q92GZ1) 50S ribosomal protein L17| Length = 136 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -1 Query: 239 LRHQLRPRKLNVFSSHPSVHRTRYACVLV 153 +RH+++ RKLN+ SSH A LV Sbjct: 1 MRHKIKGRKLNITSSHRQAMLANMAVALV 29
>SYG_LEIXX (Q6AHF7) Glycyl-tRNA synthetase (EC 6.1.1.14) (Glycine--tRNA| ligase) (GlyRS) Length = 463 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/48 (29%), Positives = 23/48 (47%) Frame = +1 Query: 52 FTLRTARERASRSLDDDDTNKHTKYVQLHVDPRRTSTHAYLVRWTDGW 195 F L+T E + + L D NK+ +YV ++P T A + D + Sbjct: 294 FDLKTHIEHSGKDLSYFDQNKNERYVPFVIEPSFGLTRALMAFLVDAY 341
>CBX8_MOUSE (Q9QXV1) Chromobox protein homolog 8 (Polycomb 3 homolog) (Pc3)| (MPc3) Length = 362 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -1 Query: 287 EPLRPHRRPSEQQRVGLRHQLRPRKLNVFSS 195 EPL P +RP + GL L+ RKL+ SS Sbjct: 179 EPLDPSQRPLGEPSAGLGEYLKGRKLDETSS 209
>ODO1_ECOLI (P0AFG3) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 933 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = +2 Query: 149 DVQVHMHISSDGQTDGC*THL 211 DV+ HM SSD QTDG HL Sbjct: 294 DVKYHMGFSSDFQTDGGLVHL 314
>ODO1_ECOL6 (P0AFG4) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 933 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = +2 Query: 149 DVQVHMHISSDGQTDGC*THL 211 DV+ HM SSD QTDG HL Sbjct: 294 DVKYHMGFSSDFQTDGGLVHL 314
>ODO1_ECO57 (P0AFG5) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 933 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = +2 Query: 149 DVQVHMHISSDGQTDGC*THL 211 DV+ HM SSD QTDG HL Sbjct: 294 DVKYHMGFSSDFQTDGGLVHL 314 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,761,338 Number of Sequences: 219361 Number of extensions: 938614 Number of successful extensions: 2839 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 2781 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2835 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
