ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet117e07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_481110.1| Oryza sativa (japonica cultivar-group), mRNA 62 2e-06
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
3dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
4ref|XM_481109.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.025
5dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.099
6dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.099
7gb|AC095281.6| Rattus norvegicus 4 BAC CH230-10M16 (Children's H... 44 0.39
8ref|XM_481105.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
9ref|XM_507182.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 1.5
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.5
11gb|AC117263.4| Mus musculus BAC clone RP24-547F18 from chromosom... 42 1.5
12gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
13gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.5
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
16gb|AC092686.3| Homo sapiens BAC clone RP11-767C16 from 2, comple... 42 1.5
17dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
18dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
19dbj|AK107532.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
20dbj|AK104291.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
21dbj|AK069029.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
22dbj|AK060990.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
23gb|AC150276.2| Mus musculus BAC clone RP23-177G19 from 19, compl... 42 1.5
24gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
25gb|AC135420.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
26gb|AY217351.1| Manihot esculenta cytochrome P450 protein CYP71E ... 40 6.1
27gb|AC164642.3| Mus musculus BAC clone RP23-248L4 from chromosome... 40 6.1
28emb|AL162742.9| Human DNA sequence from clone RP11-127L20 on chr... 40 6.1
29gb|AC164636.4| Mus musculus BAC clone RP23-70P16 from chromosome... 40 6.1
30gb|AC159820.2| Mus musculus BAC clone RP23-158K20 from chromosom... 40 6.1
31gb|AC097505.2| Homo sapiens BAC clone RP11-362J17 from 4, comple... 40 6.1
32gb|AC016582.9| Homo sapiens chromosome 19 clone CTD-2554C21, com... 40 6.1
33dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
34dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
35dbj|AP006054.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
36dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
37gb|AC007676.19|AC007676 Homo sapiens, clone RP11-9B17, complete ... 40 6.1
38gb|AC149787.2| Gallus gallus BAC clone TAM31-60B9 from chromosom... 40 6.1
39dbj|AP004926.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 6.1
40emb|AJ297131.1|MMAJ2971 Mus musculus SIL, MAP_17, CYP_a, SCL & C... 40 6.1
41emb|AL645473.12| Mouse DNA sequence from clone RP23-246H17 on ch... 40 6.1
42emb|AL731651.1| Mouse DNA sequence from clone XX-PAC129 on chrom... 40 6.1 
>ref|XM_481110.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1503

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 109/135 (80%)
 Strand = Plus / Minus

                                                                        
Query: 229  gcccgtcaaccagctccacatcgaagttccacaccattgccgcgacaatagtattcatct 288
            ||||||| |||| |||||| ||||||||||||||||  || ||  | || || |||||||
Sbjct: 1445 gcccgtccaccacctccacgtcgaagttccacaccaccgcggccgcgatggtcttcatct 1386

                                                                        
Query: 289  gcataaatgagatgtccttgccaaggcaaatcctcgggccggagctgaatgccaaaaatt 348
            |||| |  | ||||  ||||||  |||| |||||||| |||||| |||| ||||| || |
Sbjct: 1385 gcatcacggcgatgctcttgccggggcacatcctcggcccggagttgaacgccaagaact 1326

                           
Query: 349  tgtgagacggcacgt 363
            |||| ||||||||||
Sbjct: 1325 tgtgcgacggcacgt 1311
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 109/135 (80%)
 Strand = Plus / Plus

                                                                           
Query: 229     gcccgtcaaccagctccacatcgaagttccacaccattgccgcgacaatagtattcatct 288
               ||||||| |||| |||||| ||||||||||||||||  || ||  | || || |||||||
Sbjct: 9952688 gcccgtccaccacctccacgtcgaagttccacaccaccgcggccgcgatggtcttcatct 9952747

                                                                           
Query: 289     gcataaatgagatgtccttgccaaggcaaatcctcgggccggagctgaatgccaaaaatt 348
               |||| |  | ||||  ||||||  |||| |||||||| |||||| |||| ||||| || |
Sbjct: 9952748 gcatcacggcgatgctcttgccggggcacatcctcggcccggagttgaacgccaagaact 9952807

                              
Query: 349     tgtgagacggcacgt 363
               |||| ||||||||||
Sbjct: 9952808 tgtgcgacggcacgt 9952822



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 229     gcccgtcaaccagctccacatcgaagttccacacca 264
               ||||||| |||| |||||| ||||||||||||||||
Sbjct: 9950879 gcccgtccaccacctccacgtcgaagttccacacca 9950914



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 107/135 (79%)
 Strand = Plus / Minus

                                                                            
Query: 237      accagctccacatcgaagttccacaccattgccgcgacaatagtattcatctgcataaat 296
                |||| |||||| ||||||||||||||||  || ||| | || || |||||| |||| |  
Sbjct: 10046597 accatctccacgtcgaagttccacaccaccgcggcggcgatggtcttcatcagcatcacg 10046538

                                                                            
Query: 297      gagatgtccttgccaaggcaaatcctcgggccggagctgaatgccaaaaatttgtgagac 356
                | ||||  ||||||  |||| |||||||  |||||| |||| ||||  || ||||| |||
Sbjct: 10046537 gcgatgctcttgccggggcacatcctcgccccggagttgaacgccaggaacttgtgcgac 10046478

                               
Query: 357      ggcacgtaccgcagc 371
                ||||||| |||||||
Sbjct: 10046477 ggcacgtgccgcagc 10046463



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                        
Query: 159     cgcttcttcagcttcaccatgagcccatttttcatgtgcag 199
               |||||||||| ||||||||||| ||| || ||||| |||||
Sbjct: 9916738 cgcttcttcaccttcaccatgaccccgttcttcatctgcag 9916698
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>dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBb0005C03
          Length = 166423

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 109/135 (80%)
 Strand = Plus / Plus

                                                                          
Query: 229    gcccgtcaaccagctccacatcgaagttccacaccattgccgcgacaatagtattcatct 288
              ||||||| |||| |||||| ||||||||||||||||  || ||  | || || |||||||
Sbjct: 99935  gcccgtccaccacctccacgtcgaagttccacaccaccgcggccgcgatggtcttcatct 99994

                                                                          
Query: 289    gcataaatgagatgtccttgccaaggcaaatcctcgggccggagctgaatgccaaaaatt 348
              |||| |  | ||||  ||||||  |||| |||||||| |||||| |||| ||||| || |
Sbjct: 99995  gcatcacggcgatgctcttgccggggcacatcctcggcccggagttgaacgccaagaact 100054

                             
Query: 349    tgtgagacggcacgt 363
              |||| ||||||||||
Sbjct: 100055 tgtgcgacggcacgt 100069



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 229   gcccgtcaaccagctccacatcgaagttccacacca 264
             ||||||| |||| |||||| ||||||||||||||||
Sbjct: 98126 gcccgtccaccacctccacgtcgaagttccacacca 98161



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 159   cgcttcttcagcttcaccatgagcccatttttcatgtgcag 199
             |||||||||| ||||||||||| ||| || ||||| |||||
Sbjct: 63985 cgcttcttcaccttcaccatgaccccgttcttcatctgcag 63945
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>ref|XM_481109.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 195

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 229 gcccgtcaaccagctccacatcgaagttccacacca 264
           ||||||| |||| |||||| ||||||||||||||||
Sbjct: 137 gcccgtccaccacctccacgtcgaagttccacacca 102
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>dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1127C04
          Length = 121441

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 107/135 (79%)
 Strand = Plus / Minus

                                                                         
Query: 237   accagctccacatcgaagttccacaccattgccgcgacaatagtattcatctgcataaat 296
             |||| |||||| ||||||||||||||||  || ||| | || || |||||| |||| |  
Sbjct: 86499 accatctccacgtcgaagttccacaccaccgcggcggcgatggtcttcatcagcatcacg 86440

                                                                         
Query: 297   gagatgtccttgccaaggcaaatcctcgggccggagctgaatgccaaaaatttgtgagac 356
             | ||||  ||||||  |||| |||||||  |||||| |||| ||||  || ||||| |||
Sbjct: 86439 gcgatgctcttgccggggcacatcctcgccccggagttgaacgccaggaacttgtgcgac 86380

                            
Query: 357   ggcacgtaccgcagc 371
             ||||||| |||||||
Sbjct: 86379 ggcacgtgccgcagc 86365
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>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OSJNBa0023I13
          Length = 165911

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 107/135 (79%)
 Strand = Plus / Minus

                                                                        
Query: 237  accagctccacatcgaagttccacaccattgccgcgacaatagtattcatctgcataaat 296
            |||| |||||| ||||||||||||||||  || ||| | || || |||||| |||| |  
Sbjct: 5943 accatctccacgtcgaagttccacaccaccgcggcggcgatggtcttcatcagcatcacg 5884

                                                                        
Query: 297  gagatgtccttgccaaggcaaatcctcgggccggagctgaatgccaaaaatttgtgagac 356
            | ||||  ||||||  |||| |||||||  |||||| |||| ||||  || ||||| |||
Sbjct: 5883 gcgatgctcttgccggggcacatcctcgccccggagttgaacgccaggaacttgtgcgac 5824

                           
Query: 357  ggcacgtaccgcagc 371
            ||||||| |||||||
Sbjct: 5823 ggcacgtgccgcagc 5809
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>gb|AC095281.6| Rattus norvegicus 4 BAC CH230-10M16 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 228330

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 374    cttgccatcctctgagagccatctat 399
              ||||| ||||||||||||||||||||
Sbjct: 162097 cttgctatcctctgagagccatctat 162072
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>ref|XM_481105.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1694

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 159  cgcttcttcagcttcaccatgagcccatttttcatgtgcag 199
            |||||||||| ||||||||||| ||| || ||||| |||||
Sbjct: 1557 cgcttcttcaccttcaccatgaccccgttcttcatctgcag 1517
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>ref|XM_507182.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0005C03.18
            mRNA
          Length = 1697

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 159  cgcttcttcagcttcaccatgagcccatttttcatgtgcag 199
            |||||||||| ||||||||||| ||| || ||||| |||||
Sbjct: 1560 cgcttcttcaccttcaccatgaccccgttcttcatctgcag 1520
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                           
Query: 303     tccttgccaaggcaaatcctcgggccggagctgaatgccaaaaatttgtgagacggcacg 362
               |||||||| |||||  ||||||| |||||| |||| || |  || ||||  |||||||||
Sbjct: 2206603 tccttgccgaggcatgtcctcggcccggagttgaacgcgacgaacttgttcgacggcacg 2206544

                        
Query: 363     taccgcagc 371
               |||||||||
Sbjct: 2206543 taccgcagc 2206535
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>gb|AC117263.4| Mus musculus BAC clone RP24-547F18 from chromosome 19, complete sequence
          Length = 201607

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 113    cacacaagatacaaataagaaaagg 137
              |||| ||||||||||||||||||||
Sbjct: 198973 cacagaagatacaaataagaaaagg 198997
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>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0030C11, complete sequence
          Length = 156647

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                         
Query: 303   tccttgccaaggcaaatcctcgggccggagctgaatgccaaaaatttgtgagacggcacg 362
             |||||||| |||||  ||||||| |||||| |||| || |  || ||||  |||||||||
Sbjct: 96897 tccttgccgaggcatgtcctcggcccggagttgaacgcgacgaacttgttcgacggcacg 96838

                      
Query: 363   taccgcagc 371
             |||||||||
Sbjct: 96837 taccgcagc 96829
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>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0081A17, from chromosome 3, complete sequence
          Length = 134821

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                          
Query: 303    tccttgccaaggcaaatcctcgggccggagctgaatgccaaaaatttgtgagacggcacg 362
              |||||||| |||||  ||||||| |||||| |||| || |  || ||||  |||||||||
Sbjct: 119453 tccttgccgaggcatgtcctcggcccggagttgaacgcgacgaacttgttcgacggcacg 119512

                       
Query: 363    taccgcagc 371
              |||||||||
Sbjct: 119513 taccgcagc 119521
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                           
Query: 303     tccttgccaaggcaaatcctcgggccggagctgaatgccaaaaatttgtgagacggcacg 362
               |||||||| |||||  ||||||| |||||| |||| || |  || ||||  |||||||||
Sbjct: 2206615 tccttgccgaggcatgtcctcggcccggagttgaacgcgacgaacttgttcgacggcacg 2206556

                        
Query: 363     taccgcagc 371
               |||||||||
Sbjct: 2206555 taccgcagc 2206547
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 302      gtccttgccaaggcaaatcctcgggccgg 330
                ||||||||| |||||||||||||| ||||
Sbjct: 27082205 gtccttgccgaggcaaatcctcggcccgg 27082233
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>gb|AC092686.3| Homo sapiens BAC clone RP11-767C16 from 2, complete sequence
          Length = 117755

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 114   acacaagatacaaataagaaa 134
             |||||||||||||||||||||
Sbjct: 45877 acacaagatacaaataagaaa 45857
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>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1486_E07
          Length = 110494

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 302   gtccttgccaaggcaaatcctcgggccgg 330
             ||||||||| |||||||||||||| ||||
Sbjct: 53854 gtccttgccgaggcaaatcctcggcccgg 53882
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>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0461B08
          Length = 153743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 302    gtccttgccaaggcaaatcctcgggccgg 330
              ||||||||| |||||||||||||| ||||
Sbjct: 135407 gtccttgccgaggcaaatcctcggcccgg 135435
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>dbj|AK107532.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-G12, full
           insert sequence
          Length = 1935

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                       
Query: 303 tccttgccaaggcaaatcctcgggccggagctgaatgccaaaaatttgtgagacggcacg 362
           |||||||| |||||  ||||||| |||||| |||| || |  || ||||  |||||||||
Sbjct: 212 tccttgccgaggcatgtcctcggcccggagttgaacgcgacgaacttgttcgacggcacg 271

                    
Query: 363 taccgcagc 371
           |||||||||
Sbjct: 272 taccgcagc 280
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>dbj|AK104291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F05, full
            insert sequence
          Length = 1694

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 159  cgcttcttcagcttcaccatgagcccatttttcatgtgcag 199
            |||||||||| ||||||||||| ||| || ||||| |||||
Sbjct: 1557 cgcttcttcaccttcaccatgaccccgttcttcatctgcag 1517
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>dbj|AK069029.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E06, full
            insert sequence
          Length = 2118

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 302  gtccttgccaaggcaaatcctcgggccgg 330
            ||||||||| |||||||||||||| ||||
Sbjct: 1523 gtccttgccgaggcaaatcctcggcccgg 1495
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>dbj|AK060990.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C11, full
            insert sequence
          Length = 1697

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 159  cgcttcttcagcttcaccatgagcccatttttcatgtgcag 199
            |||||||||| ||||||||||| ||| || ||||| |||||
Sbjct: 1560 cgcttcttcaccttcaccatgaccccgttcttcatctgcag 1520
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>gb|AC150276.2| Mus musculus BAC clone RP23-177G19 from 19, complete sequence
          Length = 221528

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 113    cacacaagatacaaataagaaaagg 137
              |||| ||||||||||||||||||||
Sbjct: 103969 cacagaagatacaaataagaaaagg 103945
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>gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0093E24, complete sequence
          Length = 146492

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  atacaaataagaaaaggagg 140
            ||||||||||||||||||||
Sbjct: 3856 atacaaataagaaaaggagg 3875
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>gb|AC135420.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0060G17,
              complete sequence
          Length = 174949

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    atacaaataagaaaaggagg 140
              ||||||||||||||||||||
Sbjct: 171214 atacaaataagaaaaggagg 171233
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>gb|AY217351.1| Manihot esculenta cytochrome P450 protein CYP71E (c15) mRNA, complete
            cds
          Length = 1840

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 394  atctatctgggttatactcc 413
            ||||||||||||||||||||
Sbjct: 1301 atctatctgggttatactcc 1282
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>gb|AC164642.3| Mus musculus BAC clone RP23-248L4 from chromosome 6, complete sequence
          Length = 212166

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 116    acaagatacaaataagaaaaggag 139
              |||||||||||||| |||||||||
Sbjct: 208166 acaagatacaaataggaaaaggag 208189
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>emb|AL162742.9| Human DNA sequence from clone RP11-127L20 on chromosome 10 Contains the
             gene for a novel glutathione-S-transferase
             gene(LOC119391), a novel gene (KIAA1754), the 5'end of a
             novel gene (FLJ35908), two novel genes and two CpG
             islands, complete sequence
          Length = 178428

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 434   gtcttccattctccccatgg 453
             ||||||||||||||||||||
Sbjct: 89455 gtcttccattctccccatgg 89474
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>gb|AC164636.4| Mus musculus BAC clone RP23-70P16 from chromosome 6, complete sequence
          Length = 212096

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 116    acaagatacaaataagaaaaggag 139
              |||||||||||||| |||||||||
Sbjct: 154488 acaagatacaaataggaaaaggag 154465
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>gb|AC159820.2| Mus musculus BAC clone RP23-158K20 from chromosome 9, complete sequence
          Length = 215017

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 382    cctctgagagccatctatct 401
              ||||||||||||||||||||
Sbjct: 170332 cctctgagagccatctatct 170313
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>gb|AC097505.2| Homo sapiens BAC clone RP11-362J17 from 4, complete sequence
          Length = 184043

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     ttattatagcaaaacattcg 51
              ||||||||||||||||||||
Sbjct: 172966 ttattatagcaaaacattcg 172947
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>gb|AC016582.9| Homo sapiens chromosome 19 clone CTD-2554C21, complete sequence
          Length = 188712

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   aaatgagatgtccttgccaa 312
             ||||||||||||||||||||
Sbjct: 33310 aaatgagatgtccttgccaa 33329
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 121      atacaaataagaaaaggagg 140
                ||||||||||||||||||||
Sbjct: 11432426 atacaaataagaaaaggagg 11432445
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 121     atacaaataagaaaaggagg 140
               ||||||||||||||||||||
Sbjct: 8081623 atacaaataagaaaaggagg 8081642
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>dbj|AP006054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0417E03
          Length = 133019

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  atacaaataagaaaaggagg 140
            ||||||||||||||||||||
Sbjct: 1669 atacaaataagaaaaggagg 1688
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>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1386G10
          Length = 121827

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    atacaaataagaaaaggagg 140
              ||||||||||||||||||||
Sbjct: 120135 atacaaataagaaaaggagg 120154
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>gb|AC007676.19|AC007676 Homo sapiens, clone RP11-9B17, complete sequence
          Length = 152138

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 293    aaatgagatgtccttgccaa 312
              ||||||||||||||||||||
Sbjct: 102181 aaatgagatgtccttgccaa 102200
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>gb|AC149787.2| Gallus gallus BAC clone TAM31-60B9 from chromosome ul, complete
             sequence
          Length = 146640

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 63    ttatagcagtacacatacaaatac 86
             ||||| ||||||||||||||||||
Sbjct: 34905 ttataccagtacacatacaaatac 34882
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>dbj|AP004926.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13P22, TM0079c,
              complete sequence
          Length = 109022

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    caagatacaaataagaaaag 136
              ||||||||||||||||||||
Sbjct: 101246 caagatacaaataagaaaag 101227
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>emb|AJ297131.1|MMAJ2971 Mus musculus SIL, MAP_17, CYP_a, SCL & CYP_b genes
          Length = 234411

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 116    acaagatacaaataagaaaaggag 139
              ||||||||||||||||| ||||||
Sbjct: 216985 acaagatacaaataagacaaggag 217008
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>emb|AL645473.12| Mouse DNA sequence from clone RP23-246H17 on chromosome 4, complete
              sequence
          Length = 162757

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 116    acaagatacaaataagaaaaggag 139
              ||||||||||||||||| ||||||
Sbjct: 122533 acaagatacaaataagacaaggag 122556
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>emb|AL731651.1| Mouse DNA sequence from clone XX-PAC129 on chromosome 4, complete
              sequence
          Length = 147323

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 116    acaagatacaaataagaaaaggag 139
              ||||||||||||||||| ||||||
Sbjct: 129897 acaagatacaaataagacaaggag 129920


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,073,212
Number of Sequences: 3902068
Number of extensions: 4073212
Number of successful extensions: 82043
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 81756
Number of HSP's gapped (non-prelim): 288
length of query: 454
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 432
effective length of database: 17,147,199,772
effective search space: 7407590301504
effective search space used: 7407590301504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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